Protein–RNA interactions for Protein: A0A0B4J1V1

IGHV3-21, Immunoglobulin heavy variable 3-21, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-21A0A0B4J1V1 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
IGHV3-21A0A0B4J1V1 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
IGHV3-21A0A0B4J1V1 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.43■■□□□ 1.02
IGHV3-21A0A0B4J1V1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
IGHV3-21A0A0B4J1V1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
IGHV3-21A0A0B4J1V1 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
IGHV3-21A0A0B4J1V1 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
IGHV3-21A0A0B4J1V1 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
IGHV3-21A0A0B4J1V1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.4■■□□□ 1.02
IGHV3-21A0A0B4J1V1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.4■■□□□ 1.02
IGHV3-21A0A0B4J1V1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.37■■□□□ 1.01
IGHV3-21A0A0B4J1V1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
IGHV3-21A0A0B4J1V1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
IGHV3-21A0A0B4J1V1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.35■■□□□ 1.01
IGHV3-21A0A0B4J1V1 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.35■■□□□ 1.01
IGHV3-21A0A0B4J1V1 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.35■■□□□ 1.01
IGHV3-21A0A0B4J1V1 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
IGHV3-21A0A0B4J1V1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
IGHV3-21A0A0B4J1V1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.34■■□□□ 1.01
IGHV3-21A0A0B4J1V1 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
IGHV3-21A0A0B4J1V1 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
IGHV3-21A0A0B4J1V1 ABCB10P1-201ENST00000614297 2181 ntBASIC21.31■■□□□ 1
IGHV3-21A0A0B4J1V1 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
IGHV3-21A0A0B4J1V1 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.3■■□□□ 1
IGHV3-21A0A0B4J1V1 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.29■■□□□ 1
IGHV3-21A0A0B4J1V1 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.27■■□□□ 1
IGHV3-21A0A0B4J1V1 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
IGHV3-21A0A0B4J1V1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
IGHV3-21A0A0B4J1V1 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
IGHV3-21A0A0B4J1V1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
IGHV3-21A0A0B4J1V1 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
IGHV3-21A0A0B4J1V1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
IGHV3-21A0A0B4J1V1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
IGHV3-21A0A0B4J1V1 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
IGHV3-21A0A0B4J1V1 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.24■□□□□ 0.99
IGHV3-21A0A0B4J1V1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
IGHV3-21A0A0B4J1V1 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
IGHV3-21A0A0B4J1V1 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
IGHV3-21A0A0B4J1V1 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.22■□□□□ 0.99
IGHV3-21A0A0B4J1V1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
IGHV3-21A0A0B4J1V1 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
IGHV3-21A0A0B4J1V1 AL161658.1-201ENST00000623641 1967 ntBASIC21.2■□□□□ 0.98
IGHV3-21A0A0B4J1V1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
IGHV3-21A0A0B4J1V1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
IGHV3-21A0A0B4J1V1 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
IGHV3-21A0A0B4J1V1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
IGHV3-21A0A0B4J1V1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
IGHV3-21A0A0B4J1V1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
IGHV3-21A0A0B4J1V1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
IGHV3-21A0A0B4J1V1 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
IGHV3-21A0A0B4J1V1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
IGHV3-21A0A0B4J1V1 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.16■□□□□ 0.98
IGHV3-21A0A0B4J1V1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
IGHV3-21A0A0B4J1V1 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
IGHV3-21A0A0B4J1V1 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
IGHV3-21A0A0B4J1V1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21.15■□□□□ 0.98
IGHV3-21A0A0B4J1V1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
IGHV3-21A0A0B4J1V1 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.14■□□□□ 0.97
IGHV3-21A0A0B4J1V1 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.14■□□□□ 0.97
IGHV3-21A0A0B4J1V1 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
IGHV3-21A0A0B4J1V1 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
IGHV3-21A0A0B4J1V1 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
IGHV3-21A0A0B4J1V1 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IGHV3-21A0A0B4J1V1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.11■□□□□ 0.97
IGHV3-21A0A0B4J1V1 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.11■□□□□ 0.97
IGHV3-21A0A0B4J1V1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
IGHV3-21A0A0B4J1V1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
IGHV3-21A0A0B4J1V1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
IGHV3-21A0A0B4J1V1 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
IGHV3-21A0A0B4J1V1 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IGHV3-21A0A0B4J1V1 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
IGHV3-21A0A0B4J1V1 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.09■□□□□ 0.97
IGHV3-21A0A0B4J1V1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
IGHV3-21A0A0B4J1V1 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
IGHV3-21A0A0B4J1V1 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
IGHV3-21A0A0B4J1V1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
IGHV3-21A0A0B4J1V1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
IGHV3-21A0A0B4J1V1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IGHV3-21A0A0B4J1V1 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IGHV3-21A0A0B4J1V1 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
IGHV3-21A0A0B4J1V1 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.06■□□□□ 0.96
IGHV3-21A0A0B4J1V1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
IGHV3-21A0A0B4J1V1 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IGHV3-21A0A0B4J1V1 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.06■□□□□ 0.96
IGHV3-21A0A0B4J1V1 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
IGHV3-21A0A0B4J1V1 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IGHV3-21A0A0B4J1V1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IGHV3-21A0A0B4J1V1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IGHV3-21A0A0B4J1V1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
IGHV3-21A0A0B4J1V1 AC139426.1-201ENST00000568218 2529 ntBASIC21.04■□□□□ 0.96
IGHV3-21A0A0B4J1V1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
IGHV3-21A0A0B4J1V1 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.03■□□□□ 0.96
IGHV3-21A0A0B4J1V1 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
IGHV3-21A0A0B4J1V1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.03■□□□□ 0.96
IGHV3-21A0A0B4J1V1 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
IGHV3-21A0A0B4J1V1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
IGHV3-21A0A0B4J1V1 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
IGHV3-21A0A0B4J1V1 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
IGHV3-21A0A0B4J1V1 ABCB10P3-201ENST00000561950 2166 ntBASIC21■□□□□ 0.95
IGHV3-21A0A0B4J1V1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms