RNA–Protein interactions for RNA: ENST00000633956.1

SORT1-210, Transcript of sortilin 1, humanhuman

TSL 4

Gene SORT1, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-210ENST00000633956 AEBP2Q6ZN18 517 aaPredicted RBP13.38□□□□□ -0.27
SORT1-210ENST00000633956 CHIC1Q5VXU3 224 aa12.58□□□□□ -0.4
SORT1-210ENST00000633956 NISCHQ9Y2I1 1504 aa12.43□□□□□ -0.42
SORT1-210ENST00000633956 SENP3Q9H4L4 574 aaPredicted RBP11.3□□□□□ -0.6
SORT1-210ENST00000633956 PHF23Q9BUL5 403 aaPredicted RBP11.2□□□□□ -0.62
SORT1-210ENST00000633956 CCDC180Q9P1Z9 1646 aa10.8□□□□□ -0.68
SORT1-210ENST00000633956 FOXD1Q16676 465 aa10.62□□□□□ -0.71
SORT1-210ENST00000633956 ZCCHC6Q5VYS8 1495 aaKnown RBP10.44□□□□□ -0.74
SORT1-210ENST00000633956 DCAF8L2P0C7V8 631 aa10.32□□□□□ -0.76
SORT1-210ENST00000633956 ABCC9O60706 1549 aa10.28□□□□□ -0.76
SORT1-210ENST00000633956 DCAF1Q9Y4B6 1507 aa10.24□□□□□ -0.77
SORT1-210ENST00000633956 SHROOM4Q9ULL8 1493 aa10.23□□□□□ -0.77
SORT1-210ENST00000633956 MYO15BQ96JP2 1530 aa10.1□□□□□ -0.79
SORT1-210ENST00000633956 NACADO15069 1562 aa10.06□□□□□ -0.8
SORT1-210ENST00000633956 SCRIBQ14160 1630 aa10□□□□□ -0.81
SORT1-210ENST00000633956 RB1CC1Q8TDY2 1594 aa9.99□□□□□ -0.81
SORT1-210ENST00000633956 PLPPR3Q6T4P5 718 aa9.97□□□□□ -0.81
SORT1-210ENST00000633956 PPP6R1Q9UPN7 881 aa9.93□□□□□ -0.82
SORT1-210ENST00000633956 MSH5O43196 834 aa9.87□□□□□ -0.83
SORT1-210ENST00000633956 ADRA2BP18089 450 aa9.85□□□□□ -0.83
SORT1-210ENST00000633956 PIAS4Q8N2W9 510 aaPredicted RBP9.83□□□□□ -0.84
SORT1-210ENST00000633956 SUPT5HO00267 1087 aaKnown RBP9.82□□□□□ -0.84
SORT1-210ENST00000633956 POTEDQ86YR6 584 aa9.82□□□□□ -0.84
SORT1-210ENST00000633956 UNC13AQ9UPW8 1703 aa9.79□□□□□ -0.84
SORT1-210ENST00000633956 PABPN1Q86U42 306 aaKnown RBP eCLIP9.71□□□□□ -0.86
SORT1-210ENST00000633956 BICRAQ9NZM4 1560 aa9.71□□□□□ -0.86
SORT1-210ENST00000633956 CECR2Q9BXF3 1484 aa9.69□□□□□ -0.86
SORT1-210ENST00000633956 RSF1Q96T23 1441 aaPredicted RBP9.66□□□□□ -0.86
SORT1-210ENST00000633956 MROH2BQ7Z745 1585 aa9.63□□□□□ -0.87
SORT1-210ENST00000633956 BAZ1AQ9NRL2 1556 aaPredicted RBP9.58□□□□□ -0.88
SORT1-210ENST00000633956 SMARCA4P51532 1647 aa9.56□□□□□ -0.88
SORT1-210ENST00000633956 WIZO95785 1651 aa9.55□□□□□ -0.88
SORT1-210ENST00000633956 TOP2AP11388 1531 aaKnown RBP9.43□□□□□ -0.9
SORT1-210ENST00000633956 EIF4G1Q04637 1599 aaKnown RBP9.41□□□□□ -0.9
SORT1-210ENST00000633956 PEG3Q9GZU2 1588 aa9.41□□□□□ -0.9
SORT1-210ENST00000633956 ATAD2BQ9ULI0 1458 aa9.4□□□□□ -0.9
SORT1-210ENST00000633956 SMARCA2P51531 1590 aa9.37□□□□□ -0.91
SORT1-210ENST00000633956 CCDC88BA6NC98 1476 aa9.35□□□□□ -0.91
SORT1-210ENST00000633956 BAZ1BQ9UIG0 1483 aaKnown RBP9.34□□□□□ -0.91
SORT1-210ENST00000633956 NCAPD3P42695 1498 aa9.3□□□□□ -0.92
SORT1-210ENST00000633956 CC2D2AQ9P2K1 1620 aa9.28□□□□□ -0.92
SORT1-210ENST00000633956 HMGXB3Q12766 1538 aa9.28□□□□□ -0.92
SORT1-210ENST00000633956 TRIM41Q8WV44 630 aa9.2□□□□□ -0.94
SORT1-210ENST00000633956 ABCC8Q09428 1581 aa9.17□□□□□ -0.94
SORT1-210ENST00000633956 CFTRP13569 1480 aa9.1□□□□□ -0.95
SORT1-210ENST00000633956 MAPK8IP2Q13387 824 aaPredicted RBP9.09□□□□□ -0.95
SORT1-210ENST00000633956 DNAJC5BQ9UF47 199 aa9.09□□□□□ -0.95
SORT1-210ENST00000633956 WRNQ14191 1432 aaPredicted RBP eCLIP9.08□□□□□ -0.96
SORT1-210ENST00000633956 FAM9AQ8IZU1 332 aaPredicted RBP9.08□□□□□ -0.96
SORT1-210ENST00000633956 CADPSQ9ULU8 1353 aa9.08□□□□□ -0.96
SORT1-210ENST00000633956 LOC105371045A0A1W2PR82 267 aa9.06□□□□□ -0.96
SORT1-210ENST00000633956 SYNJ1O43426 1573 aa9.06□□□□□ -0.96
SORT1-210ENST00000633956 PRDM2Q13029 1718 aa9.03□□□□□ -0.96
SORT1-210ENST00000633956 NESP48681 1621 aa9.02□□□□□ -0.96
SORT1-210ENST00000633956 SOGA1O94964 1423 aa9□□□□□ -0.97
SORT1-210ENST00000633956 DMRT2Q9Y5R5 561 aa9□□□□□ -0.97
SORT1-210ENST00000633956 TOP2BQ02880 1626 aa9□□□□□ -0.97
SORT1-210ENST00000633956 CUX1P39880 1505 aa9□□□□□ -0.97
SORT1-210ENST00000633956 BIVM-ERCC5R4GMW8 1640 aa8.99□□□□□ -0.97
SORT1-210ENST00000633956 FANCD2Q9BXW9 1451 aa8.98□□□□□ -0.97
SORT1-210ENST00000633956 EHMT2Q96KQ7 1210 aa8.98□□□□□ -0.97
SORT1-210ENST00000633956 RUSC2Q8N2Y8 1516 aa8.98□□□□□ -0.97
SORT1-210ENST00000633956 LAMC3Q9Y6N6 1575 aa8.98□□□□□ -0.97
SORT1-210ENST00000633956 EEA1Q15075 1411 aa8.94□□□□□ -0.98
SORT1-210ENST00000633956 CEP164Q9UPV0 1460 aa8.92□□□□□ -0.98
SORT1-210ENST00000633956 CSRNP3Q8WYN3 585 aa8.92□□□□□ -0.98
SORT1-210ENST00000633956 PDS5BQ9NTI5 1447 aa8.91□□□□□ -0.98
SORT1-210ENST00000633956 DNMBPQ6XZF7 1577 aa8.9□□□□□ -0.99
SORT1-210ENST00000633956 TOPBP1Q92547 1522 aa8.9□□□□□ -0.99
SORT1-210ENST00000633956 FGD5Q6ZNL6 1462 aa8.89□□□□□ -0.99
SORT1-210ENST00000633956 SCAF1Q9H7N4 1312 aaKnown RBP8.89□□□□□ -0.99
SORT1-210ENST00000633956 KIF21AQ7Z4S6 1674 aa8.89□□□□□ -0.99
SORT1-210ENST00000633956 URB2Q14146 1524 aaKnown RBP8.88□□□□□ -0.99
SORT1-210ENST00000633956 KIF27Q86VH2 1401 aa8.85□□□□□ -0.99
SORT1-210ENST00000633956 CUX2O14529 1486 aa8.84□□□□□ -0.99
SORT1-210ENST00000633956 POLA1P09884 1462 aaPredicted RBP8.84□□□□□ -0.99
SORT1-210ENST00000633956 RAD54L2Q9Y4B4 1467 aa8.84□□□□□ -0.99
SORT1-210ENST00000633956 KIF21BO75037 1637 aa8.83□□□□□ -1
SORT1-210ENST00000633956 GOLGA3Q08378 1498 aa8.83□□□□□ -1
SORT1-210ENST00000633956 UBTFP17480 764 aaKnown RBP8.82□□□□□ -1
SORT1-210ENST00000633956 MRC2Q9UBG0 1479 aa8.82□□□□□ -1
SORT1-210ENST00000633956 TNIKQ9UKE5 1360 aa8.81□□□□□ -1
SORT1-210ENST00000633956 RAPGEF2Q9Y4G8 1499 aa8.81□□□□□ -1
SORT1-210ENST00000633956 ABCA10Q8WWZ4 1543 aa8.8□□□□□ -1
SORT1-210ENST00000633956 ERCC6Q03468 1493 aa8.79□□□□□ -1
SORT1-210ENST00000633956 PRXQ9BXM0 1461 aa8.79□□□□□ -1
SORT1-210ENST00000633956 IGF1RP08069 1367 aa8.78□□□□□ -1
SORT1-210ENST00000633956 CEP162Q5TB80 1403 aa8.78□□□□□ -1
SORT1-210ENST00000633956 WDR97A6NE52 1622 aa8.77□□□□□ -1.01
SORT1-210ENST00000633956 WDR62O43379 1518 aa8.76□□□□□ -1.01
SORT1-210ENST00000633956 ERICH3Q5RHP9 1530 aa8.76□□□□□ -1.01
SORT1-210ENST00000633956 PPP4R3CPQ6ZMV5 832 aa8.76□□□□□ -1.01
SORT1-210ENST00000633956 CARMIL1Q5VZK9 1371 aa8.74□□□□□ -1.01
SORT1-210ENST00000633956 TDRD9Q8NDG6 1382 aaKnown RBP8.74□□□□□ -1.01
SORT1-210ENST00000633956 THOC2Q8NI27 1593 aaKnown RBP8.74□□□□□ -1.01
SORT1-210ENST00000633956 TARBP1Q13395 1621 aaKnown RBP8.74□□□□□ -1.01
SORT1-210ENST00000633956 ABCA5Q8WWZ7 1642 aa8.73□□□□□ -1.01
SORT1-210ENST00000633956 RANGAP1P46060 587 aaPredicted RBP8.72□□□□□ -1.01
SORT1-210ENST00000633956 GAPVD1Q14C86 1478 aa8.71□□□□□ -1.01
SORT1-210ENST00000633956 CLIP1P30622 1438 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms