RNA–Protein interactions for RNA: ENST00000334082.10

HOMER1-202, Transcript of homer scaffold protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOMER1, Length 5,881 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER1-202ENST00000334082 DCAF8L2P0C7V8 631 aa35.97■■■■□ 3.35
HOMER1-202ENST00000334082 PELP1Q8IZL8 1130 aaKnown RBP35.88■■■■□ 3.33
HOMER1-202ENST00000334082 SUPT5HO00267 1087 aaKnown RBP34.76■■■■□ 3.16
HOMER1-202ENST00000334082 ERICH6Q7L0X2 663 aa34.56■■■■□ 3.12
HOMER1-202ENST00000334082 MYT1Q01538 1121 aa34.32■■■■□ 3.09
HOMER1-202ENST00000334082 EHMT2Q96KQ7 1210 aa34.22■■■■□ 3.07
HOMER1-202ENST00000334082 CCER1Q8TC90 406 aaPredicted RBP34.19■■■■□ 3.06
HOMER1-202ENST00000334082 CENPBP07199 599 aaPredicted RBP34.04■■■■□ 3.04
HOMER1-202ENST00000334082 APLP2Q06481 763 aa33.79■■■■□ 3
HOMER1-202ENST00000334082 PCGF6Q9BYE7 350 aa33.58■■■□□ 2.97
HOMER1-202ENST00000334082 NISCHQ9Y2I1 1504 aa33.57■■■□□ 2.96
HOMER1-202ENST00000334082 SHROOM4Q9ULL8 1493 aa33.51■■■□□ 2.95
HOMER1-202ENST00000334082 ZEB1P37275 1124 aaPredicted RBP33.36■■■□□ 2.93
HOMER1-202ENST00000334082 NEFLP07196 543 aa33.29■■■□□ 2.92
HOMER1-202ENST00000334082 TTBK1Q5TCY1 1321 aaPredicted RBP33.28■■■□□ 2.92
HOMER1-202ENST00000334082 YTHDC1Q96MU7 727 aaKnown RBP33.06■■■□□ 2.88
HOMER1-202ENST00000334082 FAM9AQ8IZU1 332 aaPredicted RBP32.99■■■□□ 2.87
HOMER1-202ENST00000334082 DAXXQ9UER7 740 aaPredicted RBP32.64■■■□□ 2.82
HOMER1-202ENST00000334082 RANGAP1P46060 587 aaPredicted RBP32.42■■■□□ 2.78
HOMER1-202ENST00000334082 ATP1B4Q9UN42 357 aaPredicted RBP32.21■■■□□ 2.75
HOMER1-202ENST00000334082 RTL5Q5HYW3 569 aaPredicted RBP32.11■■■□□ 2.73
HOMER1-202ENST00000334082 TRIM41Q8WV44 630 aa32.05■■■□□ 2.72
HOMER1-202ENST00000334082 HRCP23327 699 aa31.93■■■□□ 2.7
HOMER1-202ENST00000334082 UBTFP17480 764 aaKnown RBP31.9■■■□□ 2.7
HOMER1-202ENST00000334082 ZNF316A6NFI3 1004 aaPredicted RBP31.85■■■□□ 2.69
HOMER1-202ENST00000334082 TRIM26Q12899 539 aaPredicted RBP31.77■■■□□ 2.68
HOMER1-202ENST00000334082 PPARGC1BQ86YN6 1023 aaKnown RBP31.71■■■□□ 2.67
HOMER1-202ENST00000334082 POLR3GLQ9BT43 218 aa31.64■■■□□ 2.66
HOMER1-202ENST00000334082 CLSPNQ9HAW4 1339 aa31.5■■■□□ 2.63
HOMER1-202ENST00000334082 CNGB1Q14028 1251 aaPredicted RBP31.37■■■□□ 2.61
HOMER1-202ENST00000334082 ITGAEP38570 1179 aa31.25■■■□□ 2.59
HOMER1-202ENST00000334082 DIEXFQ68CQ4 756 aaKnown RBP31.24■■■□□ 2.59
HOMER1-202ENST00000334082 BCANQ96GW7 911 aa31.12■■■□□ 2.57
HOMER1-202ENST00000334082 GTF3C3Q9Y5Q9 886 aa31.11■■■□□ 2.57
HOMER1-202ENST00000334082 HNRNPUL2Q1KMD3 747 aaKnown RBP31.06■■■□□ 2.56
HOMER1-202ENST00000334082 CDK11AQ9UQ88 783 aaPredicted RBP31.04■■■□□ 2.56
HOMER1-202ENST00000334082 EIF5BO60841 1220 aaKnown RBP30.92■■■□□ 2.54
HOMER1-202ENST00000334082 SLC4A1APQ9BWU0 796 aaKnown RBP30.91■■■□□ 2.54
HOMER1-202ENST00000334082 MYT1LQ9UL68 1186 aa30.91■■■□□ 2.54
HOMER1-202ENST00000334082 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.81■■■□□ 2.52
HOMER1-202ENST00000334082 GLIPR1L2Q4G1C9 344 aa30.73■■■□□ 2.51
HOMER1-202ENST00000334082 LOC105371045A0A1W2PR82 267 aa30.68■■■□□ 2.5
HOMER1-202ENST00000334082 ZBTB47Q9UFB7 747 aaPredicted RBP30.64■■■□□ 2.5
HOMER1-202ENST00000334082 ANP32AP39687 249 aaKnown RBP30.63■■■□□ 2.49
HOMER1-202ENST00000334082 ANP32CO43423 234 aa30.52■■■□□ 2.48
HOMER1-202ENST00000334082 CHIC1Q5VXU3 224 aa30.5■■■□□ 2.47
HOMER1-202ENST00000334082 ACIN1Q9UKV3 1341 aaKnown RBP30.44■■■□□ 2.46
HOMER1-202ENST00000334082 ANP32BQ92688 251 aaKnown RBP30.43■■■□□ 2.46
HOMER1-202ENST00000334082 NPM2Q86SE8 214 aaKnown RBP30.39■■■□□ 2.46
HOMER1-202ENST00000334082 CANXP27824 592 aaKnown RBP30.36■■■□□ 2.45
HOMER1-202ENST00000334082 NEUROD1Q13562 356 aa30.33■■■□□ 2.45
HOMER1-202ENST00000334082 BCL11AQ9H165 835 aa30.31■■■□□ 2.44
HOMER1-202ENST00000334082 FAM50AQ14320 339 aaKnown RBP30.23■■■□□ 2.43
HOMER1-202ENST00000334082 TRIM52Q96A61 297 aa30.22■■■□□ 2.43
HOMER1-202ENST00000334082 ZNF326Q5BKZ1 582 aaKnown RBP30.04■■■□□ 2.4
HOMER1-202ENST00000334082 HSP90AA1P07900 732 aaKnown RBP30.03■■■□□ 2.4
HOMER1-202ENST00000334082 FKBP8Q14318 412 aa29.99■■■□□ 2.39
HOMER1-202ENST00000334082 NBR1Q14596 966 aa29.99■■■□□ 2.39
HOMER1-202ENST00000334082 SLC24A1O60721 1099 aa29.97■■■□□ 2.39
HOMER1-202ENST00000334082 UPF2Q9HAU5 1272 aaKnown RBP29.88■■■□□ 2.37
HOMER1-202ENST00000334082 NEFMP07197 916 aa29.87■■■□□ 2.37
HOMER1-202ENST00000334082 ARXQ96QS3 562 aa29.82■■■□□ 2.36
HOMER1-202ENST00000334082 TNNT2P45379 298 aaPredicted RBP29.57■■■□□ 2.32
HOMER1-202ENST00000334082 HNRNPUQ00839 825 aaKnown RBP eCLIP29.55■■■□□ 2.32
HOMER1-202ENST00000334082 CCDC136Q96JN2 1154 aa29.53■■■□□ 2.32
HOMER1-202ENST00000334082 PABPN1Q86U42 306 aaKnown RBP eCLIP29.45■■■□□ 2.3
HOMER1-202ENST00000334082 TRIM44Q96DX7 344 aaPredicted RBP29.44■■■□□ 2.3
HOMER1-202ENST00000334082 FAM9BQ8IZU0 186 aa29.39■■■□□ 2.3
HOMER1-202ENST00000334082 SCAF1Q9H7N4 1312 aaKnown RBP29.36■■■□□ 2.29
HOMER1-202ENST00000334082 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.36■■■□□ 2.29
HOMER1-202ENST00000334082 ABCC9O60706 1549 aa29.32■■■□□ 2.28
HOMER1-202ENST00000334082 ANP32EQ9BTT0 268 aa29.3■■■□□ 2.28
HOMER1-202ENST00000334082 CDK11BP21127 795 aaKnown RBP29.29■■■□□ 2.28
HOMER1-202ENST00000334082 SALL2Q9Y467 1007 aaPredicted RBP29.26■■■□□ 2.28
HOMER1-202ENST00000334082 DDRGK1Q96HY6 314 aa29.25■■■□□ 2.27
HOMER1-202ENST00000334082 DDX10Q13206 875 aaKnown RBP29.22■■■□□ 2.27
HOMER1-202ENST00000334082 BECN1Q14457 450 aa29.18■■■□□ 2.26
HOMER1-202ENST00000334082 NAP1L5Q96NT1 182 aaPredicted RBP29.17■■■□□ 2.26
HOMER1-202ENST00000334082 ERICH6BQ5W0A0 696 aa29.17■■■□□ 2.26
HOMER1-202ENST00000334082 NCLP19338 710 aaKnown RBP29.15■■■□□ 2.26
HOMER1-202ENST00000334082 IRX6P78412 446 aaPredicted RBP29.15■■■□□ 2.26
HOMER1-202ENST00000334082 TONSLQ96HA7 1378 aa29.11■■■□□ 2.25
HOMER1-202ENST00000334082 RTN4Q9NQC3 1192 aaKnown RBP29.11■■■□□ 2.25
HOMER1-202ENST00000334082 PTMAP06454 111 aaKnown RBP29.1■■■□□ 2.25
HOMER1-202ENST00000334082 GOLGA6L22H0YM25 854 aa29.1■■■□□ 2.25
HOMER1-202ENST00000334082 DNTTIP2Q5QJE6 756 aaKnown RBP29.09■■■□□ 2.25
HOMER1-202ENST00000334082 TMC1Q8TDI8 760 aa29.07■■■□□ 2.24
HOMER1-202ENST00000334082 FBLN2P98095 1184 aa29.06■■■□□ 2.24
HOMER1-202ENST00000334082 WDR43Q15061 677 aaKnown RBP eCLIP28.96■■■□□ 2.23
HOMER1-202ENST00000334082 MYH16Q9H6N6 1097 aa28.96■■■□□ 2.23
HOMER1-202ENST00000334082 PPM1GO15355 546 aaPredicted RBP28.96■■■□□ 2.23
HOMER1-202ENST00000334082 MRS2Q9HD23 443 aa28.96■■■□□ 2.23
HOMER1-202ENST00000334082 MIER1Q8N108 512 aa28.87■■■□□ 2.21
HOMER1-202ENST00000334082 ZNF777Q9ULD5 760 aaPredicted RBP28.85■■■□□ 2.21
HOMER1-202ENST00000334082 ZRSR1Q15695 479 aaKnown RBP28.83■■■□□ 2.21
HOMER1-202ENST00000334082 ARID3CA6NKF2 412 aa28.81■■■□□ 2.2
HOMER1-202ENST00000334082 P3H3Q8IVL6 736 aa28.81■■■□□ 2.2
HOMER1-202ENST00000334082 LAS1LQ9Y4W2 734 aaKnown RBP28.78■■■□□ 2.2
HOMER1-202ENST00000334082 AMER1Q5JTC6 1135 aaPredicted RBP28.78■■■□□ 2.2
HOMER1-202ENST00000334082 NOP58Q9Y2X3 529 aaKnown RBP28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms