RNA–Protein interactions for RNA: ENST00000481613.1

GGA1-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-219ENST00000481613 NISCHQ9Y2I1 1504 aa25.99■■□□□ 1.75
GGA1-219ENST00000481613 ABCC9O60706 1549 aa23.9■■□□□ 1.42
GGA1-219ENST00000481613 CCDC180Q9P1Z9 1646 aa23.32■■□□□ 1.32
GGA1-219ENST00000481613 DNAJC5BQ9UF47 199 aa23.07■■□□□ 1.28
GGA1-219ENST00000481613 RB1CC1Q8TDY2 1594 aa22.43■■□□□ 1.18
GGA1-219ENST00000481613 PABPN1Q86U42 306 aaKnown RBP eCLIP22.29■■□□□ 1.166e-10■■■□□ 16.1
GGA1-219ENST00000481613 NACADO15069 1562 aa22.23■■□□□ 1.15
GGA1-219ENST00000481613 DCAF8L2P0C7V8 631 aa22.12■■□□□ 1.13
GGA1-219ENST00000481613 BICRAQ9NZM4 1560 aa21.99■■□□□ 1.11
GGA1-219ENST00000481613 UNC13AQ9UPW8 1703 aa21.97■■□□□ 1.11
GGA1-219ENST00000481613 MYO15BQ96JP2 1530 aa21.83■■□□□ 1.09
GGA1-219ENST00000481613 CECR2Q9BXF3 1484 aa21.54■■□□□ 1.04
GGA1-219ENST00000481613 CC2D2AQ9P2K1 1620 aa21.53■■□□□ 1.04
GGA1-219ENST00000481613 ZCCHC6Q5VYS8 1495 aaKnown RBP21.43■■□□□ 1.02
GGA1-219ENST00000481613 SHROOM4Q9ULL8 1493 aa21.43■■□□□ 1.02
GGA1-219ENST00000481613 DCAF1Q9Y4B6 1507 aa21.4■■□□□ 1.02
GGA1-219ENST00000481613 EIF4G1Q04637 1599 aaKnown RBP21.38■■□□□ 1.01
GGA1-219ENST00000481613 DNAJC5Q9H3Z4 198 aa21.34■■□□□ 1.01
GGA1-219ENST00000481613 SCRIBQ14160 1630 aa21.29■■□□□ 1
GGA1-219ENST00000481613 CUX2O14529 1486 aa20.68■□□□□ 0.9
GGA1-219ENST00000481613 NCAPD3P42695 1498 aa20.65■□□□□ 0.9
GGA1-219ENST00000481613 ERCC6Q03468 1493 aa20.52■□□□□ 0.88
GGA1-219ENST00000481613 ATAD2BQ9ULI0 1458 aa20.52■□□□□ 0.88
GGA1-219ENST00000481613 NESP48681 1621 aa20.48■□□□□ 0.87
GGA1-219ENST00000481613 HMGXB3Q12766 1538 aa20.32■□□□□ 0.84
GGA1-219ENST00000481613 SMARCA4P51532 1647 aa20.29■□□□□ 0.84
GGA1-219ENST00000481613 SMARCA2P51531 1590 aa20.29■□□□□ 0.84
GGA1-219ENST00000481613 THOC2Q8NI27 1593 aaKnown RBP20.23■□□□□ 0.83
GGA1-219ENST00000481613 BAZ1BQ9UIG0 1483 aaKnown RBP20.18■□□□□ 0.82
GGA1-219ENST00000481613 PEG3Q9GZU2 1588 aa20.13■□□□□ 0.81
GGA1-219ENST00000481613 TRIM41Q8WV44 630 aa20.11■□□□□ 0.81
GGA1-219ENST00000481613 BAZ1AQ9NRL2 1556 aaPredicted RBP20.1■□□□□ 0.81
GGA1-219ENST00000481613 LAMC3Q9Y6N6 1575 aa20.1■□□□□ 0.81
GGA1-219ENST00000481613 MROH2BQ7Z745 1585 aa20.08■□□□□ 0.8
GGA1-219ENST00000481613 KIF21AQ7Z4S6 1674 aa20.03■□□□□ 0.8
GGA1-219ENST00000481613 PDS5BQ9NTI5 1447 aa20.03■□□□□ 0.8
GGA1-219ENST00000481613 CADPSQ9ULU8 1353 aa19.99■□□□□ 0.79
GGA1-219ENST00000481613 MRC2Q9UBG0 1479 aa19.88■□□□□ 0.77
GGA1-219ENST00000481613 WDR62O43379 1518 aa19.86■□□□□ 0.77
GGA1-219ENST00000481613 OSCARQ8IYS5 282 aa19.77■□□□□ 0.76
GGA1-219ENST00000481613 WIZO95785 1651 aa19.75■□□□□ 0.75
GGA1-219ENST00000481613 FANCD2Q9BXW9 1451 aa19.7■□□□□ 0.74
GGA1-219ENST00000481613 CEP164Q9UPV0 1460 aa19.69■□□□□ 0.74
GGA1-219ENST00000481613 CFTRP13569 1480 aa19.67■□□□□ 0.74
GGA1-219ENST00000481613 URB2Q14146 1524 aaKnown RBP19.63■□□□□ 0.73
GGA1-219ENST00000481613 RSF1Q96T23 1441 aaPredicted RBP19.53■□□□□ 0.72
GGA1-219ENST00000481613 RIMBP3CA6NJZ7 1639 aa19.48■□□□□ 0.71
GGA1-219ENST00000481613 RIMBP3BA6NNM3 1639 aa19.48■□□□□ 0.71
GGA1-219ENST00000481613 RIMBP3Q9UFD9 1639 aa19.48■□□□□ 0.71
GGA1-219ENST00000481613 ZNF608Q9ULD9 1512 aaPredicted RBP19.48■□□□□ 0.71
GGA1-219ENST00000481613 TOP2AP11388 1531 aaKnown RBP19.41■□□□□ 0.7
GGA1-219ENST00000481613 ARHGEF11O15085 1522 aa19.4■□□□□ 0.7
GGA1-219ENST00000481613 CYB5RLQ6IPT4 315 aa19.37■□□□□ 0.69
GGA1-219ENST00000481613 IFT140Q96RY7 1462 aa19.35■□□□□ 0.69
GGA1-219ENST00000481613 CCDC88BA6NC98 1476 aa19.32■□□□□ 0.68
GGA1-219ENST00000481613 TOPBP1Q92547 1522 aa19.3■□□□□ 0.68
GGA1-219ENST00000481613 AQRO60306 1485 aaKnown RBP eCLIP19.25■□□□□ 0.67
GGA1-219ENST00000481613 ARAP1Q96P48 1450 aa19.23■□□□□ 0.67
GGA1-219ENST00000481613 PRDM2Q13029 1718 aa19.19■□□□□ 0.66
GGA1-219ENST00000481613 EIF4G3O43432 1585 aaKnown RBP19.19■□□□□ 0.66
GGA1-219ENST00000481613 TRHP20396 242 aaPredicted RBP19.17■□□□□ 0.66
GGA1-219ENST00000481613 TARBP1Q13395 1621 aaKnown RBP19.17■□□□□ 0.66
GGA1-219ENST00000481613 ABCC8Q09428 1581 aa19.14■□□□□ 0.65
GGA1-219ENST00000481613 FBLN2P98095 1184 aa19.12■□□□□ 0.65
GGA1-219ENST00000481613 DNMBPQ6XZF7 1577 aa19.11■□□□□ 0.65
GGA1-219ENST00000481613 CHD1O14646 1710 aa19.11■□□□□ 0.65
GGA1-219ENST00000481613 POLA1P09884 1462 aaPredicted RBP19.09■□□□□ 0.65
GGA1-219ENST00000481613 RAD54L2Q9Y4B4 1467 aa19.08■□□□□ 0.64
GGA1-219ENST00000481613 TDRD9Q8NDG6 1382 aaKnown RBP19.07■□□□□ 0.64
GGA1-219ENST00000481613 SOGA1O94964 1423 aa19■□□□□ 0.63
GGA1-219ENST00000481613 CLASP1Q7Z460 1538 aa18.98■□□□□ 0.63
GGA1-219ENST00000481613 SNAPC4Q5SXM2 1469 aa18.94■□□□□ 0.62
GGA1-219ENST00000481613 CHMP7Q8WUX9 453 aaPredicted RBP18.91■□□□□ 0.62
GGA1-219ENST00000481613 FGD5Q6ZNL6 1462 aa18.88■□□□□ 0.61
GGA1-219ENST00000481613 CUX1P39880 1505 aa18.85■□□□□ 0.61
GGA1-219ENST00000481613 AEBP2Q6ZN18 517 aaPredicted RBP18.84■□□□□ 0.61
GGA1-219ENST00000481613 MAGI1Q96QZ7 1491 aaPredicted RBP18.84■□□□□ 0.61
GGA1-219ENST00000481613 GRIN2BQ13224 1484 aa18.83■□□□□ 0.6
GGA1-219ENST00000481613 SYNJ2O15056 1496 aa18.81■□□□□ 0.6
GGA1-219ENST00000481613 SYNJ1O43426 1573 aa18.8■□□□□ 0.6
GGA1-219ENST00000481613 GAPVD1Q14C86 1478 aa18.79■□□□□ 0.6
GGA1-219ENST00000481613 SUPT5HO00267 1087 aaKnown RBP18.79■□□□□ 0.6
GGA1-219ENST00000481613 WDR97A6NE52 1622 aa18.78■□□□□ 0.6
GGA1-219ENST00000481613 ERCC6L2Q5T890 1561 aa18.74■□□□□ 0.59
GGA1-219ENST00000481613 ABCA10Q8WWZ4 1543 aa18.66■□□□□ 0.58
GGA1-219ENST00000481613 ABCA5Q8WWZ7 1642 aa18.62■□□□□ 0.57
GGA1-219ENST00000481613 PBRM1Q86U86 1689 aa18.61■□□□□ 0.57
GGA1-219ENST00000481613 NUP160Q12769 1436 aa18.61■□□□□ 0.57
GGA1-219ENST00000481613 GRIN2AQ12879 1464 aa18.59■□□□□ 0.57
GGA1-219ENST00000481613 CEP170Q5SW79 1584 aa18.57■□□□□ 0.56
GGA1-219ENST00000481613 SHROOM2Q13796 1616 aa18.5■□□□□ 0.55
GGA1-219ENST00000481613 WRNQ14191 1432 aaPredicted RBP eCLIP18.48■□□□□ 0.55
GGA1-219ENST00000481613 ADAMTS12P58397 1594 aa18.47■□□□□ 0.55
GGA1-219ENST00000481613 JPH4Q96JJ6 628 aa18.47■□□□□ 0.55
GGA1-219ENST00000481613 FHAD1B1AJZ9 1412 aa18.47■□□□□ 0.55
GGA1-219ENST00000481613 KIF13AQ9H1H9 1805 aa18.46■□□□□ 0.55
GGA1-219ENST00000481613 PRG4Q92954 1404 aaPredicted RBP18.43■□□□□ 0.54
GGA1-219ENST00000481613 KDM4FA0A1W2PPD8 638 aa18.43■□□□□ 0.54
GGA1-219ENST00000481613 FAM69CQ0P6D2 419 aa18.4■□□□□ 0.54
GGA1-219ENST00000481613 TOP2BQ02880 1626 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 229.8 ms