Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC38.19■■■■□ 3.75e-8■■■□□ 16.1
PABPN1Q86U42 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC34.83■■■■□ 3.175e-8■■■□□ 16.1
PABPN1Q86U42 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 35e-8■■■□□ 16.1
PABPN1Q86U42 SMARCD2-204ENST00000450364 993 ntTSL 528.13■■■□□ 2.095e-8■■■□□ 16.1
PABPN1Q86U42 SNF8-212ENST00000514089 571 ntTSL 528.06■■■□□ 2.085e-8■■■□□ 16.1
PABPN1Q86U42 SLC25A10-206ENST00000573246 898 ntTSL 327.79■■■□□ 2.045e-8■■■□□ 16.1
PABPN1Q86U42 SNF8-206ENST00000509989 677 ntTSL 327.22■■□□□ 1.955e-8■■■□□ 16.1
PABPN1Q86U42 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.775e-8■■■□□ 16.1
PABPN1Q86U42 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC25.49■■□□□ 1.675e-8■■■□□ 16.1
PABPN1Q86U42 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC25.08■■□□□ 1.615e-8■■■□□ 16.1
PABPN1Q86U42 SNF8-207ENST00000509995 560 ntTSL 324.78■■□□□ 1.565e-8■■■□□ 16.1
PABPN1Q86U42 SNF8-215ENST00000515572 687 ntTSL 222.91■■□□□ 1.265e-8■■■□□ 16.1
PABPN1Q86U42 SNF8-203ENST00000504000 1899 ntTSL 222.6■■□□□ 1.215e-8■■■□□ 16.1
PABPN1Q86U42 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC21.93■■□□□ 1.15e-8■■■□□ 16.1
PABPN1Q86U42 SNF8-201ENST00000290330 951 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.025e-8■■■□□ 16.1
PABPN1Q86U42 PILRB-211ENST00000493091 4345 ntTSL 220.23■□□□□ 0.831e-6■■■□□ 16.1
PABPN1Q86U42 SLC25A25-AS1-201ENST00000418747 6391 ntTSL 1 (best) BASIC14.6□□□□□ -0.075e-8■■■□□ 16.1
PABPN1Q86U42 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC8.25□□□□□ -1.095e-8■■■□□ 16.1
PABPN1Q86U42 ILF3-205ENST00000586544 3859 ntTSL 1 (best)15.32■□□□□ 0.047e-7■■■□□ 16.1
PABPN1Q86U42 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.632e-9■■■□□ 16.1
PABPN1Q86U42 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC58.88■■■■■ 7.023e-7■■■□□ 16.1
PABPN1Q86U42 SLC25A28-202ENST00000434701 1005 ntTSL 523.92■■□□□ 1.423e-7■■■□□ 16.1
PABPN1Q86U42 GGA1-219ENST00000481613 647 ntTSL 222.29■■□□□ 1.166e-10■■■□□ 16.1
PABPN1Q86U42 ISYNA1-204ENST00000577916 2148 ntTSL 539.52■■■■□ 3.926e-7■■■□□ 16.1
PABPN1Q86U42 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.296e-7■■■□□ 16.1
PABPN1Q86U42 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC35.24■■■■□ 3.236e-7■■■□□ 16.1
PABPN1Q86U42 ISYNA1-211ENST00000582811 2039 ntTSL 234.48■■■■□ 3.116e-7■■■□□ 16.1
PABPN1Q86U42 ISYNA1-210ENST00000582770 1654 ntTSL 232.37■■■□□ 2.776e-7■■■□□ 16.1
PABPN1Q86U42 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC31.59■■■□□ 2.656e-7■■■□□ 16.1
PABPN1Q86U42 ISYNA1-203ENST00000577820 1466 ntTSL 527.55■■■□□ 26e-7■■■□□ 16.1
PABPN1Q86U42 PAH-211ENST00000551114 1109 ntTSL 29.19□□□□□ -0.949e-7■■■□□ 16.1
PABPN1Q86U42 PAH-216ENST00000635477 429 ntTSL 57.09□□□□□ -1.279e-7■■■□□ 16.1
PABPN1Q86U42 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.072e-6■■■□□ 16.1
PABPN1Q86U42 NSMF-207ENST00000371482 2888 ntTSL 1 (best)25.42■■□□□ 1.662e-9■■■□□ 16.1
PABPN1Q86U42 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC42.26■■■■■ 4.369e-7■■■□□ 16.1
PABPN1Q86U42 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC39.64■■■■□ 3.949e-7■■■□□ 16.1
PABPN1Q86U42 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC37.33■■■■□ 3.579e-7■■■□□ 16.1
PABPN1Q86U42 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC32.65■■■□□ 2.829e-7■■■□□ 16.1
PABPN1Q86U42 HDAC6-220ENST00000477528 4832 ntTSL 1 (best)22.13■■□□□ 1.137e-7■■■□□ 16.1
PABPN1Q86U42 HDAC6-201ENST00000334136 4190 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.87e-7■■■□□ 16.1
PABPN1Q86U42 HDAC6-203ENST00000376619 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.57e-7■■■□□ 16.1
PABPN1Q86U42 HDAC6-228ENST00000486227 4718 ntTSL 216.86■□□□□ 0.297e-7■■■□□ 16.1
PABPN1Q86U42 PRPF6-201ENST00000266079 3044 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.21e-6■■■□□ 16.1
PABPN1Q86U42 JAK3-207ENST00000534444 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.682e-6■■■□□ 16.1
PABPN1Q86U42 JAK3-204ENST00000527670 3996 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.522e-6■■■□□ 16.1
PABPN1Q86U42 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC22.63■■□□□ 1.218e-9■■■□□ 16.1
PABPN1Q86U42 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC21.58■■□□□ 1.058e-9■■■□□ 16.1
PABPN1Q86U42 SLC26A6-220ENST00000489483 5682 ntTSL 221.11■□□□□ 0.978e-9■■■□□ 16.1
PABPN1Q86U42 SLC26A6-201ENST00000307364 2586 ntTSL 1 (best)20.61■□□□□ 0.898e-9■■■□□ 16.1
PABPN1Q86U42 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.858e-9■■■□□ 16.1
PABPN1Q86U42 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC19.94■□□□□ 0.788e-9■■■□□ 16.1
PABPN1Q86U42 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.688e-9■■■□□ 16.1
PABPN1Q86U42 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC19.09■□□□□ 0.658e-9■■■□□ 16.1
PABPN1Q86U42 SLC26A6-217ENST00000480524 2727 ntTSL 1 (best)18.57■□□□□ 0.568e-9■■■□□ 16.1
PABPN1Q86U42 MED24-207ENST00000470126 655 ntTSL 534.08■■■■□ 3.056e-7■■■□□ 16
PABPN1Q86U42 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC30.22■■■□□ 2.433e-6■■■□□ 16
PABPN1Q86U42 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC25.61■■□□□ 1.693e-6■■■□□ 16
PABPN1Q86U42 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC25.32■■□□□ 1.643e-6■■■□□ 16
PABPN1Q86U42 TMUB2-207ENST00000587630 1191 ntTSL 325.2■■□□□ 1.623e-6■■■□□ 16
PABPN1Q86U42 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.613e-6■■■□□ 16
PABPN1Q86U42 TMUB2-206ENST00000587326 1839 ntTSL 1 (best)24.31■■□□□ 1.483e-6■■■□□ 16
PABPN1Q86U42 TMUB2-214ENST00000590235 1569 ntTSL 1 (best) BASIC24■■□□□ 1.433e-6■■■□□ 16
PABPN1Q86U42 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC23.45■■□□□ 1.343e-6■■■□□ 16
PABPN1Q86U42 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC23.37■■□□□ 1.333e-6■■■□□ 16
PABPN1Q86U42 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.923e-6■■■□□ 16
PABPN1Q86U42 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC20.56■□□□□ 0.883e-6■■■□□ 16
PABPN1Q86U42 TRMT1-207ENST00000586830 354 ntTSL 326.36■■□□□ 1.813e-7■■■□□ 16
PABPN1Q86U42 COL9A3-214ENST00000490398 496 ntTSL 436.57■■■■□ 3.446e-12■■■□□ 16
PABPN1Q86U42 ACTN4-211ENST00000589528 441 ntTSL 232.49■■■□□ 2.797e-9■■■□□ 16
PABPN1Q86U42 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.827e-9■■■□□ 16
PABPN1Q86U42 ACTN4-204ENST00000440400 3180 ntTSL 522.46■■□□□ 1.197e-9■■■□□ 16
PABPN1Q86U42 CPT1B-213ENST00000497224 806 ntTSL 332.86■■■□□ 2.852e-6■■■□□ 16
PABPN1Q86U42 TUBGCP6-202ENST00000425018 1509 ntTSL 1 (best)36.59■■■■□ 3.451e-6■■■□□ 16
PABPN1Q86U42 TUBGCP6-208ENST00000498611 5274 ntTSL 1 (best)25.54■■□□□ 1.681e-6■■■□□ 16
PABPN1Q86U42 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC24.43■■□□□ 1.51e-6■■■□□ 16
PABPN1Q86U42 TUBGCP6-207ENST00000491449 4044 ntTSL 518.66■□□□□ 0.581e-6■■■□□ 16
PABPN1Q86U42 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.571e-6■■■□□ 16
PABPN1Q86U42 HGS-204ENST00000571237 878 ntTSL 332.81■■■□□ 2.847e-7■■■□□ 16
PABPN1Q86U42 TKFC-210ENST00000529479 1781 ntTSL 1 (best)33.3■■■□□ 2.922e-7■■■□□ 16
PABPN1Q86U42 ARHGAP45-205ENST00000586378 940 ntTSL 246.31■■■■■ 53e-7■■■□□ 16
PABPN1Q86U42 D2HGDH-214ENST00000473126 1612 ntTSL 1 (best)45.6■■■■■ 4.899e-7■■■□□ 16
PABPN1Q86U42 ARHGAP45-215ENST00000592297 1563 ntTSL 243.09■■■■■ 4.493e-7■■■□□ 16
PABPN1Q86U42 ARHGAP45-213ENST00000591169 1284 ntTSL 241.22■■■■■ 4.193e-7■■■□□ 16
PABPN1Q86U42 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC39.65■■■■□ 3.949e-7■■■□□ 16
PABPN1Q86U42 D2HGDH-212ENST00000468064 2298 ntTSL 1 (best)38.08■■■■□ 3.699e-7■■■□□ 16
PABPN1Q86U42 D2HGDH-202ENST00000400769 2277 ntTSL 238.08■■■■□ 3.699e-7■■■□□ 16
PABPN1Q86U42 D2HGDH-215ENST00000486953 2232 ntTSL 1 (best)37.33■■■■□ 3.579e-7■■■□□ 16
PABPN1Q86U42 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.539e-7■■■□□ 16
PABPN1Q86U42 D2HGDH-206ENST00000436747 4549 ntTSL 1 (best)26.91■■□□□ 1.99e-7■■■□□ 16
PABPN1Q86U42 COL9A2-203ENST00000417105 677 ntTSL 545.26■■■■■ 4.845e-7■■■□□ 16
PABPN1Q86U42 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.519e-7■■■□□ 16
PABPN1Q86U42 TPM2-207ENST00000604975 573 ntTSL 528.45■■■□□ 2.141e-8■■■□□ 16
PABPN1Q86U42 SF3B2-210ENST00000530981 1080 ntTSL 518.21■□□□□ 0.516e-10■■■□□ 15.9
PABPN1Q86U42 SF3B2-201ENST00000322535 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.296e-10■■■□□ 15.9
PABPN1Q86U42 SF3B2-206ENST00000528302 3254 ntTSL 5 BASIC15.28■□□□□ 0.046e-10■■■□□ 15.9
PABPN1Q86U42 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC26.94■■□□□ 1.93e-8■■■□□ 15.9
PABPN1Q86U42 TBCD-207ENST00000571796 1940 ntTSL 1 (best)31.16■■■□□ 2.582e-6■■■□□ 15.9
PABPN1Q86U42 TBCD-215ENST00000574818 771 ntTSL 322.5■■□□□ 1.192e-6■■■□□ 15.9
PABPN1Q86U42 COL9A3-212ENST00000481800 548 ntTSL 435.7■■■■□ 3.311e-11■■■□□ 15.9
PABPN1Q86U42 COL9A3-209ENST00000469852 901 ntTSL 328.33■■■□□ 2.131e-11■■■□□ 15.9
Retrieved 100 of 8,254 protein–RNA pairs in 255.2 ms