RNA–Protein interactions for RNA: ENST00000373909.7

RPA2-202, Transcript of replication protein A2, humanhuman

TSL 3 BASIC

Gene RPA2, Length 1,162 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA2-202ENST00000373909 NISCHQ9Y2I1 1504 aa42.14■■■■■ 4.34
RPA2-202ENST00000373909 CCDC180Q9P1Z9 1646 aa37.18■■■■□ 3.54
RPA2-202ENST00000373909 ABCC9O60706 1549 aa36.01■■■■□ 3.36
RPA2-202ENST00000373909 ZCCHC6Q5VYS8 1495 aaKnown RBP35.19■■■■□ 3.22
RPA2-202ENST00000373909 DCAF8L2P0C7V8 631 aa35.04■■■■□ 3.2
RPA2-202ENST00000373909 NACADO15069 1562 aa34.87■■■■□ 3.17
RPA2-202ENST00000373909 DCAF1Q9Y4B6 1507 aa34.86■■■■□ 3.17
RPA2-202ENST00000373909 MYO15BQ96JP2 1530 aa34.81■■■■□ 3.16
RPA2-202ENST00000373909 RB1CC1Q8TDY2 1594 aa34.78■■■■□ 3.16
RPA2-202ENST00000373909 UNC13AQ9UPW8 1703 aa34.04■■■■□ 3.04
RPA2-202ENST00000373909 SCRIBQ14160 1630 aa34.01■■■■□ 3.03
RPA2-202ENST00000373909 BICRAQ9NZM4 1560 aa33.8■■■■□ 3
RPA2-202ENST00000373909 PABPN1Q86U42 306 aaKnown RBP eCLIP33.78■■■■□ 3
RPA2-202ENST00000373909 SHROOM4Q9ULL8 1493 aa33.6■■■□□ 2.97
RPA2-202ENST00000373909 CECR2Q9BXF3 1484 aa32.83■■■□□ 2.85
RPA2-202ENST00000373909 EIF4G1Q04637 1599 aaKnown RBP32.82■■■□□ 2.84
RPA2-202ENST00000373909 DNAJC5BQ9UF47 199 aa32.74■■■□□ 2.83
RPA2-202ENST00000373909 BAZ1AQ9NRL2 1556 aaPredicted RBP32.58■■■□□ 2.81
RPA2-202ENST00000373909 CC2D2AQ9P2K1 1620 aa32.58■■■□□ 2.81
RPA2-202ENST00000373909 SMARCA4P51532 1647 aa32.57■■■□□ 2.8
RPA2-202ENST00000373909 MROH2BQ7Z745 1585 aa32.51■■■□□ 2.79
RPA2-202ENST00000373909 ATAD2BQ9ULI0 1458 aa32.31■■■□□ 2.76
RPA2-202ENST00000373909 RSF1Q96T23 1441 aaPredicted RBP32.31■■■□□ 2.76
RPA2-202ENST00000373909 PEG3Q9GZU2 1588 aa32.25■■■□□ 2.75
RPA2-202ENST00000373909 SMARCA2P51531 1590 aa32.23■■■□□ 2.75
RPA2-202ENST00000373909 NCAPD3P42695 1498 aa32.22■■■□□ 2.75
RPA2-202ENST00000373909 WIZO95785 1651 aa32.17■■■□□ 2.74
RPA2-202ENST00000373909 HMGXB3Q12766 1538 aa32.05■■■□□ 2.72
RPA2-202ENST00000373909 BAZ1BQ9UIG0 1483 aaKnown RBP32.03■■■□□ 2.72
RPA2-202ENST00000373909 SUPT5HO00267 1087 aaKnown RBP31.86■■■□□ 2.69
RPA2-202ENST00000373909 TOP2AP11388 1531 aaKnown RBP31.82■■■□□ 2.68
RPA2-202ENST00000373909 CCDC88BA6NC98 1476 aa31.5■■■□□ 2.63
RPA2-202ENST00000373909 NESP48681 1621 aa31.33■■■□□ 2.61
RPA2-202ENST00000373909 CADPSQ9ULU8 1353 aa31.3■■■□□ 2.6
RPA2-202ENST00000373909 LAMC3Q9Y6N6 1575 aa31.24■■■□□ 2.59
RPA2-202ENST00000373909 CFTRP13569 1480 aa31.21■■■□□ 2.59
RPA2-202ENST00000373909 PDS5BQ9NTI5 1447 aa31.02■■■□□ 2.56
RPA2-202ENST00000373909 PRDM2Q13029 1718 aa30.93■■■□□ 2.54
RPA2-202ENST00000373909 ERCC6Q03468 1493 aa30.93■■■□□ 2.54
RPA2-202ENST00000373909 FANCD2Q9BXW9 1451 aa30.92■■■□□ 2.54
RPA2-202ENST00000373909 KIF21AQ7Z4S6 1674 aa30.92■■■□□ 2.54
RPA2-202ENST00000373909 CEP164Q9UPV0 1460 aa30.81■■■□□ 2.52
RPA2-202ENST00000373909 THOC2Q8NI27 1593 aaKnown RBP30.7■■■□□ 2.5
RPA2-202ENST00000373909 MRC2Q9UBG0 1479 aa30.68■■■□□ 2.5
RPA2-202ENST00000373909 URB2Q14146 1524 aaKnown RBP30.62■■■□□ 2.49
RPA2-202ENST00000373909 WDR62O43379 1518 aa30.57■■■□□ 2.48
RPA2-202ENST00000373909 TOPBP1Q92547 1522 aa30.49■■■□□ 2.47
RPA2-202ENST00000373909 ABCC8Q09428 1581 aa30.48■■■□□ 2.47
RPA2-202ENST00000373909 DNMBPQ6XZF7 1577 aa30.46■■■□□ 2.47
RPA2-202ENST00000373909 CUX1P39880 1505 aa30.45■■■□□ 2.47
RPA2-202ENST00000373909 CUX2O14529 1486 aa30.44■■■□□ 2.46
RPA2-202ENST00000373909 WRNQ14191 1432 aaPredicted RBP eCLIP30.41■■■□□ 2.46
RPA2-202ENST00000373909 SYNJ1O43426 1573 aa30.33■■■□□ 2.45
RPA2-202ENST00000373909 TOP2BQ02880 1626 aa30.29■■■□□ 2.44
RPA2-202ENST00000373909 POLA1P09884 1462 aaPredicted RBP30.27■■■□□ 2.44
RPA2-202ENST00000373909 BIVM-ERCC5R4GMW8 1640 aa30.27■■■□□ 2.44
RPA2-202ENST00000373909 FGD5Q6ZNL6 1462 aa30.26■■■□□ 2.44
RPA2-202ENST00000373909 RAD54L2Q9Y4B4 1467 aa30.17■■■□□ 2.42
RPA2-202ENST00000373909 SOGA1O94964 1423 aa30.16■■■□□ 2.42
RPA2-202ENST00000373909 IFT140Q96RY7 1462 aa30.16■■■□□ 2.42
RPA2-202ENST00000373909 TARBP1Q13395 1621 aaKnown RBP30.13■■■□□ 2.41
RPA2-202ENST00000373909 CHIC1Q5VXU3 224 aa30.04■■■□□ 2.4
RPA2-202ENST00000373909 TRIM41Q8WV44 630 aa30.04■■■□□ 2.4
RPA2-202ENST00000373909 ZNF608Q9ULD9 1512 aaPredicted RBP30.04■■■□□ 2.4
RPA2-202ENST00000373909 ABCA10Q8WWZ4 1543 aa29.98■■■□□ 2.39
RPA2-202ENST00000373909 WDR97A6NE52 1622 aa29.96■■■□□ 2.39
RPA2-202ENST00000373909 TDRD9Q8NDG6 1382 aaKnown RBP29.96■■■□□ 2.39
RPA2-202ENST00000373909 AQRO60306 1485 aaKnown RBP eCLIP29.93■■■□□ 2.389e-6■■□□□ 13.1
RPA2-202ENST00000373909 EIF4G3O43432 1585 aaKnown RBP29.88■■■□□ 2.37
RPA2-202ENST00000373909 ABCA5Q8WWZ7 1642 aa29.82■■■□□ 2.36
RPA2-202ENST00000373909 GAPVD1Q14C86 1478 aa29.8■■■□□ 2.36
RPA2-202ENST00000373909 KIF27Q86VH2 1401 aa29.72■■■□□ 2.35
RPA2-202ENST00000373909 GRIN2BQ13224 1484 aa29.72■■■□□ 2.35
RPA2-202ENST00000373909 RUSC2Q8N2Y8 1516 aa29.7■■■□□ 2.34
RPA2-202ENST00000373909 PBRM1Q86U86 1689 aa29.67■■■□□ 2.34
RPA2-202ENST00000373909 SNAPC4Q5SXM2 1469 aa29.62■■■□□ 2.33
RPA2-202ENST00000373909 IGF1RP08069 1367 aa29.62■■■□□ 2.33
RPA2-202ENST00000373909 ERICH3Q5RHP9 1530 aa29.61■■■□□ 2.33
RPA2-202ENST00000373909 MAGI1Q96QZ7 1491 aaPredicted RBP29.57■■■□□ 2.32
RPA2-202ENST00000373909 ADAMTS12P58397 1594 aa29.47■■■□□ 2.31
RPA2-202ENST00000373909 FHAD1B1AJZ9 1412 aa29.47■■■□□ 2.31
RPA2-202ENST00000373909 SYNJ2O15056 1496 aa29.47■■■□□ 2.31
RPA2-202ENST00000373909 FBLN2P98095 1184 aa29.45■■■□□ 2.31
RPA2-202ENST00000373909 EEA1Q15075 1411 aa29.45■■■□□ 2.3
RPA2-202ENST00000373909 FAM9AQ8IZU1 332 aaPredicted RBP29.44■■■□□ 2.3
RPA2-202ENST00000373909 CHMP7Q8WUX9 453 aaPredicted RBP29.44■■■□□ 2.3
RPA2-202ENST00000373909 CSRNP3Q8WYN3 585 aa29.42■■■□□ 2.3
RPA2-202ENST00000373909 CHD1O14646 1710 aa29.42■■■□□ 2.3
RPA2-202ENST00000373909 CARMIL1Q5VZK9 1371 aa29.41■■■□□ 2.3
RPA2-202ENST00000373909 CUL7Q14999 1698 aa29.4■■■□□ 2.3
RPA2-202ENST00000373909 GRIN2AQ12879 1464 aa29.35■■■□□ 2.29
RPA2-202ENST00000373909 OSCARQ8IYS5 282 aa29.32■■■□□ 2.28
RPA2-202ENST00000373909 PRXQ9BXM0 1461 aa29.31■■■□□ 2.28
RPA2-202ENST00000373909 RAPGEF2Q9Y4G8 1499 aa29.27■■■□□ 2.28
RPA2-202ENST00000373909 NUP160Q12769 1436 aa29.21■■■□□ 2.27
RPA2-202ENST00000373909 CEP170Q5SW79 1584 aa29.2■■■□□ 2.26
RPA2-202ENST00000373909 CLASP1Q7Z460 1538 aa29.13■■■□□ 2.25
RPA2-202ENST00000373909 KIF21BO75037 1637 aa29.12■■■□□ 2.25
RPA2-202ENST00000373909 DNAJC5Q9H3Z4 198 aa29.05■■■□□ 2.24
RPA2-202ENST00000373909 KIAA0586Q9BVV6 1533 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms