RNA–Protein interactions for RNA: ENST00000450364.3

SMARCD2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-204ENST00000450364 NISCHQ9Y2I1 1504 aa34.15■■■■□ 3.06
SMARCD2-204ENST00000450364 CCDC180Q9P1Z9 1646 aa30.48■■■□□ 2.47
SMARCD2-204ENST00000450364 ABCC9O60706 1549 aa30.17■■■□□ 2.42
SMARCD2-204ENST00000450364 RB1CC1Q8TDY2 1594 aa28.81■■■□□ 2.2
SMARCD2-204ENST00000450364 NACADO15069 1562 aa28.71■■■□□ 2.19
SMARCD2-204ENST00000450364 DCAF8L2P0C7V8 631 aa28.53■■■□□ 2.16
SMARCD2-204ENST00000450364 MYO15BQ96JP2 1530 aa28.44■■■□□ 2.14
SMARCD2-204ENST00000450364 ZCCHC6Q5VYS8 1495 aaKnown RBP28.4■■■□□ 2.14
SMARCD2-204ENST00000450364 UNC13AQ9UPW8 1703 aa28.31■■■□□ 2.12
SMARCD2-204ENST00000450364 DCAF1Q9Y4B6 1507 aa28.22■■■□□ 2.11
SMARCD2-204ENST00000450364 PABPN1Q86U42 306 aaKnown RBP eCLIP28.13■■■□□ 2.095e-8■■■□□ 16.1
SMARCD2-204ENST00000450364 BICRAQ9NZM4 1560 aa28.11■■■□□ 2.09
SMARCD2-204ENST00000450364 DNAJC5BQ9UF47 199 aa28.08■■■□□ 2.09
SMARCD2-204ENST00000450364 SCRIBQ14160 1630 aa27.83■■■□□ 2.05
SMARCD2-204ENST00000450364 SHROOM4Q9ULL8 1493 aa27.6■■■□□ 2.01
SMARCD2-204ENST00000450364 EIF4G1Q04637 1599 aaKnown RBP27.31■■□□□ 1.96
SMARCD2-204ENST00000450364 CC2D2AQ9P2K1 1620 aa27.29■■□□□ 1.96
SMARCD2-204ENST00000450364 CECR2Q9BXF3 1484 aa27.11■■□□□ 1.93
SMARCD2-204ENST00000450364 SMARCA4P51532 1647 aa26.58■■□□□ 1.85
SMARCD2-204ENST00000450364 NCAPD3P42695 1498 aa26.52■■□□□ 1.84
SMARCD2-204ENST00000450364 ATAD2BQ9ULI0 1458 aa26.51■■□□□ 1.83
SMARCD2-204ENST00000450364 BAZ1AQ9NRL2 1556 aaPredicted RBP26.44■■□□□ 1.82
SMARCD2-204ENST00000450364 SMARCA2P51531 1590 aa26.39■■□□□ 1.82
SMARCD2-204ENST00000450364 MROH2BQ7Z745 1585 aa26.37■■□□□ 1.81
SMARCD2-204ENST00000450364 HMGXB3Q12766 1538 aa26.36■■□□□ 1.81
SMARCD2-204ENST00000450364 PEG3Q9GZU2 1588 aa26.33■■□□□ 1.81
SMARCD2-204ENST00000450364 BAZ1BQ9UIG0 1483 aaKnown RBP26.22■■□□□ 1.79
SMARCD2-204ENST00000450364 NESP48681 1621 aa26.06■■□□□ 1.76
SMARCD2-204ENST00000450364 WIZO95785 1651 aa26.06■■□□□ 1.76
SMARCD2-204ENST00000450364 ERCC6Q03468 1493 aa25.92■■□□□ 1.74
SMARCD2-204ENST00000450364 RSF1Q96T23 1441 aaPredicted RBP25.92■■□□□ 1.74
SMARCD2-204ENST00000450364 LAMC3Q9Y6N6 1575 aa25.85■■□□□ 1.73
SMARCD2-204ENST00000450364 CUX2O14529 1486 aa25.81■■□□□ 1.72
SMARCD2-204ENST00000450364 THOC2Q8NI27 1593 aaKnown RBP25.74■■□□□ 1.71
SMARCD2-204ENST00000450364 KIF21AQ7Z4S6 1674 aa25.74■■□□□ 1.71
SMARCD2-204ENST00000450364 TOP2AP11388 1531 aaKnown RBP25.72■■□□□ 1.71
SMARCD2-204ENST00000450364 CADPSQ9ULU8 1353 aa25.7■■□□□ 1.71
SMARCD2-204ENST00000450364 PDS5BQ9NTI5 1447 aa25.63■■□□□ 1.69
SMARCD2-204ENST00000450364 CFTRP13569 1480 aa25.53■■□□□ 1.68
SMARCD2-204ENST00000450364 MRC2Q9UBG0 1479 aa25.46■■□□□ 1.67
SMARCD2-204ENST00000450364 CCDC88BA6NC98 1476 aa25.43■■□□□ 1.66
SMARCD2-204ENST00000450364 FANCD2Q9BXW9 1451 aa25.43■■□□□ 1.66
SMARCD2-204ENST00000450364 WDR62O43379 1518 aa25.42■■□□□ 1.66
SMARCD2-204ENST00000450364 DNAJC5Q9H3Z4 198 aa25.41■■□□□ 1.66
SMARCD2-204ENST00000450364 CEP164Q9UPV0 1460 aa25.4■■□□□ 1.66
SMARCD2-204ENST00000450364 PRDM2Q13029 1718 aa25.31■■□□□ 1.64
SMARCD2-204ENST00000450364 URB2Q14146 1524 aaKnown RBP25.27■■□□□ 1.64
SMARCD2-204ENST00000450364 TOPBP1Q92547 1522 aa25.02■■□□□ 1.6
SMARCD2-204ENST00000450364 DNMBPQ6XZF7 1577 aa24.93■■□□□ 1.58
SMARCD2-204ENST00000450364 SUPT5HO00267 1087 aaKnown RBP24.91■■□□□ 1.58
SMARCD2-204ENST00000450364 ZNF608Q9ULD9 1512 aaPredicted RBP24.9■■□□□ 1.58
SMARCD2-204ENST00000450364 IFT140Q96RY7 1462 aa24.89■■□□□ 1.57
SMARCD2-204ENST00000450364 ABCC8Q09428 1581 aa24.88■■□□□ 1.57
SMARCD2-204ENST00000450364 TARBP1Q13395 1621 aaKnown RBP24.82■■□□□ 1.56
SMARCD2-204ENST00000450364 POLA1P09884 1462 aaPredicted RBP24.78■■□□□ 1.56
SMARCD2-204ENST00000450364 EIF4G3O43432 1585 aaKnown RBP24.76■■□□□ 1.55
SMARCD2-204ENST00000450364 CUX1P39880 1505 aa24.75■■□□□ 1.55
SMARCD2-204ENST00000450364 RAD54L2Q9Y4B4 1467 aa24.7■■□□□ 1.55
SMARCD2-204ENST00000450364 AQRO60306 1485 aaKnown RBP eCLIP24.68■■□□□ 1.541e-6■■■□□ 19
SMARCD2-204ENST00000450364 FGD5Q6ZNL6 1462 aa24.67■■□□□ 1.54
SMARCD2-204ENST00000450364 OSCARQ8IYS5 282 aa24.62■■□□□ 1.53
SMARCD2-204ENST00000450364 SOGA1O94964 1423 aa24.61■■□□□ 1.53
SMARCD2-204ENST00000450364 TDRD9Q8NDG6 1382 aaKnown RBP24.55■■□□□ 1.52
SMARCD2-204ENST00000450364 WDR97A6NE52 1622 aa24.55■■□□□ 1.52
SMARCD2-204ENST00000450364 CHD1O14646 1710 aa24.52■■□□□ 1.52
SMARCD2-204ENST00000450364 SYNJ1O43426 1573 aa24.44■■□□□ 1.5
SMARCD2-204ENST00000450364 SNAPC4Q5SXM2 1469 aa24.43■■□□□ 1.5
SMARCD2-204ENST00000450364 BIVM-ERCC5R4GMW8 1640 aa24.43■■□□□ 1.5
SMARCD2-204ENST00000450364 ABCA10Q8WWZ4 1543 aa24.4■■□□□ 1.5
SMARCD2-204ENST00000450364 RIMBP3CA6NJZ7 1639 aa24.4■■□□□ 1.5
SMARCD2-204ENST00000450364 RIMBP3BA6NNM3 1639 aa24.4■■□□□ 1.5
SMARCD2-204ENST00000450364 TOP2BQ02880 1626 aa24.4■■□□□ 1.5
SMARCD2-204ENST00000450364 RIMBP3Q9UFD9 1639 aa24.4■■□□□ 1.5
SMARCD2-204ENST00000450364 TRIM41Q8WV44 630 aa24.4■■□□□ 1.5
SMARCD2-204ENST00000450364 ABCA5Q8WWZ7 1642 aa24.38■■□□□ 1.49
SMARCD2-204ENST00000450364 WRNQ14191 1432 aaPredicted RBP eCLIP24.37■■□□□ 1.49
SMARCD2-204ENST00000450364 GRIN2BQ13224 1484 aa24.37■■□□□ 1.49
SMARCD2-204ENST00000450364 PBRM1Q86U86 1689 aa24.37■■□□□ 1.49
SMARCD2-204ENST00000450364 GAPVD1Q14C86 1478 aa24.34■■□□□ 1.49
SMARCD2-204ENST00000450364 MAGI1Q96QZ7 1491 aaPredicted RBP24.33■■□□□ 1.49
SMARCD2-204ENST00000450364 ARHGEF11O15085 1522 aa24.33■■□□□ 1.49
SMARCD2-204ENST00000450364 FBLN2P98095 1184 aa24.32■■□□□ 1.48
SMARCD2-204ENST00000450364 SYNJ2O15056 1496 aa24.26■■□□□ 1.47
SMARCD2-204ENST00000450364 CLASP1Q7Z460 1538 aa24.25■■□□□ 1.47
SMARCD2-204ENST00000450364 CHMP7Q8WUX9 453 aaPredicted RBP24.2■■□□□ 1.46
SMARCD2-204ENST00000450364 ADAMTS12P58397 1594 aa24.16■■□□□ 1.46
SMARCD2-204ENST00000450364 ARAP1Q96P48 1450 aa24.15■■□□□ 1.46
SMARCD2-204ENST00000450364 GRIN2AQ12879 1464 aa24.08■■□□□ 1.45
SMARCD2-204ENST00000450364 ERICH3Q5RHP9 1530 aa24.08■■□□□ 1.45
SMARCD2-204ENST00000450364 CYB5RLQ6IPT4 315 aa24.05■■□□□ 1.44
SMARCD2-204ENST00000450364 CEP170Q5SW79 1584 aa24.04■■□□□ 1.44
SMARCD2-204ENST00000450364 FHAD1B1AJZ9 1412 aa24.03■■□□□ 1.44
SMARCD2-204ENST00000450364 NUP160Q12769 1436 aa24.01■■□□□ 1.43
SMARCD2-204ENST00000450364 ERCC6L2Q5T890 1561 aa23.95■■□□□ 1.43
SMARCD2-204ENST00000450364 SHROOM2Q13796 1616 aa23.9■■□□□ 1.42
SMARCD2-204ENST00000450364 IGF1RP08069 1367 aa23.88■■□□□ 1.41
SMARCD2-204ENST00000450364 KIF27Q86VH2 1401 aa23.84■■□□□ 1.41
SMARCD2-204ENST00000450364 RUSC2Q8N2Y8 1516 aa23.82■■□□□ 1.4
SMARCD2-204ENST00000450364 CUL7Q14999 1698 aa23.79■■□□□ 1.4
SMARCD2-204ENST00000450364 PRG4Q92954 1404 aaPredicted RBP23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms