RNA–Protein interactions for RNA: ENST00000371482.5

NSMF-207, Transcript of NMDA receptor synaptonuclear signaling and neuronal migration factor, humanhuman

TSL 1 (best)

Gene NSMF, Length 2,888 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMF-207ENST00000371482 NISCHQ9Y2I1 1504 aa32.96■■■□□ 2.87
NSMF-207ENST00000371482 SHROOM4Q9ULL8 1493 aa28.93■■■□□ 2.22
NSMF-207ENST00000371482 SUPT5HO00267 1087 aaKnown RBP28.34■■■□□ 2.13
NSMF-207ENST00000371482 DCAF8L2P0C7V8 631 aa28.21■■■□□ 2.11
NSMF-207ENST00000371482 ZCCHC6Q5VYS8 1495 aaKnown RBP27.88■■■□□ 2.05
NSMF-207ENST00000371482 CCDC180Q9P1Z9 1646 aa27.74■■■□□ 2.03
NSMF-207ENST00000371482 CHIC1Q5VXU3 224 aa27.31■■□□□ 1.96
NSMF-207ENST00000371482 MYO15BQ96JP2 1530 aa27.3■■□□□ 1.96
NSMF-207ENST00000371482 DCAF1Q9Y4B6 1507 aa26.85■■□□□ 1.89
NSMF-207ENST00000371482 PCGF6Q9BYE7 350 aa26.8■■□□□ 1.88
NSMF-207ENST00000371482 HRCP23327 699 aa26.78■■□□□ 1.88
NSMF-207ENST00000371482 LOC105371045A0A1W2PR82 267 aa26.75■■□□□ 1.87
NSMF-207ENST00000371482 EHMT2Q96KQ7 1210 aa26.5■■□□□ 1.83
NSMF-207ENST00000371482 SCRIBQ14160 1630 aa26.48■■□□□ 1.83
NSMF-207ENST00000371482 PPARGC1BQ86YN6 1023 aaKnown RBP26.43■■□□□ 1.82
NSMF-207ENST00000371482 FAM9AQ8IZU1 332 aaPredicted RBP26.34■■□□□ 1.81
NSMF-207ENST00000371482 ABCC9O60706 1549 aa26.34■■□□□ 1.81
NSMF-207ENST00000371482 RSF1Q96T23 1441 aaPredicted RBP26.24■■□□□ 1.79
NSMF-207ENST00000371482 TRIM41Q8WV44 630 aa26.09■■□□□ 1.77
NSMF-207ENST00000371482 TRIM26Q12899 539 aaPredicted RBP26.06■■□□□ 1.76
NSMF-207ENST00000371482 RB1CC1Q8TDY2 1594 aa26.02■■□□□ 1.76
NSMF-207ENST00000371482 CECR2Q9BXF3 1484 aa25.95■■□□□ 1.74
NSMF-207ENST00000371482 MROH2BQ7Z745 1585 aa25.73■■□□□ 1.71
NSMF-207ENST00000371482 NACADO15069 1562 aa25.67■■□□□ 1.7
NSMF-207ENST00000371482 WIZO95785 1651 aa25.63■■□□□ 1.69
NSMF-207ENST00000371482 TTBK1Q5TCY1 1321 aaPredicted RBP25.57■■□□□ 1.68
NSMF-207ENST00000371482 ZEB1P37275 1124 aaPredicted RBP25.44■■□□□ 1.66
NSMF-207ENST00000371482 PABPN1Q86U42 306 aaKnown RBP eCLIP25.42■■□□□ 1.662e-9■■■□□ 16.1
NSMF-207ENST00000371482 BAZ1AQ9NRL2 1556 aaPredicted RBP25.32■■□□□ 1.64
NSMF-207ENST00000371482 ABCC8Q09428 1581 aa25.24■■□□□ 1.63
NSMF-207ENST00000371482 EIF4G1Q04637 1599 aaKnown RBP25.21■■□□□ 1.63
NSMF-207ENST00000371482 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.17■■□□□ 1.62
NSMF-207ENST00000371482 CCDC88BA6NC98 1476 aa25.12■■□□□ 1.61
NSMF-207ENST00000371482 TOP2AP11388 1531 aaKnown RBP25.07■■□□□ 1.6
NSMF-207ENST00000371482 SMARCA4P51532 1647 aa25.05■■□□□ 1.6
NSMF-207ENST00000371482 CCER1Q8TC90 406 aaPredicted RBP25.03■■□□□ 1.6
NSMF-207ENST00000371482 SOGA1O94964 1423 aa25.01■■□□□ 1.59
NSMF-207ENST00000371482 SMARCA2P51531 1590 aa25■■□□□ 1.59
NSMF-207ENST00000371482 RANGAP1P46060 587 aaPredicted RBP24.98■■□□□ 1.59
NSMF-207ENST00000371482 UNC13AQ9UPW8 1703 aa24.98■■□□□ 1.59
NSMF-207ENST00000371482 UBTFP17480 764 aaKnown RBP24.97■■□□□ 1.59
NSMF-207ENST00000371482 RUSC2Q8N2Y8 1516 aa24.94■■□□□ 1.58
NSMF-207ENST00000371482 SCAF1Q9H7N4 1312 aaKnown RBP24.9■■□□□ 1.58
NSMF-207ENST00000371482 CEP162Q5TB80 1403 aa24.9■■□□□ 1.58
NSMF-207ENST00000371482 CSRNP3Q8WYN3 585 aa24.82■■□□□ 1.56
NSMF-207ENST00000371482 WRNQ14191 1432 aaPredicted RBP eCLIP24.78■■□□□ 1.56
NSMF-207ENST00000371482 TNIKQ9UKE5 1360 aa24.77■■□□□ 1.56
NSMF-207ENST00000371482 BICRAQ9NZM4 1560 aa24.67■■□□□ 1.54
NSMF-207ENST00000371482 DIEXFQ68CQ4 756 aaKnown RBP24.62■■□□□ 1.53
NSMF-207ENST00000371482 EEA1Q15075 1411 aa24.62■■□□□ 1.53
NSMF-207ENST00000371482 HNRNPUL2Q1KMD3 747 aaKnown RBP24.59■■□□□ 1.53
NSMF-207ENST00000371482 GOLGA3Q08378 1498 aa24.58■■□□□ 1.53
NSMF-207ENST00000371482 NEUROD1Q13562 356 aa24.56■■□□□ 1.52
NSMF-207ENST00000371482 SYNJ1O43426 1573 aa24.52■■□□□ 1.52
NSMF-207ENST00000371482 ACIN1Q9UKV3 1341 aaKnown RBP24.51■■□□□ 1.51
NSMF-207ENST00000371482 PEG3Q9GZU2 1588 aa24.45■■□□□ 1.5
NSMF-207ENST00000371482 BAZ1BQ9UIG0 1483 aaKnown RBP24.42■■□□□ 1.5
NSMF-207ENST00000371482 ATAD2BQ9ULI0 1458 aa24.41■■□□□ 1.5
NSMF-207ENST00000371482 CEP164Q9UPV0 1460 aa24.4■■□□□ 1.5
NSMF-207ENST00000371482 CLIP1P30622 1438 aa24.38■■□□□ 1.49
NSMF-207ENST00000371482 RAPGEF2Q9Y4G8 1499 aa24.33■■□□□ 1.49
NSMF-207ENST00000371482 ZNF316A6NFI3 1004 aaPredicted RBP24.33■■□□□ 1.49
NSMF-207ENST00000371482 GTF3C3Q9Y5Q9 886 aa24.32■■□□□ 1.48
NSMF-207ENST00000371482 KIF21BO75037 1637 aa24.32■■□□□ 1.48
NSMF-207ENST00000371482 PELP1Q8IZL8 1130 aaKnown RBP24.27■■□□□ 1.48
NSMF-207ENST00000371482 APLP2Q06481 763 aa24.27■■□□□ 1.48
NSMF-207ENST00000371482 CENPBP07199 599 aaPredicted RBP24.26■■□□□ 1.47
NSMF-207ENST00000371482 YTHDC1Q96MU7 727 aaKnown RBP24.26■■□□□ 1.47
NSMF-207ENST00000371482 VPS8Q8N3P4 1428 aa24.25■■□□□ 1.47
NSMF-207ENST00000371482 MIER1Q8N108 512 aa24.13■■□□□ 1.45
NSMF-207ENST00000371482 TOP2BQ02880 1626 aa24.11■■□□□ 1.45
NSMF-207ENST00000371482 ITGAEP38570 1179 aa24.08■■□□□ 1.45
NSMF-207ENST00000371482 KANK4Q5T7N3 995 aaPredicted RBP24.05■■□□□ 1.44
NSMF-207ENST00000371482 BIVM-ERCC5R4GMW8 1640 aa23.96■■□□□ 1.43
NSMF-207ENST00000371482 PRXQ9BXM0 1461 aa23.96■■□□□ 1.43
NSMF-207ENST00000371482 ARAP1Q96P48 1450 aa23.95■■□□□ 1.42
NSMF-207ENST00000371482 CUX1P39880 1505 aa23.91■■□□□ 1.42
NSMF-207ENST00000371482 ERICH3Q5RHP9 1530 aa23.88■■□□□ 1.41
NSMF-207ENST00000371482 P3H3Q8IVL6 736 aa23.86■■□□□ 1.41
NSMF-207ENST00000371482 DHX57Q6P158 1386 aaKnown RBP23.86■■□□□ 1.41
NSMF-207ENST00000371482 ATP1B4Q9UN42 357 aaPredicted RBP23.86■■□□□ 1.41
NSMF-207ENST00000371482 NCAPD3P42695 1498 aa23.82■■□□□ 1.4
NSMF-207ENST00000371482 KIF27Q86VH2 1401 aa23.82■■□□□ 1.4
NSMF-207ENST00000371482 HMGXB3Q12766 1538 aa23.76■■□□□ 1.39
NSMF-207ENST00000371482 CFTRP13569 1480 aa23.73■■□□□ 1.39
NSMF-207ENST00000371482 ARHGAP35Q9NRY4 1499 aa23.72■■□□□ 1.39
NSMF-207ENST00000371482 CUX2O14529 1486 aa23.7■■□□□ 1.38
NSMF-207ENST00000371482 CLSPNQ9HAW4 1339 aa23.69■■□□□ 1.38
NSMF-207ENST00000371482 RRBP1Q9P2E9 1410 aaKnown RBP23.69■■□□□ 1.38
NSMF-207ENST00000371482 CCNB3Q8WWL7 1395 aa23.65■■□□□ 1.38
NSMF-207ENST00000371482 IGF1RP08069 1367 aa23.61■■□□□ 1.37
NSMF-207ENST00000371482 FAM50AQ14320 339 aaKnown RBP23.59■■□□□ 1.37
NSMF-207ENST00000371482 FGD5Q6ZNL6 1462 aa23.52■■□□□ 1.36
NSMF-207ENST00000371482 RAB3GAP2Q9H2M9 1393 aa23.52■■□□□ 1.36
NSMF-207ENST00000371482 CARMIL1Q5VZK9 1371 aa23.51■■□□□ 1.35
NSMF-207ENST00000371482 CADPSQ9ULU8 1353 aa23.5■■□□□ 1.35
NSMF-207ENST00000371482 RAD54L2Q9Y4B4 1467 aa23.47■■□□□ 1.35
NSMF-207ENST00000371482 HIRIP3Q9BW71 556 aaPredicted RBP23.46■■□□□ 1.35
NSMF-207ENST00000371482 SIN3AQ96ST3 1273 aa23.45■■□□□ 1.34
NSMF-207ENST00000371482 NESP48681 1621 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms