RNA–Protein interactions for RNA: ENST00000604975.1

TPM2-207, Transcript of tropomyosin 2, humanhuman

TSL 5

Gene TPM2, Length 573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-207ENST00000604975 NISCHQ9Y2I1 1504 aa34.86■■■■□ 3.17
TPM2-207ENST00000604975 CCDC180Q9P1Z9 1646 aa30.95■■■□□ 2.54
TPM2-207ENST00000604975 ABCC9O60706 1549 aa30.41■■■□□ 2.46
TPM2-207ENST00000604975 DCAF8L2P0C7V8 631 aa29.3■■■□□ 2.28
TPM2-207ENST00000604975 RB1CC1Q8TDY2 1594 aa29.21■■■□□ 2.27
TPM2-207ENST00000604975 NACADO15069 1562 aa29.17■■■□□ 2.26
TPM2-207ENST00000604975 ZCCHC6Q5VYS8 1495 aaKnown RBP29.04■■■□□ 2.24
TPM2-207ENST00000604975 MYO15BQ96JP2 1530 aa28.97■■■□□ 2.23
TPM2-207ENST00000604975 DCAF1Q9Y4B6 1507 aa28.84■■■□□ 2.21
TPM2-207ENST00000604975 PABPN1Q86U42 306 aaKnown RBP eCLIP28.45■■■□□ 2.141e-8■■■□□ 16
TPM2-207ENST00000604975 UNC13AQ9UPW8 1703 aa28.37■■■□□ 2.13
TPM2-207ENST00000604975 SCRIBQ14160 1630 aa28.29■■■□□ 2.12
TPM2-207ENST00000604975 BICRAQ9NZM4 1560 aa28.24■■■□□ 2.11
TPM2-207ENST00000604975 SHROOM4Q9ULL8 1493 aa28.03■■■□□ 2.08
TPM2-207ENST00000604975 DNAJC5BQ9UF47 199 aa27.9■■■□□ 2.06
TPM2-207ENST00000604975 EIF4G1Q04637 1599 aaKnown RBP27.56■■■□□ 2
TPM2-207ENST00000604975 CC2D2AQ9P2K1 1620 aa27.45■■□□□ 1.98
TPM2-207ENST00000604975 CECR2Q9BXF3 1484 aa27.33■■□□□ 1.97
TPM2-207ENST00000604975 BAZ1AQ9NRL2 1556 aaPredicted RBP27.04■■□□□ 1.92
TPM2-207ENST00000604975 SMARCA4P51532 1647 aa27.03■■□□□ 1.92
TPM2-207ENST00000604975 ATAD2BQ9ULI0 1458 aa26.94■■□□□ 1.9
TPM2-207ENST00000604975 NCAPD3P42695 1498 aa26.93■■□□□ 1.9
TPM2-207ENST00000604975 SMARCA2P51531 1590 aa26.91■■□□□ 1.9
TPM2-207ENST00000604975 MROH2BQ7Z745 1585 aa26.86■■□□□ 1.89
TPM2-207ENST00000604975 HMGXB3Q12766 1538 aa26.76■■□□□ 1.87
TPM2-207ENST00000604975 PEG3Q9GZU2 1588 aa26.75■■□□□ 1.87
TPM2-207ENST00000604975 BAZ1BQ9UIG0 1483 aaKnown RBP26.74■■□□□ 1.87
TPM2-207ENST00000604975 RSF1Q96T23 1441 aaPredicted RBP26.57■■□□□ 1.84
TPM2-207ENST00000604975 WIZO95785 1651 aa26.53■■□□□ 1.84
TPM2-207ENST00000604975 TOP2AP11388 1531 aaKnown RBP26.3■■□□□ 1.8
TPM2-207ENST00000604975 NESP48681 1621 aa26.26■■□□□ 1.79
TPM2-207ENST00000604975 ERCC6Q03468 1493 aa26.26■■□□□ 1.79
TPM2-207ENST00000604975 LAMC3Q9Y6N6 1575 aa26.2■■□□□ 1.79
TPM2-207ENST00000604975 CADPSQ9ULU8 1353 aa26.18■■□□□ 1.78
TPM2-207ENST00000604975 PDS5BQ9NTI5 1447 aa26.11■■□□□ 1.77
TPM2-207ENST00000604975 CCDC88BA6NC98 1476 aa26■■□□□ 1.75
TPM2-207ENST00000604975 SUPT5HO00267 1087 aaKnown RBP25.99■■□□□ 1.75
TPM2-207ENST00000604975 CFTRP13569 1480 aa25.98■■□□□ 1.75
TPM2-207ENST00000604975 CUX2O14529 1486 aa25.94■■□□□ 1.74
TPM2-207ENST00000604975 KIF21AQ7Z4S6 1674 aa25.87■■□□□ 1.73
TPM2-207ENST00000604975 FANCD2Q9BXW9 1451 aa25.86■■□□□ 1.73
TPM2-207ENST00000604975 CEP164Q9UPV0 1460 aa25.85■■□□□ 1.73
TPM2-207ENST00000604975 THOC2Q8NI27 1593 aaKnown RBP25.82■■□□□ 1.72
TPM2-207ENST00000604975 MRC2Q9UBG0 1479 aa25.8■■□□□ 1.72
TPM2-207ENST00000604975 WDR62O43379 1518 aa25.67■■□□□ 1.7
TPM2-207ENST00000604975 PRDM2Q13029 1718 aa25.64■■□□□ 1.7
TPM2-207ENST00000604975 URB2Q14146 1524 aaKnown RBP25.56■■□□□ 1.68
TPM2-207ENST00000604975 ABCC8Q09428 1581 aa25.46■■□□□ 1.67
TPM2-207ENST00000604975 TOPBP1Q92547 1522 aa25.42■■□□□ 1.66
TPM2-207ENST00000604975 DNMBPQ6XZF7 1577 aa25.38■■□□□ 1.65
TPM2-207ENST00000604975 IFT140Q96RY7 1462 aa25.31■■□□□ 1.64
TPM2-207ENST00000604975 POLA1P09884 1462 aaPredicted RBP25.21■■□□□ 1.63
TPM2-207ENST00000604975 DNAJC5Q9H3Z4 198 aa25.2■■□□□ 1.62
TPM2-207ENST00000604975 CUX1P39880 1505 aa25.2■■□□□ 1.62
TPM2-207ENST00000604975 FGD5Q6ZNL6 1462 aa25.15■■□□□ 1.62
TPM2-207ENST00000604975 SOGA1O94964 1423 aa25.15■■□□□ 1.62
TPM2-207ENST00000604975 ZNF608Q9ULD9 1512 aaPredicted RBP25.15■■□□□ 1.62
TPM2-207ENST00000604975 RAD54L2Q9Y4B4 1467 aa25.11■■□□□ 1.61
TPM2-207ENST00000604975 WRNQ14191 1432 aaPredicted RBP eCLIP25.1■■□□□ 1.61
TPM2-207ENST00000604975 TARBP1Q13395 1621 aaKnown RBP25.08■■□□□ 1.61
TPM2-207ENST00000604975 AQRO60306 1485 aaKnown RBP eCLIP25.03■■□□□ 1.6
TPM2-207ENST00000604975 EIF4G3O43432 1585 aaKnown RBP25.01■■□□□ 1.59
TPM2-207ENST00000604975 TDRD9Q8NDG6 1382 aaKnown RBP25.01■■□□□ 1.59
TPM2-207ENST00000604975 TOP2BQ02880 1626 aa24.97■■□□□ 1.59
TPM2-207ENST00000604975 SYNJ1O43426 1573 aa24.95■■□□□ 1.58
TPM2-207ENST00000604975 BIVM-ERCC5R4GMW8 1640 aa24.94■■□□□ 1.58
TPM2-207ENST00000604975 OSCARQ8IYS5 282 aa24.93■■□□□ 1.58
TPM2-207ENST00000604975 WDR97A6NE52 1622 aa24.93■■□□□ 1.58
TPM2-207ENST00000604975 ABCA10Q8WWZ4 1543 aa24.9■■□□□ 1.58
TPM2-207ENST00000604975 GRIN2BQ13224 1484 aa24.85■■□□□ 1.57
TPM2-207ENST00000604975 GAPVD1Q14C86 1478 aa24.84■■□□□ 1.57
TPM2-207ENST00000604975 FBLN2P98095 1184 aa24.84■■□□□ 1.57
TPM2-207ENST00000604975 SNAPC4Q5SXM2 1469 aa24.8■■□□□ 1.56
TPM2-207ENST00000604975 MAGI1Q96QZ7 1491 aaPredicted RBP24.77■■□□□ 1.56
TPM2-207ENST00000604975 CHMP7Q8WUX9 453 aaPredicted RBP24.75■■□□□ 1.55
TPM2-207ENST00000604975 ABCA5Q8WWZ7 1642 aa24.75■■□□□ 1.55
TPM2-207ENST00000604975 SYNJ2O15056 1496 aa24.68■■□□□ 1.54
TPM2-207ENST00000604975 PBRM1Q86U86 1689 aa24.68■■□□□ 1.54
TPM2-207ENST00000604975 CHD1O14646 1710 aa24.66■■□□□ 1.54
TPM2-207ENST00000604975 ERICH3Q5RHP9 1530 aa24.6■■□□□ 1.53
TPM2-207ENST00000604975 KIF27Q86VH2 1401 aa24.6■■□□□ 1.53
TPM2-207ENST00000604975 FHAD1B1AJZ9 1412 aa24.57■■□□□ 1.52
TPM2-207ENST00000604975 TRIM41Q8WV44 630 aa24.56■■□□□ 1.52
TPM2-207ENST00000604975 ADAMTS12P58397 1594 aa24.54■■□□□ 1.52
TPM2-207ENST00000604975 GRIN2AQ12879 1464 aa24.51■■□□□ 1.51
TPM2-207ENST00000604975 IGF1RP08069 1367 aa24.46■■□□□ 1.51
TPM2-207ENST00000604975 CLASP1Q7Z460 1538 aa24.45■■□□□ 1.5
TPM2-207ENST00000604975 ARHGEF11O15085 1522 aa24.44■■□□□ 1.5
TPM2-207ENST00000604975 RIMBP3CA6NJZ7 1639 aa24.4■■□□□ 1.5
TPM2-207ENST00000604975 RIMBP3BA6NNM3 1639 aa24.4■■□□□ 1.5
TPM2-207ENST00000604975 RIMBP3Q9UFD9 1639 aa24.4■■□□□ 1.5
TPM2-207ENST00000604975 NUP160Q12769 1436 aa24.39■■□□□ 1.5
TPM2-207ENST00000604975 CARMIL1Q5VZK9 1371 aa24.35■■□□□ 1.49
TPM2-207ENST00000604975 CUL7Q14999 1698 aa24.34■■□□□ 1.49
TPM2-207ENST00000604975 CEP170Q5SW79 1584 aa24.33■■□□□ 1.49
TPM2-207ENST00000604975 CYB5RLQ6IPT4 315 aa24.3■■□□□ 1.48
TPM2-207ENST00000604975 RUSC2Q8N2Y8 1516 aa24.29■■□□□ 1.48
TPM2-207ENST00000604975 ARAP1Q96P48 1450 aa24.24■■□□□ 1.47
TPM2-207ENST00000604975 JPH4Q96JJ6 628 aa24.21■■□□□ 1.47
TPM2-207ENST00000604975 CHIC1Q5VXU3 224 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms