RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 NISCHQ9Y2I1 1504 aa34.42■■■■□ 3.1
SNF8-212ENST00000514089 CCDC180Q9P1Z9 1646 aa30.32■■■□□ 2.44
SNF8-212ENST00000514089 ABCC9O60706 1549 aa29.83■■■□□ 2.37
SNF8-212ENST00000514089 DCAF8L2P0C7V8 631 aa29.17■■■□□ 2.26
SNF8-212ENST00000514089 RB1CC1Q8TDY2 1594 aa28.65■■■□□ 2.18
SNF8-212ENST00000514089 ZCCHC6Q5VYS8 1495 aaKnown RBP28.65■■■□□ 2.18
SNF8-212ENST00000514089 NACADO15069 1562 aa28.64■■■□□ 2.18
SNF8-212ENST00000514089 MYO15BQ96JP2 1530 aa28.46■■■□□ 2.15
SNF8-212ENST00000514089 DCAF1Q9Y4B6 1507 aa28.4■■■□□ 2.14
SNF8-212ENST00000514089 PABPN1Q86U42 306 aaKnown RBP eCLIP28.06■■■□□ 2.085e-8■■■□□ 16.1
SNF8-212ENST00000514089 SCRIBQ14160 1630 aa27.86■■■□□ 2.05
SNF8-212ENST00000514089 UNC13AQ9UPW8 1703 aa27.67■■■□□ 2.02
SNF8-212ENST00000514089 BICRAQ9NZM4 1560 aa27.64■■■□□ 2.01
SNF8-212ENST00000514089 SHROOM4Q9ULL8 1493 aa27.55■■■□□ 2
SNF8-212ENST00000514089 DNAJC5BQ9UF47 199 aa27.26■■□□□ 1.95
SNF8-212ENST00000514089 EIF4G1Q04637 1599 aaKnown RBP27■■□□□ 1.91
SNF8-212ENST00000514089 CC2D2AQ9P2K1 1620 aa26.84■■□□□ 1.89
SNF8-212ENST00000514089 CECR2Q9BXF3 1484 aa26.83■■□□□ 1.89
SNF8-212ENST00000514089 BAZ1AQ9NRL2 1556 aaPredicted RBP26.67■■□□□ 1.86
SNF8-212ENST00000514089 SMARCA4P51532 1647 aa26.59■■□□□ 1.85
SNF8-212ENST00000514089 ATAD2BQ9ULI0 1458 aa26.53■■□□□ 1.84
SNF8-212ENST00000514089 MROH2BQ7Z745 1585 aa26.53■■□□□ 1.84
SNF8-212ENST00000514089 NCAPD3P42695 1498 aa26.49■■□□□ 1.83
SNF8-212ENST00000514089 SMARCA2P51531 1590 aa26.47■■□□□ 1.83
SNF8-212ENST00000514089 RSF1Q96T23 1441 aaPredicted RBP26.36■■□□□ 1.81
SNF8-212ENST00000514089 BAZ1BQ9UIG0 1483 aaKnown RBP26.36■■□□□ 1.81
SNF8-212ENST00000514089 PEG3Q9GZU2 1588 aa26.27■■□□□ 1.8
SNF8-212ENST00000514089 HMGXB3Q12766 1538 aa26.25■■□□□ 1.79
SNF8-212ENST00000514089 WIZO95785 1651 aa26.18■■□□□ 1.78
SNF8-212ENST00000514089 SUPT5HO00267 1087 aaKnown RBP26.12■■□□□ 1.77
SNF8-212ENST00000514089 TOP2AP11388 1531 aaKnown RBP25.95■■□□□ 1.74
SNF8-212ENST00000514089 CADPSQ9ULU8 1353 aa25.82■■□□□ 1.72
SNF8-212ENST00000514089 NESP48681 1621 aa25.79■■□□□ 1.72
SNF8-212ENST00000514089 ERCC6Q03468 1493 aa25.78■■□□□ 1.72
SNF8-212ENST00000514089 CCDC88BA6NC98 1476 aa25.74■■□□□ 1.71
SNF8-212ENST00000514089 PDS5BQ9NTI5 1447 aa25.7■■□□□ 1.7
SNF8-212ENST00000514089 LAMC3Q9Y6N6 1575 aa25.69■■□□□ 1.7
SNF8-212ENST00000514089 CFTRP13569 1480 aa25.6■■□□□ 1.69
SNF8-212ENST00000514089 FANCD2Q9BXW9 1451 aa25.47■■□□□ 1.67
SNF8-212ENST00000514089 CEP164Q9UPV0 1460 aa25.41■■□□□ 1.66
SNF8-212ENST00000514089 MRC2Q9UBG0 1479 aa25.32■■□□□ 1.64
SNF8-212ENST00000514089 CUX2O14529 1486 aa25.29■■□□□ 1.64
SNF8-212ENST00000514089 KIF21AQ7Z4S6 1674 aa25.29■■□□□ 1.64
SNF8-212ENST00000514089 THOC2Q8NI27 1593 aaKnown RBP25.18■■□□□ 1.62
SNF8-212ENST00000514089 WDR62O43379 1518 aa25.12■■□□□ 1.61
SNF8-212ENST00000514089 URB2Q14146 1524 aaKnown RBP25.12■■□□□ 1.61
SNF8-212ENST00000514089 ABCC8Q09428 1581 aa25.1■■□□□ 1.61
SNF8-212ENST00000514089 PRDM2Q13029 1718 aa25.07■■□□□ 1.6
SNF8-212ENST00000514089 TOPBP1Q92547 1522 aa25.02■■□□□ 1.6
SNF8-212ENST00000514089 DNMBPQ6XZF7 1577 aa24.96■■□□□ 1.59
SNF8-212ENST00000514089 WRNQ14191 1432 aaPredicted RBP eCLIP24.89■■□□□ 1.58
SNF8-212ENST00000514089 IFT140Q96RY7 1462 aa24.89■■□□□ 1.57
SNF8-212ENST00000514089 SOGA1O94964 1423 aa24.87■■□□□ 1.57
SNF8-212ENST00000514089 CUX1P39880 1505 aa24.86■■□□□ 1.57
SNF8-212ENST00000514089 POLA1P09884 1462 aaPredicted RBP24.83■■□□□ 1.56
SNF8-212ENST00000514089 FGD5Q6ZNL6 1462 aa24.81■■□□□ 1.56
SNF8-212ENST00000514089 RAD54L2Q9Y4B4 1467 aa24.78■■□□□ 1.56
SNF8-212ENST00000514089 TDRD9Q8NDG6 1382 aaKnown RBP24.73■■□□□ 1.55
SNF8-212ENST00000514089 ZNF608Q9ULD9 1512 aaPredicted RBP24.71■■□□□ 1.55
SNF8-212ENST00000514089 AQRO60306 1485 aaKnown RBP eCLIP24.69■■□□□ 1.543e-6■■■□□ 17.8
SNF8-212ENST00000514089 TRIM41Q8WV44 630 aa24.66■■□□□ 1.54
SNF8-212ENST00000514089 TOP2BQ02880 1626 aa24.65■■□□□ 1.54
SNF8-212ENST00000514089 SYNJ1O43426 1573 aa24.65■■□□□ 1.54
SNF8-212ENST00000514089 TARBP1Q13395 1621 aaKnown RBP24.61■■□□□ 1.53
SNF8-212ENST00000514089 FBLN2P98095 1184 aa24.61■■□□□ 1.53
SNF8-212ENST00000514089 BIVM-ERCC5R4GMW8 1640 aa24.56■■□□□ 1.52
SNF8-212ENST00000514089 ABCA10Q8WWZ4 1543 aa24.55■■□□□ 1.52
SNF8-212ENST00000514089 OSCARQ8IYS5 282 aa24.53■■□□□ 1.52
SNF8-212ENST00000514089 GAPVD1Q14C86 1478 aa24.52■■□□□ 1.52
SNF8-212ENST00000514089 CHMP7Q8WUX9 453 aaPredicted RBP24.51■■□□□ 1.51
SNF8-212ENST00000514089 EIF4G3O43432 1585 aaKnown RBP24.5■■□□□ 1.51
SNF8-212ENST00000514089 DNAJC5Q9H3Z4 198 aa24.49■■□□□ 1.51
SNF8-212ENST00000514089 GRIN2BQ13224 1484 aa24.49■■□□□ 1.51
SNF8-212ENST00000514089 WDR97A6NE52 1622 aa24.43■■□□□ 1.5
SNF8-212ENST00000514089 KIF27Q86VH2 1401 aa24.42■■□□□ 1.5
SNF8-212ENST00000514089 SNAPC4Q5SXM2 1469 aa24.41■■□□□ 1.5
SNF8-212ENST00000514089 MAGI1Q96QZ7 1491 aaPredicted RBP24.35■■□□□ 1.49
SNF8-212ENST00000514089 CHIC1Q5VXU3 224 aa24.35■■□□□ 1.49
SNF8-212ENST00000514089 ABCA5Q8WWZ7 1642 aa24.3■■□□□ 1.48
SNF8-212ENST00000514089 SYNJ2O15056 1496 aa24.28■■□□□ 1.48
SNF8-212ENST00000514089 IGF1RP08069 1367 aa24.28■■□□□ 1.48
SNF8-212ENST00000514089 FHAD1B1AJZ9 1412 aa24.26■■□□□ 1.47
SNF8-212ENST00000514089 ERICH3Q5RHP9 1530 aa24.25■■□□□ 1.47
SNF8-212ENST00000514089 PBRM1Q86U86 1689 aa24.19■■□□□ 1.46
SNF8-212ENST00000514089 CARMIL1Q5VZK9 1371 aa24.17■■□□□ 1.46
SNF8-212ENST00000514089 FAM9AQ8IZU1 332 aaPredicted RBP24.17■■□□□ 1.46
SNF8-212ENST00000514089 RUSC2Q8N2Y8 1516 aa24.14■■□□□ 1.45
SNF8-212ENST00000514089 GRIN2AQ12879 1464 aa24.13■■□□□ 1.45
SNF8-212ENST00000514089 CSRNP3Q8WYN3 585 aa24.11■■□□□ 1.45
SNF8-212ENST00000514089 ADAMTS12P58397 1594 aa24.11■■□□□ 1.45
SNF8-212ENST00000514089 CHD1O14646 1710 aa24.09■■□□□ 1.45
SNF8-212ENST00000514089 EEA1Q15075 1411 aa24.01■■□□□ 1.43
SNF8-212ENST00000514089 NUP160Q12769 1436 aa23.99■■□□□ 1.43
SNF8-212ENST00000514089 CUL7Q14999 1698 aa23.99■■□□□ 1.43
SNF8-212ENST00000514089 RAPGEF2Q9Y4G8 1499 aa23.98■■□□□ 1.43
SNF8-212ENST00000514089 JPH4Q96JJ6 628 aa23.97■■□□□ 1.43
SNF8-212ENST00000514089 CYB5RLQ6IPT4 315 aa23.93■■□□□ 1.42
SNF8-212ENST00000514089 CLASP1Q7Z460 1538 aa23.91■■□□□ 1.42
SNF8-212ENST00000514089 CEP170Q5SW79 1584 aa23.91■■□□□ 1.42
SNF8-212ENST00000514089 EHMT2Q96KQ7 1210 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms