RNA–Protein interactions for RNA: ENST00000483831.1

ABCB1-206, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 3

Gene ABCB1, Length 642 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-206ENST00000483831 AEBP2Q6ZN18 517 aaPredicted RBP31.03■■■□□ 2.56
ABCB1-206ENST00000483831 CHIC1Q5VXU3 224 aa29.1■■■□□ 2.25
ABCB1-206ENST00000483831 SENP3Q9H4L4 574 aaPredicted RBP26.65■■□□□ 1.86
ABCB1-206ENST00000483831 PHF23Q9BUL5 403 aaPredicted RBP26.18■■□□□ 1.78
ABCB1-206ENST00000483831 FOXD1Q16676 465 aa24.85■■□□□ 1.57
ABCB1-206ENST00000483831 POTEDQ86YR6 584 aa23.88■■□□□ 1.41
ABCB1-206ENST00000483831 MSH5O43196 834 aa23.55■■□□□ 1.36
ABCB1-206ENST00000483831 PIAS4Q8N2W9 510 aaPredicted RBP23.11■■□□□ 1.29
ABCB1-206ENST00000483831 PLPPR3Q6T4P5 718 aa22.93■■□□□ 1.26
ABCB1-206ENST00000483831 PPP6R1Q9UPN7 881 aa22.77■■□□□ 1.24
ABCB1-206ENST00000483831 ADRA2BP18089 450 aa22.68■■□□□ 1.22
ABCB1-206ENST00000483831 DMRT2Q9Y5R5 561 aa21.03■□□□□ 0.96
ABCB1-206ENST00000483831 MAPK8IP2Q13387 824 aaPredicted RBP20.98■□□□□ 0.95
ABCB1-206ENST00000483831 SCAF1Q9H7N4 1312 aaKnown RBP20.86■□□□□ 0.93
ABCB1-206ENST00000483831 CACNB1Q02641 598 aaPredicted RBP20.53■□□□□ 0.88
ABCB1-206ENST00000483831 DCAF8L1A6NGE4 600 aa20.19■□□□□ 0.82
ABCB1-206ENST00000483831 HOXD11P31277 338 aaPredicted RBP20.03■□□□□ 0.8
ABCB1-206ENST00000483831 PPP4R3CPQ6ZMV5 832 aa20■□□□□ 0.79
ABCB1-206ENST00000483831 RNF39Q9H2S5 420 aa19.99■□□□□ 0.79
ABCB1-206ENST00000483831 CNKSR2Q8WXI2 1034 aa19.78■□□□□ 0.76
ABCB1-206ENST00000483831 RNF216Q9NWF9 866 aaPredicted RBP19.75■□□□□ 0.75
ABCB1-206ENST00000483831 C1QBPQ07021 282 aaKnown RBP19.71■□□□□ 0.75
ABCB1-206ENST00000483831 DNAJC5BQ9UF47 199 aa19.5■□□□□ 0.71
ABCB1-206ENST00000483831 NCBP3Q53F19 620 aaKnown RBP19.12■□□□□ 0.65
ABCB1-206ENST00000483831 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.1■□□□□ 0.65
ABCB1-206ENST00000483831 NPM3O75607 178 aaKnown RBP18.76■□□□□ 0.59
ABCB1-206ENST00000483831 POTEHQ6S545 545 aa18.62■□□□□ 0.57
ABCB1-206ENST00000483831 U3KPZ7 1027 aaPredicted RBP18.6■□□□□ 0.57
ABCB1-206ENST00000483831 DSG3P32926 999 aa18.53■□□□□ 0.56
ABCB1-206ENST00000483831 CAPN15O75808 1086 aa18.52■□□□□ 0.56
ABCB1-206ENST00000483831 SPINK5Q9NQ38 1064 aaPredicted RBP18.48■□□□□ 0.55
ABCB1-206ENST00000483831 APLP2Q06481 763 aa18.14■□□□□ 0.49
ABCB1-206ENST00000483831 TRHP20396 242 aaPredicted RBP18.08■□□□□ 0.48
ABCB1-206ENST00000483831 ZNF219Q9P2Y4 722 aaPredicted RBP18.06■□□□□ 0.48
ABCB1-206ENST00000483831 SLC4A2P04920 1241 aa18.04■□□□□ 0.48
ABCB1-206ENST00000483831 ABCB7O75027 752 aa18.01■□□□□ 0.47
ABCB1-206ENST00000483831 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.96■□□□□ 0.47
ABCB1-206ENST00000483831 HNRNPUL2Q1KMD3 747 aaKnown RBP17.96■□□□□ 0.47
ABCB1-206ENST00000483831 KCNA4P22459 653 aa17.88■□□□□ 0.45
ABCB1-206ENST00000483831 SAMD1Q6SPF0 538 aaPredicted RBP17.81■□□□□ 0.44
ABCB1-206ENST00000483831 RBM42Q9BTD8 480 aaKnown RBP17.77■□□□□ 0.44
ABCB1-206ENST00000483831 CHRDL2Q6WN34 429 aa17.55■□□□□ 0.4
ABCB1-206ENST00000483831 POLA2Q14181 598 aa17.46■□□□□ 0.39
ABCB1-206ENST00000483831 MYCNP04198 464 aaPredicted RBP17.41■□□□□ 0.38
ABCB1-206ENST00000483831 AKT1S1Q96B36 256 aa17.21■□□□□ 0.35
ABCB1-206ENST00000483831 SP7Q8TDD2 431 aaPredicted RBP17.2■□□□□ 0.34
ABCB1-206ENST00000483831 ZBTB12Q9Y330 459 aaPredicted RBP17.14■□□□□ 0.33
ABCB1-206ENST00000483831 REM2Q8IYK8 340 aaPredicted RBP17.02■□□□□ 0.32
ABCB1-206ENST00000483831 PIP4P2Q8N4L2 257 aa17■□□□□ 0.31
ABCB1-206ENST00000483831 ATF5Q9Y2D1 282 aaPredicted RBP16.97■□□□□ 0.31
ABCB1-206ENST00000483831 OSCARQ8IYS5 282 aa16.91■□□□□ 0.3
ABCB1-206ENST00000483831 FOXD4L1Q9NU39 408 aa16.91■□□□□ 0.3
ABCB1-206ENST00000483831 HAX1O00165 279 aa16.87■□□□□ 0.29
ABCB1-206ENST00000483831 PITPNM1O00562 1244 aa16.83■□□□□ 0.28
ABCB1-206ENST00000483831 FXR2P51116 673 aaKnown RBP eCLIP16.82■□□□□ 0.28
ABCB1-206ENST00000483831 SLC4A1APQ9BWU0 796 aaKnown RBP16.81■□□□□ 0.28
ABCB1-206ENST00000483831 EVX2Q03828 476 aa16.54■□□□□ 0.24
ABCB1-206ENST00000483831 SPDYE2BA6NHP3 402 aa16.52■□□□□ 0.24
ABCB1-206ENST00000483831 SPDYE6P0CI01 402 aa16.52■□□□□ 0.24
ABCB1-206ENST00000483831 SPDYE2Q495Y8 402 aa16.52■□□□□ 0.24
ABCB1-206ENST00000483831 ATXN8OSP0DMR3 200 aa16.48■□□□□ 0.23
ABCB1-206ENST00000483831 FBLN2P98095 1184 aa16.46■□□□□ 0.23
ABCB1-206ENST00000483831 PRKAR2AP13861 404 aaKnown RBP16.41■□□□□ 0.22
ABCB1-206ENST00000483831 ZBTB22O15209 634 aa16.39■□□□□ 0.21
ABCB1-206ENST00000483831 SPDYE1Q8NFV5 336 aaPredicted RBP16.38■□□□□ 0.21
ABCB1-206ENST00000483831 CLEC11AQ9Y240 323 aa16.35■□□□□ 0.21
ABCB1-206ENST00000483831 C19orf67A6NJJ6 358 aa16.3■□□□□ 0.2
ABCB1-206ENST00000483831 ZNF692Q9BU19 519 aaPredicted RBP16.22■□□□□ 0.19
ABCB1-206ENST00000483831 SSUH2Q9Y2M2 353 aa16.21■□□□□ 0.19
ABCB1-206ENST00000483831 GABBR2O75899 941 aa16.19■□□□□ 0.18
ABCB1-206ENST00000483831 MKRN4PQ13434 485 aaPredicted RBP16.17■□□□□ 0.18
ABCB1-206ENST00000483831 LHX8Q68G74 356 aa16.12■□□□□ 0.17
ABCB1-206ENST00000483831 CHADLQ6NUI6 762 aa16.06■□□□□ 0.16
ABCB1-206ENST00000483831 PRR29P0C7W0 189 aa16.03■□□□□ 0.16
ABCB1-206ENST00000483831 PABPN1Q86U42 306 aaKnown RBP eCLIP15.96■□□□□ 0.15
ABCB1-206ENST00000483831 CD44P16070 742 aaKnown RBP15.86■□□□□ 0.13
ABCB1-206ENST00000483831 CLCN6P51797 869 aa15.83■□□□□ 0.12
ABCB1-206ENST00000483831 FARP1Q9Y4F1 1045 aaPredicted RBP15.81■□□□□ 0.12
ABCB1-206ENST00000483831 POTEIP0CG38 1075 aa15.8■□□□□ 0.12
ABCB1-206ENST00000483831 DCBLD2Q96PD2 775 aa15.68■□□□□ 0.1
ABCB1-206ENST00000483831 ZNF579Q8NAF0 562 aaKnown RBP15.59■□□□□ 0.09
ABCB1-206ENST00000483831 PLSCR2Q9NRY7 297 aa15.55■□□□□ 0.08
ABCB1-206ENST00000483831 ZRANB1Q9UGI0 708 aa15.55■□□□□ 0.08
ABCB1-206ENST00000483831 CREBZFQ9NS37 354 aa15.46■□□□□ 0.07
ABCB1-206ENST00000483831 STAG3Q9UJ98 1225 aa15.45■□□□□ 0.06
ABCB1-206ENST00000483831 GALR2O43603 387 aaPredicted RBP15.41■□□□□ 0.06
ABCB1-206ENST00000483831 PAK3O75914 559 aaPredicted RBP15.35■□□□□ 0.05
ABCB1-206ENST00000483831 OTUD5Q96G74 571 aa15.35■□□□□ 0.05
ABCB1-206ENST00000483831 POTEB2H3BUK9 544 aa15.27■□□□□ 0.04
ABCB1-206ENST00000483831 PHF12Q96QT6 1004 aa15.26■□□□□ 0.03
ABCB1-206ENST00000483831 NPM1P06748 294 aaKnown RBP eCLIP15.22■□□□□ 0.03
ABCB1-206ENST00000483831 POTEMA6NI47 508 aa15.21■□□□□ 0.03
ABCB1-206ENST00000483831 SPDYE4A6NLX3 237 aa15.18■□□□□ 0.02
ABCB1-206ENST00000483831 CSRNP3Q8WYN3 585 aa15.16■□□□□ 0.02
ABCB1-206ENST00000483831 PELP1Q8IZL8 1130 aaKnown RBP15.15■□□□□ 0.02
ABCB1-206ENST00000483831 POTEGQ6S5H5 508 aa15.14■□□□□ 0.01
ABCB1-206ENST00000483831 MNX1P50219 401 aaPredicted RBP15.09■□□□□ 0.01
ABCB1-206ENST00000483831 ASTLQ6HA08 431 aaPredicted RBP15.07■□□□□ 0
ABCB1-206ENST00000483831 METRNQ9UJH8 293 aa15.07■□□□□ 0
ABCB1-206ENST00000483831 SLC39A7Q92504 469 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms