Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
PCDHGC3Q9UN70 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
PCDHGC3Q9UN70 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC29.57■■■□□ 2.32
PCDHGC3Q9UN70 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
PCDHGC3Q9UN70 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC29.54■■■□□ 2.32
PCDHGC3Q9UN70 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.51■■■□□ 2.31
PCDHGC3Q9UN70 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC29.51■■■□□ 2.31
PCDHGC3Q9UN70 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC29.51■■■□□ 2.31
PCDHGC3Q9UN70 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC29.5■■■□□ 2.31
PCDHGC3Q9UN70 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
PCDHGC3Q9UN70 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
PCDHGC3Q9UN70 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
PCDHGC3Q9UN70 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
PCDHGC3Q9UN70 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC29.45■■■□□ 2.31
PCDHGC3Q9UN70 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC29.45■■■□□ 2.3
PCDHGC3Q9UN70 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC29.44■■■□□ 2.3
PCDHGC3Q9UN70 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC29.44■■■□□ 2.3
PCDHGC3Q9UN70 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29.43■■■□□ 2.3
PCDHGC3Q9UN70 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
PCDHGC3Q9UN70 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PCDHGC3Q9UN70 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC29.42■■■□□ 2.3
PCDHGC3Q9UN70 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC29.4■■■□□ 2.3
PCDHGC3Q9UN70 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
PCDHGC3Q9UN70 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.38■■■□□ 2.29
PCDHGC3Q9UN70 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC29.36■■■□□ 2.29
PCDHGC3Q9UN70 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
PCDHGC3Q9UN70 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
PCDHGC3Q9UN70 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
PCDHGC3Q9UN70 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PCDHGC3Q9UN70 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PCDHGC3Q9UN70 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
PCDHGC3Q9UN70 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
PCDHGC3Q9UN70 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
PCDHGC3Q9UN70 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
PCDHGC3Q9UN70 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC29.29■■■□□ 2.28
PCDHGC3Q9UN70 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
PCDHGC3Q9UN70 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC29.27■■■□□ 2.28
PCDHGC3Q9UN70 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
PCDHGC3Q9UN70 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.27
PCDHGC3Q9UN70 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
PCDHGC3Q9UN70 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC29.26■■■□□ 2.27
PCDHGC3Q9UN70 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
PCDHGC3Q9UN70 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC29.25■■■□□ 2.27
PCDHGC3Q9UN70 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
PCDHGC3Q9UN70 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC29.24■■■□□ 2.27
PCDHGC3Q9UN70 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC29.24■■■□□ 2.27
PCDHGC3Q9UN70 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
PCDHGC3Q9UN70 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC29.24■■■□□ 2.27
PCDHGC3Q9UN70 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
PCDHGC3Q9UN70 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
PCDHGC3Q9UN70 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC29.22■■■□□ 2.27
PCDHGC3Q9UN70 AC120057.4-201ENST00000624722 1615 ntBASIC29.22■■■□□ 2.27
PCDHGC3Q9UN70 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PCDHGC3Q9UN70 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
PCDHGC3Q9UN70 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC29.21■■■□□ 2.27
PCDHGC3Q9UN70 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
PCDHGC3Q9UN70 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
PCDHGC3Q9UN70 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
PCDHGC3Q9UN70 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
PCDHGC3Q9UN70 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
PCDHGC3Q9UN70 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC29.16■■■□□ 2.26
PCDHGC3Q9UN70 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
PCDHGC3Q9UN70 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.14■■■□□ 2.26
PCDHGC3Q9UN70 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29.13■■■□□ 2.25
PCDHGC3Q9UN70 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
PCDHGC3Q9UN70 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
PCDHGC3Q9UN70 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
PCDHGC3Q9UN70 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
PCDHGC3Q9UN70 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC29.08■■■□□ 2.25
PCDHGC3Q9UN70 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC29.08■■■□□ 2.25
PCDHGC3Q9UN70 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
PCDHGC3Q9UN70 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
PCDHGC3Q9UN70 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
PCDHGC3Q9UN70 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC29.05■■■□□ 2.24
PCDHGC3Q9UN70 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
PCDHGC3Q9UN70 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
PCDHGC3Q9UN70 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC29.03■■■□□ 2.24
PCDHGC3Q9UN70 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
PCDHGC3Q9UN70 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC29.01■■■□□ 2.24
PCDHGC3Q9UN70 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
PCDHGC3Q9UN70 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.97■■■□□ 2.23
PCDHGC3Q9UN70 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC28.96■■■□□ 2.23
PCDHGC3Q9UN70 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.94■■■□□ 2.22
PCDHGC3Q9UN70 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.93■■■□□ 2.22
PCDHGC3Q9UN70 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC28.93■■■□□ 2.22
PCDHGC3Q9UN70 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC28.93■■■□□ 2.22
PCDHGC3Q9UN70 AL133380.1-201ENST00000506013 324 ntBASIC28.92■■■□□ 2.22
PCDHGC3Q9UN70 RARRES2P7-201ENST00000567349 469 ntBASIC28.92■■■□□ 2.22
PCDHGC3Q9UN70 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC28.9■■■□□ 2.22
PCDHGC3Q9UN70 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC28.88■■■□□ 2.21
PCDHGC3Q9UN70 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
PCDHGC3Q9UN70 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC28.88■■■□□ 2.21
PCDHGC3Q9UN70 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
PCDHGC3Q9UN70 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC28.87■■■□□ 2.21
PCDHGC3Q9UN70 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
PCDHGC3Q9UN70 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
PCDHGC3Q9UN70 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
PCDHGC3Q9UN70 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
PCDHGC3Q9UN70 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
PCDHGC3Q9UN70 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28.84■■■□□ 2.21
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms