Protein–RNA interactions for Protein: O75556

SCGB2A1, Mammaglobin-B, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB2A1O75556 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
SCGB2A1O75556 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SCGB2A1O75556 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
SCGB2A1O75556 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SCGB2A1O75556 AL356512.1-201ENST00000607453 1739 ntBASIC25.63■■□□□ 1.69
SCGB2A1O75556 HES6-203ENST00000409160 1600 ntTSL 2 BASIC25.63■■□□□ 1.69
SCGB2A1O75556 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
SCGB2A1O75556 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC25.51■■□□□ 1.67
SCGB2A1O75556 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SCGB2A1O75556 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC25.23■■□□□ 1.63
SCGB2A1O75556 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC25.09■■□□□ 1.61
SCGB2A1O75556 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCGB2A1O75556 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC24.94■■□□□ 1.58
SCGB2A1O75556 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SCGB2A1O75556 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
SCGB2A1O75556 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
SCGB2A1O75556 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC24.63■■□□□ 1.53
SCGB2A1O75556 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SCGB2A1O75556 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
SCGB2A1O75556 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC24.4■■□□□ 1.5
SCGB2A1O75556 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC24.38■■□□□ 1.49
SCGB2A1O75556 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SCGB2A1O75556 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SCGB2A1O75556 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
SCGB2A1O75556 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SCGB2A1O75556 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
SCGB2A1O75556 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SCGB2A1O75556 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
SCGB2A1O75556 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SCGB2A1O75556 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC24.01■■□□□ 1.43
SCGB2A1O75556 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SCGB2A1O75556 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCGB2A1O75556 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
SCGB2A1O75556 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC23.91■■□□□ 1.42
SCGB2A1O75556 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
SCGB2A1O75556 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SCGB2A1O75556 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCGB2A1O75556 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
SCGB2A1O75556 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCGB2A1O75556 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SCGB2A1O75556 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
SCGB2A1O75556 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC23.73■■□□□ 1.39
SCGB2A1O75556 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SCGB2A1O75556 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC23.67■■□□□ 1.38
SCGB2A1O75556 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
SCGB2A1O75556 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SCGB2A1O75556 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SCGB2A1O75556 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
SCGB2A1O75556 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.59■■□□□ 1.37
SCGB2A1O75556 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC23.59■■□□□ 1.37
SCGB2A1O75556 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SCGB2A1O75556 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.55■■□□□ 1.36
SCGB2A1O75556 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.54■■□□□ 1.36
SCGB2A1O75556 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC23.44■■□□□ 1.34
SCGB2A1O75556 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SCGB2A1O75556 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SCGB2A1O75556 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
SCGB2A1O75556 ILK-212ENST00000532063 1617 ntTSL 2 BASIC23.37■■□□□ 1.33
SCGB2A1O75556 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
SCGB2A1O75556 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SCGB2A1O75556 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
SCGB2A1O75556 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SCGB2A1O75556 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC23.26■■□□□ 1.31
SCGB2A1O75556 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC23.26■■□□□ 1.31
SCGB2A1O75556 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
SCGB2A1O75556 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
SCGB2A1O75556 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SCGB2A1O75556 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SCGB2A1O75556 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC23.11■■□□□ 1.29
SCGB2A1O75556 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.09■■□□□ 1.29
SCGB2A1O75556 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC23.07■■□□□ 1.28
SCGB2A1O75556 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SCGB2A1O75556 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SCGB2A1O75556 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
SCGB2A1O75556 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SCGB2A1O75556 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SCGB2A1O75556 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SCGB2A1O75556 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SCGB2A1O75556 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SCGB2A1O75556 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
SCGB2A1O75556 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SCGB2A1O75556 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC22.85■■□□□ 1.25
SCGB2A1O75556 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
SCGB2A1O75556 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SCGB2A1O75556 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
SCGB2A1O75556 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.77■■□□□ 1.24
SCGB2A1O75556 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SCGB2A1O75556 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
SCGB2A1O75556 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SCGB2A1O75556 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SCGB2A1O75556 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SCGB2A1O75556 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
SCGB2A1O75556 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SCGB2A1O75556 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SCGB2A1O75556 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SCGB2A1O75556 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SCGB2A1O75556 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
SCGB2A1O75556 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SCGB2A1O75556 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SCGB2A1O75556 AC145285.7-201ENST00000614819 1539 ntBASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms