RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 NISCHQ9Y2I1 1504 aa28.13■■■□□ 2.09
PRPF6-201ENST00000266079 CCDC180Q9P1Z9 1646 aa24.46■■□□□ 1.51
PRPF6-201ENST00000266079 DCAF8L2P0C7V8 631 aa23.83■■□□□ 1.41
PRPF6-201ENST00000266079 ABCC9O60706 1549 aa23.81■■□□□ 1.4
PRPF6-201ENST00000266079 ZCCHC6Q5VYS8 1495 aaKnown RBP23.54■■□□□ 1.36
PRPF6-201ENST00000266079 SHROOM4Q9ULL8 1493 aa23.19■■□□□ 1.3
PRPF6-201ENST00000266079 DCAF1Q9Y4B6 1507 aa23.06■■□□□ 1.28
PRPF6-201ENST00000266079 NACADO15069 1562 aa22.93■■□□□ 1.26
PRPF6-201ENST00000266079 RB1CC1Q8TDY2 1594 aa22.86■■□□□ 1.25
PRPF6-201ENST00000266079 MYO15BQ96JP2 1530 aa22.85■■□□□ 1.25
PRPF6-201ENST00000266079 SCRIBQ14160 1630 aa22.78■■□□□ 1.24
PRPF6-201ENST00000266079 PABPN1Q86U42 306 aaKnown RBP eCLIP22.52■■□□□ 1.21e-6■■■□□ 16.1
PRPF6-201ENST00000266079 UNC13AQ9UPW8 1703 aa22.38■■□□□ 1.17
PRPF6-201ENST00000266079 BICRAQ9NZM4 1560 aa22.21■■□□□ 1.15
PRPF6-201ENST00000266079 SUPT5HO00267 1087 aaKnown RBP22.18■■□□□ 1.14
PRPF6-201ENST00000266079 CECR2Q9BXF3 1484 aa22.04■■□□□ 1.12
PRPF6-201ENST00000266079 MROH2BQ7Z745 1585 aa21.82■■□□□ 1.08
PRPF6-201ENST00000266079 RSF1Q96T23 1441 aaPredicted RBP21.8■■□□□ 1.08
PRPF6-201ENST00000266079 BAZ1AQ9NRL2 1556 aaPredicted RBP21.72■■□□□ 1.07
PRPF6-201ENST00000266079 SMARCA4P51532 1647 aa21.67■■□□□ 1.06
PRPF6-201ENST00000266079 WIZO95785 1651 aa21.62■■□□□ 1.05
PRPF6-201ENST00000266079 EIF4G1Q04637 1599 aaKnown RBP21.6■■□□□ 1.05
PRPF6-201ENST00000266079 ATAD2BQ9ULI0 1458 aa21.44■■□□□ 1.02
PRPF6-201ENST00000266079 CC2D2AQ9P2K1 1620 aa21.37■■□□□ 1.01
PRPF6-201ENST00000266079 BAZ1BQ9UIG0 1483 aaKnown RBP21.34■■□□□ 1.01
PRPF6-201ENST00000266079 DNAJC5BQ9UF47 199 aa21.33■■□□□ 1.01
PRPF6-201ENST00000266079 SMARCA2P51531 1590 aa21.33■■□□□ 1
PRPF6-201ENST00000266079 PEG3Q9GZU2 1588 aa21.28■■□□□ 1
PRPF6-201ENST00000266079 TOP2AP11388 1531 aaKnown RBP21.27■■□□□ 1
PRPF6-201ENST00000266079 NCAPD3P42695 1498 aa21.23■□□□□ 0.99
PRPF6-201ENST00000266079 CCDC88BA6NC98 1476 aa21.16■□□□□ 0.98
PRPF6-201ENST00000266079 HMGXB3Q12766 1538 aa21.11■□□□□ 0.97
PRPF6-201ENST00000266079 CHIC1Q5VXU3 224 aa20.9■□□□□ 0.94
PRPF6-201ENST00000266079 HRCP23327 699 aa20.81■□□□□ 0.92
PRPF6-201ENST00000266079 NESP48681 1621 aa20.8■□□□□ 0.92
PRPF6-201ENST00000266079 CADPSQ9ULU8 1353 aa20.76■□□□□ 0.91
PRPF6-201ENST00000266079 TRIM41Q8WV44 630 aa20.74■□□□□ 0.91
PRPF6-201ENST00000266079 ABCC8Q09428 1581 aa20.72■□□□□ 0.91
PRPF6-201ENST00000266079 CFTRP13569 1480 aa20.71■□□□□ 0.91
PRPF6-201ENST00000266079 FAM9AQ8IZU1 332 aaPredicted RBP20.56■□□□□ 0.88
PRPF6-201ENST00000266079 FANCD2Q9BXW9 1451 aa20.55■□□□□ 0.88
PRPF6-201ENST00000266079 WRNQ14191 1432 aaPredicted RBP eCLIP20.55■□□□□ 0.88
PRPF6-201ENST00000266079 LAMC3Q9Y6N6 1575 aa20.52■□□□□ 0.87
PRPF6-201ENST00000266079 PDS5BQ9NTI5 1447 aa20.47■□□□□ 0.87
PRPF6-201ENST00000266079 EHMT2Q96KQ7 1210 aa20.45■□□□□ 0.86
PRPF6-201ENST00000266079 SYNJ1O43426 1573 aa20.45■□□□□ 0.86
PRPF6-201ENST00000266079 CEP164Q9UPV0 1460 aa20.42■□□□□ 0.86
PRPF6-201ENST00000266079 ERCC6Q03468 1493 aa20.41■□□□□ 0.86
PRPF6-201ENST00000266079 PRDM2Q13029 1718 aa20.4■□□□□ 0.86
PRPF6-201ENST00000266079 CUX1P39880 1505 aa20.39■□□□□ 0.85
PRPF6-201ENST00000266079 KIF21AQ7Z4S6 1674 aa20.39■□□□□ 0.85
PRPF6-201ENST00000266079 PCGF6Q9BYE7 350 aa20.32■□□□□ 0.84
PRPF6-201ENST00000266079 URB2Q14146 1524 aaKnown RBP20.3■□□□□ 0.84
PRPF6-201ENST00000266079 SOGA1O94964 1423 aa20.3■□□□□ 0.84
PRPF6-201ENST00000266079 TOP2BQ02880 1626 aa20.29■□□□□ 0.84
PRPF6-201ENST00000266079 PPARGC1BQ86YN6 1023 aaKnown RBP20.27■□□□□ 0.84
PRPF6-201ENST00000266079 TOPBP1Q92547 1522 aa20.27■□□□□ 0.83
PRPF6-201ENST00000266079 LOC105371045A0A1W2PR82 267 aa20.26■□□□□ 0.83
PRPF6-201ENST00000266079 RUSC2Q8N2Y8 1516 aa20.25■□□□□ 0.83
PRPF6-201ENST00000266079 FGD5Q6ZNL6 1462 aa20.24■□□□□ 0.83
PRPF6-201ENST00000266079 BIVM-ERCC5R4GMW8 1640 aa20.21■□□□□ 0.83
PRPF6-201ENST00000266079 DNMBPQ6XZF7 1577 aa20.21■□□□□ 0.83
PRPF6-201ENST00000266079 MRC2Q9UBG0 1479 aa20.21■□□□□ 0.83
PRPF6-201ENST00000266079 RAD54L2Q9Y4B4 1467 aa20.21■□□□□ 0.83
PRPF6-201ENST00000266079 POLA1P09884 1462 aaPredicted RBP20.17■□□□□ 0.82
PRPF6-201ENST00000266079 CUX2O14529 1486 aa20.11■□□□□ 0.81
PRPF6-201ENST00000266079 PELP1Q8IZL8 1130 aaKnown RBP20.11■□□□□ 0.81
PRPF6-201ENST00000266079 CSRNP3Q8WYN3 585 aa20.09■□□□□ 0.81
PRPF6-201ENST00000266079 TDRD9Q8NDG6 1382 aaKnown RBP20.09■□□□□ 0.81
PRPF6-201ENST00000266079 THOC2Q8NI27 1593 aaKnown RBP20.06■□□□□ 0.8
PRPF6-201ENST00000266079 WDR62O43379 1518 aa20.04■□□□□ 0.8
PRPF6-201ENST00000266079 KIF27Q86VH2 1401 aa20.03■□□□□ 0.8
PRPF6-201ENST00000266079 AQRO60306 1485 aaKnown RBP eCLIP19.97■□□□□ 0.796e-7■■■■■ 26.9
PRPF6-201ENST00000266079 ZNF608Q9ULD9 1512 aaPredicted RBP19.96■□□□□ 0.79
PRPF6-201ENST00000266079 UBTFP17480 764 aaKnown RBP19.96■□□□□ 0.79
PRPF6-201ENST00000266079 ABCA10Q8WWZ4 1543 aa19.96■□□□□ 0.79
PRPF6-201ENST00000266079 EEA1Q15075 1411 aa19.95■□□□□ 0.78
PRPF6-201ENST00000266079 RANGAP1P46060 587 aaPredicted RBP19.94■□□□□ 0.78
PRPF6-201ENST00000266079 TARBP1Q13395 1621 aaKnown RBP19.91■□□□□ 0.78
PRPF6-201ENST00000266079 IGF1RP08069 1367 aa19.91■□□□□ 0.78
PRPF6-201ENST00000266079 IFT140Q96RY7 1462 aa19.9■□□□□ 0.78
PRPF6-201ENST00000266079 GAPVD1Q14C86 1478 aa19.88■□□□□ 0.77
PRPF6-201ENST00000266079 RAPGEF2Q9Y4G8 1499 aa19.85■□□□□ 0.77
PRPF6-201ENST00000266079 CARMIL1Q5VZK9 1371 aa19.83■□□□□ 0.76
PRPF6-201ENST00000266079 WDR97A6NE52 1622 aa19.82■□□□□ 0.76
PRPF6-201ENST00000266079 FBLN2P98095 1184 aa19.81■□□□□ 0.76
PRPF6-201ENST00000266079 ABCA5Q8WWZ7 1642 aa19.78■□□□□ 0.76
PRPF6-201ENST00000266079 GOLGA3Q08378 1498 aa19.78■□□□□ 0.76
PRPF6-201ENST00000266079 PRXQ9BXM0 1461 aa19.77■□□□□ 0.75
PRPF6-201ENST00000266079 EIF4G3O43432 1585 aaKnown RBP19.76■□□□□ 0.75
PRPF6-201ENST00000266079 TRIM26Q12899 539 aaPredicted RBP19.76■□□□□ 0.75
PRPF6-201ENST00000266079 GRIN2BQ13224 1484 aa19.73■□□□□ 0.75
PRPF6-201ENST00000266079 KIF21BO75037 1637 aa19.7■□□□□ 0.74
PRPF6-201ENST00000266079 SNAPC4Q5SXM2 1469 aa19.7■□□□□ 0.74
PRPF6-201ENST00000266079 ERICH3Q5RHP9 1530 aa19.68■□□□□ 0.74
PRPF6-201ENST00000266079 CHMP7Q8WUX9 453 aaPredicted RBP19.68■□□□□ 0.74
PRPF6-201ENST00000266079 PBRM1Q86U86 1689 aa19.67■□□□□ 0.74
PRPF6-201ENST00000266079 TNIKQ9UKE5 1360 aa19.65■□□□□ 0.74
PRPF6-201ENST00000266079 ZEB1P37275 1124 aaPredicted RBP19.65■□□□□ 0.74
PRPF6-201ENST00000266079 SCAF1Q9H7N4 1312 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms