RNA–Protein interactions for RNA: ENST00000232375.7

PFKFB4-201, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFKFB4, Length 3,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB4-201ENST00000232375 NISCHQ9Y2I1 1504 aa31.27■■■□□ 2.6
PFKFB4-201ENST00000232375 SHROOM4Q9ULL8 1493 aa27.13■■□□□ 1.93
PFKFB4-201ENST00000232375 DCAF8L2P0C7V8 631 aa26.91■■□□□ 1.9
PFKFB4-201ENST00000232375 SUPT5HO00267 1087 aaKnown RBP26.48■■□□□ 1.83
PFKFB4-201ENST00000232375 CCDC180Q9P1Z9 1646 aa26.37■■□□□ 1.81
PFKFB4-201ENST00000232375 ZCCHC6Q5VYS8 1495 aaKnown RBP26.31■■□□□ 1.8
PFKFB4-201ENST00000232375 ABCC9O60706 1549 aa25.43■■□□□ 1.66
PFKFB4-201ENST00000232375 DCAF1Q9Y4B6 1507 aa25.34■■□□□ 1.65
PFKFB4-201ENST00000232375 CHIC1Q5VXU3 224 aa25.28■■□□□ 1.64
PFKFB4-201ENST00000232375 SCRIBQ14160 1630 aa25.18■■□□□ 1.62
PFKFB4-201ENST00000232375 MYO15BQ96JP2 1530 aa25.01■■□□□ 1.59
PFKFB4-201ENST00000232375 LOC105371045A0A1W2PR82 267 aa24.79■■□□□ 1.56
PFKFB4-201ENST00000232375 RSF1Q96T23 1441 aaPredicted RBP24.77■■□□□ 1.56
PFKFB4-201ENST00000232375 CECR2Q9BXF3 1484 aa24.66■■□□□ 1.54
PFKFB4-201ENST00000232375 EHMT2Q96KQ7 1210 aa24.65■■□□□ 1.54
PFKFB4-201ENST00000232375 NACADO15069 1562 aa24.64■■□□□ 1.54
PFKFB4-201ENST00000232375 FAM9AQ8IZU1 332 aaPredicted RBP24.6■■□□□ 1.53
PFKFB4-201ENST00000232375 TRIM41Q8WV44 630 aa24.51■■□□□ 1.51
PFKFB4-201ENST00000232375 PABPN1Q86U42 306 aaKnown RBP eCLIP24.49■■□□□ 1.519e-7■■■□□ 16
PFKFB4-201ENST00000232375 MROH2BQ7Z745 1585 aa24.43■■□□□ 1.5
PFKFB4-201ENST00000232375 RB1CC1Q8TDY2 1594 aa24.43■■□□□ 1.5
PFKFB4-201ENST00000232375 PCGF6Q9BYE7 350 aa24.43■■□□□ 1.5
PFKFB4-201ENST00000232375 WIZO95785 1651 aa24.24■■□□□ 1.47
PFKFB4-201ENST00000232375 BAZ1AQ9NRL2 1556 aaPredicted RBP23.99■■□□□ 1.43
PFKFB4-201ENST00000232375 PPARGC1BQ86YN6 1023 aaKnown RBP23.92■■□□□ 1.42
PFKFB4-201ENST00000232375 HRCP23327 699 aa23.9■■□□□ 1.42
PFKFB4-201ENST00000232375 UNC13AQ9UPW8 1703 aa23.89■■□□□ 1.41
PFKFB4-201ENST00000232375 SMARCA4P51532 1647 aa23.82■■□□□ 1.4
PFKFB4-201ENST00000232375 CCDC88BA6NC98 1476 aa23.8■■□□□ 1.4
PFKFB4-201ENST00000232375 BICRAQ9NZM4 1560 aa23.75■■□□□ 1.39
PFKFB4-201ENST00000232375 TRIM26Q12899 539 aaPredicted RBP23.74■■□□□ 1.39
PFKFB4-201ENST00000232375 ABCC8Q09428 1581 aa23.74■■□□□ 1.39
PFKFB4-201ENST00000232375 TTBK1Q5TCY1 1321 aaPredicted RBP23.7■■□□□ 1.39
PFKFB4-201ENST00000232375 TOP2AP11388 1531 aaKnown RBP23.7■■□□□ 1.38
PFKFB4-201ENST00000232375 SMARCA2P51531 1590 aa23.61■■□□□ 1.37
PFKFB4-201ENST00000232375 SOGA1O94964 1423 aa23.52■■□□□ 1.36
PFKFB4-201ENST00000232375 UBTFP17480 764 aaKnown RBP23.5■■□□□ 1.35
PFKFB4-201ENST00000232375 EIF4G1Q04637 1599 aaKnown RBP23.46■■□□□ 1.35
PFKFB4-201ENST00000232375 RANGAP1P46060 587 aaPredicted RBP23.45■■□□□ 1.34
PFKFB4-201ENST00000232375 ATAD2BQ9ULI0 1458 aa23.43■■□□□ 1.34
PFKFB4-201ENST00000232375 RUSC2Q8N2Y8 1516 aa23.42■■□□□ 1.34
PFKFB4-201ENST00000232375 BAZ1BQ9UIG0 1483 aaKnown RBP23.4■■□□□ 1.34
PFKFB4-201ENST00000232375 CSRNP3Q8WYN3 585 aa23.38■■□□□ 1.33
PFKFB4-201ENST00000232375 WRNQ14191 1432 aaPredicted RBP eCLIP23.31■■□□□ 1.32
PFKFB4-201ENST00000232375 PEG3Q9GZU2 1588 aa23.17■■□□□ 1.3
PFKFB4-201ENST00000232375 CEP162Q5TB80 1403 aa23.17■■□□□ 1.3
PFKFB4-201ENST00000232375 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.16■■□□□ 1.3
PFKFB4-201ENST00000232375 SYNJ1O43426 1573 aa23.1■■□□□ 1.29
PFKFB4-201ENST00000232375 TNIKQ9UKE5 1360 aa23.04■■□□□ 1.28
PFKFB4-201ENST00000232375 CCER1Q8TC90 406 aaPredicted RBP23.01■■□□□ 1.27
PFKFB4-201ENST00000232375 EEA1Q15075 1411 aa22.97■■□□□ 1.27
PFKFB4-201ENST00000232375 GOLGA3Q08378 1498 aa22.96■■□□□ 1.27
PFKFB4-201ENST00000232375 NCAPD3P42695 1498 aa22.93■■□□□ 1.26
PFKFB4-201ENST00000232375 ZEB1P37275 1124 aaPredicted RBP22.92■■□□□ 1.26
PFKFB4-201ENST00000232375 RAPGEF2Q9Y4G8 1499 aa22.89■■□□□ 1.25
PFKFB4-201ENST00000232375 HNRNPUL2Q1KMD3 747 aaKnown RBP22.85■■□□□ 1.25
PFKFB4-201ENST00000232375 CEP164Q9UPV0 1460 aa22.84■■□□□ 1.25
PFKFB4-201ENST00000232375 CLIP1P30622 1438 aa22.83■■□□□ 1.25
PFKFB4-201ENST00000232375 APLP2Q06481 763 aa22.82■■□□□ 1.24
PFKFB4-201ENST00000232375 HMGXB3Q12766 1538 aa22.75■■□□□ 1.23
PFKFB4-201ENST00000232375 CUX1P39880 1505 aa22.71■■□□□ 1.23
PFKFB4-201ENST00000232375 TOP2BQ02880 1626 aa22.7■■□□□ 1.22
PFKFB4-201ENST00000232375 CFTRP13569 1480 aa22.69■■□□□ 1.22
PFKFB4-201ENST00000232375 DNAJC5BQ9UF47 199 aa22.68■■□□□ 1.22
PFKFB4-201ENST00000232375 CADPSQ9ULU8 1353 aa22.63■■□□□ 1.21
PFKFB4-201ENST00000232375 KIF21BO75037 1637 aa22.6■■□□□ 1.21
PFKFB4-201ENST00000232375 CC2D2AQ9P2K1 1620 aa22.6■■□□□ 1.21
PFKFB4-201ENST00000232375 KIF27Q86VH2 1401 aa22.6■■□□□ 1.21
PFKFB4-201ENST00000232375 VPS8Q8N3P4 1428 aa22.57■■□□□ 1.2
PFKFB4-201ENST00000232375 P3H3Q8IVL6 736 aa22.56■■□□□ 1.2
PFKFB4-201ENST00000232375 CUX2O14529 1486 aa22.55■■□□□ 1.2
PFKFB4-201ENST00000232375 KANK4Q5T7N3 995 aaPredicted RBP22.54■■□□□ 1.2
PFKFB4-201ENST00000232375 ATP1B4Q9UN42 357 aaPredicted RBP22.54■■□□□ 1.2
PFKFB4-201ENST00000232375 NESP48681 1621 aa22.51■■□□□ 1.19
PFKFB4-201ENST00000232375 BIVM-ERCC5R4GMW8 1640 aa22.51■■□□□ 1.19
PFKFB4-201ENST00000232375 PRXQ9BXM0 1461 aa22.5■■□□□ 1.19
PFKFB4-201ENST00000232375 ITGAEP38570 1179 aa22.5■■□□□ 1.19
PFKFB4-201ENST00000232375 IGF1RP08069 1367 aa22.44■■□□□ 1.18
PFKFB4-201ENST00000232375 FGD5Q6ZNL6 1462 aa22.43■■□□□ 1.18
PFKFB4-201ENST00000232375 FANCD2Q9BXW9 1451 aa22.41■■□□□ 1.18
PFKFB4-201ENST00000232375 ARAP1Q96P48 1450 aa22.4■■□□□ 1.18
PFKFB4-201ENST00000232375 RAD54L2Q9Y4B4 1467 aa22.39■■□□□ 1.17
PFKFB4-201ENST00000232375 CARMIL1Q5VZK9 1371 aa22.38■■□□□ 1.17
PFKFB4-201ENST00000232375 ERICH3Q5RHP9 1530 aa22.31■■□□□ 1.16
PFKFB4-201ENST00000232375 DIEXFQ68CQ4 756 aaKnown RBP22.27■■□□□ 1.16
PFKFB4-201ENST00000232375 ARHGAP35Q9NRY4 1499 aa22.27■■□□□ 1.16
PFKFB4-201ENST00000232375 TDRD9Q8NDG6 1382 aaKnown RBP22.25■■□□□ 1.15
PFKFB4-201ENST00000232375 POLA1P09884 1462 aaPredicted RBP22.18■■□□□ 1.14
PFKFB4-201ENST00000232375 TOPBP1Q92547 1522 aa22.17■■□□□ 1.14
PFKFB4-201ENST00000232375 FAM50AQ14320 339 aaKnown RBP22.15■■□□□ 1.14
PFKFB4-201ENST00000232375 ZNF316A6NFI3 1004 aaPredicted RBP22.1■■□□□ 1.13
PFKFB4-201ENST00000232375 FHOD3Q2V2M9 1422 aa22.1■■□□□ 1.13
PFKFB4-201ENST00000232375 ARID3CA6NKF2 412 aa22.07■■□□□ 1.12
PFKFB4-201ENST00000232375 URB2Q14146 1524 aaKnown RBP22.07■■□□□ 1.12
PFKFB4-201ENST00000232375 PRDM2Q13029 1718 aa22.07■■□□□ 1.12
PFKFB4-201ENST00000232375 DNMBPQ6XZF7 1577 aa22.05■■□□□ 1.12
PFKFB4-201ENST00000232375 CCNB3Q8WWL7 1395 aa22.04■■□□□ 1.12
PFKFB4-201ENST00000232375 YTHDC1Q96MU7 727 aaKnown RBP22.03■■□□□ 1.12
PFKFB4-201ENST00000232375 PDS5BQ9NTI5 1447 aa22■■□□□ 1.11
PFKFB4-201ENST00000232375 ABCA10Q8WWZ4 1543 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms