Protein–RNA interactions for Protein: O75556

SCGB2A1, Mammaglobin-B, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB2A1O75556 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SCGB2A1O75556 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.27■■□□□ 1
SCGB2A1O75556 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SCGB2A1O75556 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.26■□□□□ 0.99
SCGB2A1O75556 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCGB2A1O75556 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SCGB2A1O75556 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC21.24■□□□□ 0.99
SCGB2A1O75556 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SCGB2A1O75556 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SCGB2A1O75556 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.23■□□□□ 0.99
SCGB2A1O75556 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SCGB2A1O75556 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCGB2A1O75556 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC21.21■□□□□ 0.99
SCGB2A1O75556 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCGB2A1O75556 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC21.2■□□□□ 0.98
SCGB2A1O75556 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCGB2A1O75556 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCGB2A1O75556 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SCGB2A1O75556 AL031258.1-201ENST00000623562 325 ntBASIC21.19■□□□□ 0.98
SCGB2A1O75556 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCGB2A1O75556 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCGB2A1O75556 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.18■□□□□ 0.98
SCGB2A1O75556 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCGB2A1O75556 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCGB2A1O75556 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
SCGB2A1O75556 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SCGB2A1O75556 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCGB2A1O75556 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCGB2A1O75556 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SCGB2A1O75556 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.15■□□□□ 0.98
SCGB2A1O75556 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCGB2A1O75556 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
SCGB2A1O75556 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SCGB2A1O75556 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCGB2A1O75556 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCGB2A1O75556 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCGB2A1O75556 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCGB2A1O75556 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCGB2A1O75556 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SCGB2A1O75556 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SCGB2A1O75556 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SCGB2A1O75556 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SCGB2A1O75556 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21.08■□□□□ 0.97
SCGB2A1O75556 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SCGB2A1O75556 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SCGB2A1O75556 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SCGB2A1O75556 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.07■□□□□ 0.96
SCGB2A1O75556 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.07■□□□□ 0.96
SCGB2A1O75556 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SCGB2A1O75556 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SCGB2A1O75556 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCGB2A1O75556 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCGB2A1O75556 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.04■□□□□ 0.96
SCGB2A1O75556 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SCGB2A1O75556 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCGB2A1O75556 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCGB2A1O75556 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SCGB2A1O75556 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
SCGB2A1O75556 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.03■□□□□ 0.96
SCGB2A1O75556 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCGB2A1O75556 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.02■□□□□ 0.96
SCGB2A1O75556 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.95
SCGB2A1O75556 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SCGB2A1O75556 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCGB2A1O75556 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.01■□□□□ 0.95
SCGB2A1O75556 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCGB2A1O75556 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCGB2A1O75556 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCGB2A1O75556 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
SCGB2A1O75556 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.98■□□□□ 0.95
SCGB2A1O75556 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.98■□□□□ 0.95
SCGB2A1O75556 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.98■□□□□ 0.95
SCGB2A1O75556 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.98■□□□□ 0.95
SCGB2A1O75556 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCGB2A1O75556 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCGB2A1O75556 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
SCGB2A1O75556 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.97■□□□□ 0.95
SCGB2A1O75556 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCGB2A1O75556 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCGB2A1O75556 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SCGB2A1O75556 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCGB2A1O75556 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SCGB2A1O75556 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCGB2A1O75556 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCGB2A1O75556 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.93■□□□□ 0.94
SCGB2A1O75556 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCGB2A1O75556 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SCGB2A1O75556 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SCGB2A1O75556 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.93■□□□□ 0.94
SCGB2A1O75556 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCGB2A1O75556 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
SCGB2A1O75556 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.91■□□□□ 0.94
SCGB2A1O75556 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.91■□□□□ 0.94
SCGB2A1O75556 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCGB2A1O75556 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SCGB2A1O75556 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SCGB2A1O75556 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SCGB2A1O75556 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.88■□□□□ 0.93
SCGB2A1O75556 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.88■□□□□ 0.93
SCGB2A1O75556 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms