RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 NISCHQ9Y2I1 1504 aa19.36■□□□□ 0.69
SF3B2-206ENST00000528302 SHROOM4Q9ULL8 1493 aa17.3■□□□□ 0.36
SF3B2-206ENST00000528302 SUPT5HO00267 1087 aaKnown RBP17.13■□□□□ 0.33
SF3B2-206ENST00000528302 DCAF8L2P0C7V8 631 aa16.96■□□□□ 0.31
SF3B2-206ENST00000528302 PCGF6Q9BYE7 350 aa16.53■□□□□ 0.24
SF3B2-206ENST00000528302 PPARGC1BQ86YN6 1023 aaKnown RBP16.44■□□□□ 0.22
SF3B2-206ENST00000528302 CHIC1Q5VXU3 224 aa16.39■□□□□ 0.21
SF3B2-206ENST00000528302 HRCP23327 699 aa16.37■□□□□ 0.21
SF3B2-206ENST00000528302 MYO15BQ96JP2 1530 aa16.36■□□□□ 0.21
SF3B2-206ENST00000528302 ZCCHC6Q5VYS8 1495 aaKnown RBP16.29■□□□□ 0.2
SF3B2-206ENST00000528302 LOC105371045A0A1W2PR82 267 aa16.27■□□□□ 0.2
SF3B2-206ENST00000528302 SLC24A1O60721 1099 aa16.27■□□□□ 0.2
SF3B2-206ENST00000528302 CCDC180Q9P1Z9 1646 aa16.22■□□□□ 0.19
SF3B2-206ENST00000528302 EHMT2Q96KQ7 1210 aa16.16■□□□□ 0.18
SF3B2-206ENST00000528302 FAM9AQ8IZU1 332 aaPredicted RBP15.97■□□□□ 0.15
SF3B2-206ENST00000528302 ABCC9O60706 1549 aa15.77■□□□□ 0.12
SF3B2-206ENST00000528302 TRIM26Q12899 539 aaPredicted RBP15.77■□□□□ 0.11
SF3B2-206ENST00000528302 SCRIBQ14160 1630 aa15.71■□□□□ 0.1
SF3B2-206ENST00000528302 TRIM41Q8WV44 630 aa15.67■□□□□ 0.1
SF3B2-206ENST00000528302 TTBK1Q5TCY1 1321 aaPredicted RBP15.65■□□□□ 0.1
SF3B2-206ENST00000528302 DCAF1Q9Y4B6 1507 aa15.62■□□□□ 0.09
SF3B2-206ENST00000528302 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.45■□□□□ 0.06
SF3B2-206ENST00000528302 SCAF1Q9H7N4 1312 aaKnown RBP15.45■□□□□ 0.06
SF3B2-206ENST00000528302 RSF1Q96T23 1441 aaPredicted RBP15.41■□□□□ 0.06
SF3B2-206ENST00000528302 ZEB1P37275 1124 aaPredicted RBP15.38■□□□□ 0.05
SF3B2-206ENST00000528302 CECR2Q9BXF3 1484 aa15.37■□□□□ 0.05
SF3B2-206ENST00000528302 CCER1Q8TC90 406 aaPredicted RBP15.35■□□□□ 0.05
SF3B2-206ENST00000528302 RB1CC1Q8TDY2 1594 aa15.3■□□□□ 0.04
SF3B2-206ENST00000528302 PABPN1Q86U42 306 aaKnown RBP eCLIP15.28■□□□□ 0.046e-10■■■□□ 15.9
SF3B2-206ENST00000528302 MROH2BQ7Z745 1585 aa15.2■□□□□ 0.02
SF3B2-206ENST00000528302 NEUROD1Q13562 356 aa15.19■□□□□ 0.02
SF3B2-206ENST00000528302 YTHDC1Q96MU7 727 aaKnown RBP15.16■□□□□ 0.02
SF3B2-206ENST00000528302 WIZO95785 1651 aa15.14■□□□□ 0.01
SF3B2-206ENST00000528302 NACADO15069 1562 aa15.13■□□□□ 0.01
SF3B2-206ENST00000528302 GTF3C3Q9Y5Q9 886 aa15.11■□□□□ 0.01
SF3B2-206ENST00000528302 DIEXFQ68CQ4 756 aaKnown RBP15.11■□□□□ 0.01
SF3B2-206ENST00000528302 RANGAP1P46060 587 aaPredicted RBP15.09■□□□□ 0.01
SF3B2-206ENST00000528302 ACIN1Q9UKV3 1341 aaKnown RBP15.08■□□□□ 0
SF3B2-206ENST00000528302 PELP1Q8IZL8 1130 aaKnown RBP15.07■□□□□ 0
SF3B2-206ENST00000528302 MYT1Q01538 1121 aa15.06■□□□□ 0
SF3B2-206ENST00000528302 UBTFP17480 764 aaKnown RBP15.02■□□□□ -0
SF3B2-206ENST00000528302 HNRNPUL2Q1KMD3 747 aaKnown RBP14.98□□□□□ -0.01
SF3B2-206ENST00000528302 DAXXQ9UER7 740 aaPredicted RBP14.96□□□□□ -0.01
SF3B2-206ENST00000528302 CENPBP07199 599 aaPredicted RBP14.95□□□□□ -0.02
SF3B2-206ENST00000528302 ABCC8Q09428 1581 aa14.9□□□□□ -0.02
SF3B2-206ENST00000528302 PRKCSHP14314 528 aaPredicted RBP14.85□□□□□ -0.03
SF3B2-206ENST00000528302 BAZ1AQ9NRL2 1556 aaPredicted RBP14.84□□□□□ -0.03
SF3B2-206ENST00000528302 UNC13AQ9UPW8 1703 aa14.82□□□□□ -0.04
SF3B2-206ENST00000528302 CCDC88BA6NC98 1476 aa14.81□□□□□ -0.04
SF3B2-206ENST00000528302 SOGA1O94964 1423 aa14.8□□□□□ -0.04
SF3B2-206ENST00000528302 MIER1Q8N108 512 aa14.79□□□□□ -0.04
SF3B2-206ENST00000528302 ZNF316A6NFI3 1004 aaPredicted RBP14.79□□□□□ -0.04
SF3B2-206ENST00000528302 CEP162Q5TB80 1403 aa14.77□□□□□ -0.05
SF3B2-206ENST00000528302 SMARCA4P51532 1647 aa14.76□□□□□ -0.05
SF3B2-206ENST00000528302 CSRNP3Q8WYN3 585 aa14.74□□□□□ -0.05
SF3B2-206ENST00000528302 RUSC2Q8N2Y8 1516 aa14.74□□□□□ -0.05
SF3B2-206ENST00000528302 APLP2Q06481 763 aa14.69□□□□□ -0.06
SF3B2-206ENST00000528302 TOP2AP11388 1531 aaKnown RBP14.68□□□□□ -0.06
SF3B2-206ENST00000528302 SMARCA2P51531 1590 aa14.67□□□□□ -0.06
SF3B2-206ENST00000528302 BICRAQ9NZM4 1560 aa14.63□□□□□ -0.07
SF3B2-206ENST00000528302 ITGAEP38570 1179 aa14.61□□□□□ -0.07
SF3B2-206ENST00000528302 ERICH6Q7L0X2 663 aa14.57□□□□□ -0.08
SF3B2-206ENST00000528302 EIF4G1Q04637 1599 aaKnown RBP14.57□□□□□ -0.08
SF3B2-206ENST00000528302 TNIKQ9UKE5 1360 aa14.56□□□□□ -0.08
SF3B2-206ENST00000528302 WRNQ14191 1432 aaPredicted RBP eCLIP14.52□□□□□ -0.09
SF3B2-206ENST00000528302 PLPPR3Q6T4P5 718 aa14.51□□□□□ -0.09
SF3B2-206ENST00000528302 BAZ1BQ9UIG0 1483 aaKnown RBP14.5□□□□□ -0.09
SF3B2-206ENST00000528302 ATAD2BQ9ULI0 1458 aa14.47□□□□□ -0.09
SF3B2-206ENST00000528302 BCANQ96GW7 911 aa14.46□□□□□ -0.09
SF3B2-206ENST00000528302 CLIP1P30622 1438 aa14.45□□□□□ -0.1
SF3B2-206ENST00000528302 GOLGA3Q08378 1498 aa14.44□□□□□ -0.1
SF3B2-206ENST00000528302 SYNJ1O43426 1573 aa14.42□□□□□ -0.1
SF3B2-206ENST00000528302 NCBP3Q53F19 620 aaKnown RBP14.4□□□□□ -0.1
SF3B2-206ENST00000528302 KCNH8Q96L42 1107 aa14.4□□□□□ -0.1
SF3B2-206ENST00000528302 RTN4Q9NQC3 1192 aaKnown RBP14.39□□□□□ -0.11
SF3B2-206ENST00000528302 KANK4Q5T7N3 995 aaPredicted RBP14.38□□□□□ -0.11
SF3B2-206ENST00000528302 HIRIP3Q9BW71 556 aaPredicted RBP14.35□□□□□ -0.11
SF3B2-206ENST00000528302 ATP1B4Q9UN42 357 aaPredicted RBP14.35□□□□□ -0.11
SF3B2-206ENST00000528302 RAPGEF2Q9Y4G8 1499 aa14.34□□□□□ -0.11
SF3B2-206ENST00000528302 SUPT16HQ9Y5B9 1047 aaKnown RBP14.33□□□□□ -0.11
SF3B2-206ENST00000528302 EEA1Q15075 1411 aa14.3□□□□□ -0.12
SF3B2-206ENST00000528302 CEP164Q9UPV0 1460 aa14.29□□□□□ -0.12
SF3B2-206ENST00000528302 VPS8Q8N3P4 1428 aa14.28□□□□□ -0.12
SF3B2-206ENST00000528302 DDX10Q13206 875 aaKnown RBP14.24□□□□□ -0.13
SF3B2-206ENST00000528302 P3H3Q8IVL6 736 aa14.24□□□□□ -0.13
SF3B2-206ENST00000528302 DHX57Q6P158 1386 aaKnown RBP14.23□□□□□ -0.13
SF3B2-206ENST00000528302 PEG3Q9GZU2 1588 aa14.23□□□□□ -0.13
SF3B2-206ENST00000528302 FAM50AQ14320 339 aaKnown RBP14.21□□□□□ -0.14
SF3B2-206ENST00000528302 SIN3AQ96ST3 1273 aa14.21□□□□□ -0.14
SF3B2-206ENST00000528302 TRIM52Q96A61 297 aa14.19□□□□□ -0.14
SF3B2-206ENST00000528302 FKBP8Q14318 412 aa14.19□□□□□ -0.14
SF3B2-206ENST00000528302 TSHZ2Q9NRE2 1034 aa14.18□□□□□ -0.14
SF3B2-206ENST00000528302 KIF21BO75037 1637 aa14.16□□□□□ -0.14
SF3B2-206ENST00000528302 CUX1P39880 1505 aa14.11□□□□□ -0.15
SF3B2-206ENST00000528302 DNAJC5BQ9UF47 199 aa14.1□□□□□ -0.15
SF3B2-206ENST00000528302 TOP2BQ02880 1626 aa14.09□□□□□ -0.15
SF3B2-206ENST00000528302 NCAPD3P42695 1498 aa14.08□□□□□ -0.16
SF3B2-206ENST00000528302 IRX6P78412 446 aaPredicted RBP14.07□□□□□ -0.16
SF3B2-206ENST00000528302 ARAP1Q96P48 1450 aa14.06□□□□□ -0.16
SF3B2-206ENST00000528302 CUX2O14529 1486 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms