RNA–Protein interactions for RNA: ENST00000586830.1

TRMT1-207, Transcript of tRNA methyltransferase 1, humanhuman

TSL 3

Gene TRMT1, Length 354 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-207ENST00000586830 NISCHQ9Y2I1 1504 aa31.44■■■□□ 2.62
TRMT1-207ENST00000586830 ABCC9O60706 1549 aa28.44■■■□□ 2.14
TRMT1-207ENST00000586830 CCDC180Q9P1Z9 1646 aa28.33■■■□□ 2.13
TRMT1-207ENST00000586830 RB1CC1Q8TDY2 1594 aa26.92■■□□□ 1.9
TRMT1-207ENST00000586830 DNAJC5BQ9UF47 199 aa26.83■■□□□ 1.89
TRMT1-207ENST00000586830 NACADO15069 1562 aa26.68■■□□□ 1.86
TRMT1-207ENST00000586830 UNC13AQ9UPW8 1703 aa26.63■■□□□ 1.85
TRMT1-207ENST00000586830 BICRAQ9NZM4 1560 aa26.38■■□□□ 1.81
TRMT1-207ENST00000586830 PABPN1Q86U42 306 aaKnown RBP eCLIP26.36■■□□□ 1.813e-7■■■□□ 16
TRMT1-207ENST00000586830 DCAF8L2P0C7V8 631 aa26.32■■□□□ 1.8
TRMT1-207ENST00000586830 MYO15BQ96JP2 1530 aa26.24■■□□□ 1.79
TRMT1-207ENST00000586830 ZCCHC6Q5VYS8 1495 aaKnown RBP26.11■■□□□ 1.77
TRMT1-207ENST00000586830 DCAF1Q9Y4B6 1507 aa25.9■■□□□ 1.74
TRMT1-207ENST00000586830 SCRIBQ14160 1630 aa25.88■■□□□ 1.73
TRMT1-207ENST00000586830 CC2D2AQ9P2K1 1620 aa25.72■■□□□ 1.71
TRMT1-207ENST00000586830 SHROOM4Q9ULL8 1493 aa25.71■■□□□ 1.71
TRMT1-207ENST00000586830 EIF4G1Q04637 1599 aaKnown RBP25.61■■□□□ 1.69
TRMT1-207ENST00000586830 CECR2Q9BXF3 1484 aa25.56■■□□□ 1.68
TRMT1-207ENST00000586830 SMARCA4P51532 1647 aa24.64■■□□□ 1.53
TRMT1-207ENST00000586830 NCAPD3P42695 1498 aa24.63■■□□□ 1.53
TRMT1-207ENST00000586830 ATAD2BQ9ULI0 1458 aa24.6■■□□□ 1.53
TRMT1-207ENST00000586830 HMGXB3Q12766 1538 aa24.52■■□□□ 1.52
TRMT1-207ENST00000586830 DNAJC5Q9H3Z4 198 aa24.5■■□□□ 1.51
TRMT1-207ENST00000586830 NESP48681 1621 aa24.49■■□□□ 1.51
TRMT1-207ENST00000586830 SMARCA2P51531 1590 aa24.46■■□□□ 1.51
TRMT1-207ENST00000586830 CUX2O14529 1486 aa24.44■■□□□ 1.5
TRMT1-207ENST00000586830 ERCC6Q03468 1493 aa24.41■■□□□ 1.5
TRMT1-207ENST00000586830 BAZ1AQ9NRL2 1556 aaPredicted RBP24.36■■□□□ 1.49
TRMT1-207ENST00000586830 PEG3Q9GZU2 1588 aa24.35■■□□□ 1.49
TRMT1-207ENST00000586830 MROH2BQ7Z745 1585 aa24.33■■□□□ 1.48
TRMT1-207ENST00000586830 THOC2Q8NI27 1593 aaKnown RBP24.32■■□□□ 1.48
TRMT1-207ENST00000586830 BAZ1BQ9UIG0 1483 aaKnown RBP24.31■■□□□ 1.48
TRMT1-207ENST00000586830 KIF21AQ7Z4S6 1674 aa24.22■■□□□ 1.47
TRMT1-207ENST00000586830 LAMC3Q9Y6N6 1575 aa24.13■■□□□ 1.45
TRMT1-207ENST00000586830 WIZO95785 1651 aa24.07■■□□□ 1.44
TRMT1-207ENST00000586830 PDS5BQ9NTI5 1447 aa23.84■■□□□ 1.41
TRMT1-207ENST00000586830 WDR62O43379 1518 aa23.83■■□□□ 1.41
TRMT1-207ENST00000586830 CADPSQ9ULU8 1353 aa23.82■■□□□ 1.4
TRMT1-207ENST00000586830 MRC2Q9UBG0 1479 aa23.81■■□□□ 1.4
TRMT1-207ENST00000586830 RSF1Q96T23 1441 aaPredicted RBP23.67■■□□□ 1.38
TRMT1-207ENST00000586830 TOP2AP11388 1531 aaKnown RBP23.66■■□□□ 1.38
TRMT1-207ENST00000586830 CEP164Q9UPV0 1460 aa23.66■■□□□ 1.38
TRMT1-207ENST00000586830 FANCD2Q9BXW9 1451 aa23.64■■□□□ 1.38
TRMT1-207ENST00000586830 CFTRP13569 1480 aa23.61■■□□□ 1.37
TRMT1-207ENST00000586830 URB2Q14146 1524 aaKnown RBP23.58■■□□□ 1.36
TRMT1-207ENST00000586830 PRDM2Q13029 1718 aa23.54■■□□□ 1.36
TRMT1-207ENST00000586830 TRIM41Q8WV44 630 aa23.39■■□□□ 1.33
TRMT1-207ENST00000586830 CCDC88BA6NC98 1476 aa23.36■■□□□ 1.33
TRMT1-207ENST00000586830 ZNF608Q9ULD9 1512 aaPredicted RBP23.32■■□□□ 1.32
TRMT1-207ENST00000586830 TOPBP1Q92547 1522 aa23.23■■□□□ 1.31
TRMT1-207ENST00000586830 EIF4G3O43432 1585 aaKnown RBP23.21■■□□□ 1.31
TRMT1-207ENST00000586830 RIMBP3CA6NJZ7 1639 aa23.2■■□□□ 1.3
TRMT1-207ENST00000586830 RIMBP3BA6NNM3 1639 aa23.2■■□□□ 1.3
TRMT1-207ENST00000586830 RIMBP3Q9UFD9 1639 aa23.2■■□□□ 1.3
TRMT1-207ENST00000586830 IFT140Q96RY7 1462 aa23.16■■□□□ 1.3
TRMT1-207ENST00000586830 DNMBPQ6XZF7 1577 aa23.14■■□□□ 1.29
TRMT1-207ENST00000586830 TARBP1Q13395 1621 aaKnown RBP23.13■■□□□ 1.29
TRMT1-207ENST00000586830 OSCARQ8IYS5 282 aa23.11■■□□□ 1.29
TRMT1-207ENST00000586830 CHD1O14646 1710 aa23.11■■□□□ 1.29
TRMT1-207ENST00000586830 ARHGEF11O15085 1522 aa23.04■■□□□ 1.28
TRMT1-207ENST00000586830 POLA1P09884 1462 aaPredicted RBP22.99■■□□□ 1.27
TRMT1-207ENST00000586830 AQRO60306 1485 aaKnown RBP eCLIP22.98■■□□□ 1.272e-7■■■□□ 15
TRMT1-207ENST00000586830 RAD54L2Q9Y4B4 1467 aa22.94■■□□□ 1.26
TRMT1-207ENST00000586830 ABCC8Q09428 1581 aa22.93■■□□□ 1.26
TRMT1-207ENST00000586830 CUX1P39880 1505 aa22.87■■□□□ 1.25
TRMT1-207ENST00000586830 ARAP1Q96P48 1450 aa22.86■■□□□ 1.25
TRMT1-207ENST00000586830 WDR97A6NE52 1622 aa22.86■■□□□ 1.25
TRMT1-207ENST00000586830 FGD5Q6ZNL6 1462 aa22.84■■□□□ 1.25
TRMT1-207ENST00000586830 SNAPC4Q5SXM2 1469 aa22.79■■□□□ 1.24
TRMT1-207ENST00000586830 TDRD9Q8NDG6 1382 aaKnown RBP22.78■■□□□ 1.24
TRMT1-207ENST00000586830 CLASP1Q7Z460 1538 aa22.78■■□□□ 1.24
TRMT1-207ENST00000586830 SOGA1O94964 1423 aa22.74■■□□□ 1.23
TRMT1-207ENST00000586830 PBRM1Q86U86 1689 aa22.72■■□□□ 1.23
TRMT1-207ENST00000586830 CYB5RLQ6IPT4 315 aa22.66■■□□□ 1.22
TRMT1-207ENST00000586830 FBLN2P98095 1184 aa22.65■■□□□ 1.22
TRMT1-207ENST00000586830 ABCA5Q8WWZ7 1642 aa22.64■■□□□ 1.22
TRMT1-207ENST00000586830 MAGI1Q96QZ7 1491 aaPredicted RBP22.61■■□□□ 1.21
TRMT1-207ENST00000586830 GRIN2BQ13224 1484 aa22.6■■□□□ 1.21
TRMT1-207ENST00000586830 SYNJ1O43426 1573 aa22.59■■□□□ 1.21
TRMT1-207ENST00000586830 SYNJ2O15056 1496 aa22.56■■□□□ 1.2
TRMT1-207ENST00000586830 ABCA10Q8WWZ4 1543 aa22.52■■□□□ 1.2
TRMT1-207ENST00000586830 ERCC6L2Q5T890 1561 aa22.52■■□□□ 1.2
TRMT1-207ENST00000586830 GAPVD1Q14C86 1478 aa22.51■■□□□ 1.19
TRMT1-207ENST00000586830 ADAMTS12P58397 1594 aa22.47■■□□□ 1.19
TRMT1-207ENST00000586830 BIVM-ERCC5R4GMW8 1640 aa22.47■■□□□ 1.19
TRMT1-207ENST00000586830 CEP170Q5SW79 1584 aa22.44■■□□□ 1.18
TRMT1-207ENST00000586830 CHMP7Q8WUX9 453 aaPredicted RBP22.42■■□□□ 1.18
TRMT1-207ENST00000586830 TOP2BQ02880 1626 aa22.4■■□□□ 1.18
TRMT1-207ENST00000586830 TRHP20396 242 aaPredicted RBP22.38■■□□□ 1.17
TRMT1-207ENST00000586830 GRIN2AQ12879 1464 aa22.37■■□□□ 1.17
TRMT1-207ENST00000586830 SUPT5HO00267 1087 aaKnown RBP22.37■■□□□ 1.17
TRMT1-207ENST00000586830 SHROOM2Q13796 1616 aa22.34■■□□□ 1.17
TRMT1-207ENST00000586830 NUP160Q12769 1436 aa22.31■■□□□ 1.16
TRMT1-207ENST00000586830 WRNQ14191 1432 aaPredicted RBP eCLIP22.27■■□□□ 1.16
TRMT1-207ENST00000586830 ERICH3Q5RHP9 1530 aa22.2■■□□□ 1.14
TRMT1-207ENST00000586830 RUSC2Q8N2Y8 1516 aa22.18■■□□□ 1.14
TRMT1-207ENST00000586830 FHAD1B1AJZ9 1412 aa22.18■■□□□ 1.14
TRMT1-207ENST00000586830 KIF13AQ9H1H9 1805 aa22.16■■□□□ 1.14
TRMT1-207ENST00000586830 PRG4Q92954 1404 aaPredicted RBP22.03■■□□□ 1.12
TRMT1-207ENST00000586830 ADCY10Q96PN6 1610 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms