Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.16■■■■□ 3.38
PCDHGC3Q9UN70 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
PCDHGC3Q9UN70 AL356512.1-201ENST00000607453 1739 ntBASIC35.34■■■■□ 3.25
PCDHGC3Q9UN70 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC35.25■■■■□ 3.23
PCDHGC3Q9UN70 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
PCDHGC3Q9UN70 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.98■■■■□ 3.19
PCDHGC3Q9UN70 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
PCDHGC3Q9UN70 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.64■■■■□ 3.14
PCDHGC3Q9UN70 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC34.61■■■■□ 3.13
PCDHGC3Q9UN70 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.48■■■■□ 3.11
PCDHGC3Q9UN70 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.34■■■■□ 3.09
PCDHGC3Q9UN70 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC34.3■■■■□ 3.08
PCDHGC3Q9UN70 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
PCDHGC3Q9UN70 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.82■■■■□ 3
PCDHGC3Q9UN70 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC33.74■■■□□ 2.99
PCDHGC3Q9UN70 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.41■■■□□ 2.94
PCDHGC3Q9UN70 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC33.39■■■□□ 2.94
PCDHGC3Q9UN70 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC33.37■■■□□ 2.93
PCDHGC3Q9UN70 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.23■■■□□ 2.91
PCDHGC3Q9UN70 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC33.19■■■□□ 2.9
PCDHGC3Q9UN70 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.17■■■□□ 2.9
PCDHGC3Q9UN70 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.16■■■□□ 2.9
PCDHGC3Q9UN70 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.15■■■□□ 2.9
PCDHGC3Q9UN70 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC33.1■■■□□ 2.89
PCDHGC3Q9UN70 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC33.06■■■□□ 2.88
PCDHGC3Q9UN70 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.9■■■□□ 2.86
PCDHGC3Q9UN70 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
PCDHGC3Q9UN70 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.85■■■□□ 2.85
PCDHGC3Q9UN70 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
PCDHGC3Q9UN70 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
PCDHGC3Q9UN70 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.65■■■□□ 2.82
PCDHGC3Q9UN70 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.48■■■□□ 2.79
PCDHGC3Q9UN70 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
PCDHGC3Q9UN70 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.41■■■□□ 2.78
PCDHGC3Q9UN70 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
PCDHGC3Q9UN70 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
PCDHGC3Q9UN70 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
PCDHGC3Q9UN70 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.3■■■□□ 2.76
PCDHGC3Q9UN70 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
PCDHGC3Q9UN70 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
PCDHGC3Q9UN70 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
PCDHGC3Q9UN70 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
PCDHGC3Q9UN70 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
PCDHGC3Q9UN70 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
PCDHGC3Q9UN70 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
PCDHGC3Q9UN70 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.97■■■□□ 2.71
PCDHGC3Q9UN70 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
PCDHGC3Q9UN70 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.92■■■□□ 2.7
PCDHGC3Q9UN70 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.92■■■□□ 2.7
PCDHGC3Q9UN70 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
PCDHGC3Q9UN70 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.9■■■□□ 2.7
PCDHGC3Q9UN70 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.89■■■□□ 2.7
PCDHGC3Q9UN70 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.85■■■□□ 2.69
PCDHGC3Q9UN70 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.72■■■□□ 2.67
PCDHGC3Q9UN70 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
PCDHGC3Q9UN70 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
PCDHGC3Q9UN70 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.61■■■□□ 2.65
PCDHGC3Q9UN70 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
PCDHGC3Q9UN70 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PCDHGC3Q9UN70 AC015813.7-201ENST00000623294 581 ntBASIC31.58■■■□□ 2.65
PCDHGC3Q9UN70 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.52■■■□□ 2.64
PCDHGC3Q9UN70 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
PCDHGC3Q9UN70 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PCDHGC3Q9UN70 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.48■■■□□ 2.63
PCDHGC3Q9UN70 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
PCDHGC3Q9UN70 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.37■■■□□ 2.61
PCDHGC3Q9UN70 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
PCDHGC3Q9UN70 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PCDHGC3Q9UN70 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
PCDHGC3Q9UN70 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
PCDHGC3Q9UN70 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.31■■■□□ 2.6
PCDHGC3Q9UN70 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
PCDHGC3Q9UN70 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PCDHGC3Q9UN70 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.18■■■□□ 2.58
PCDHGC3Q9UN70 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PCDHGC3Q9UN70 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
PCDHGC3Q9UN70 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.1■■■□□ 2.57
PCDHGC3Q9UN70 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
PCDHGC3Q9UN70 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
PCDHGC3Q9UN70 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
PCDHGC3Q9UN70 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
PCDHGC3Q9UN70 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31■■■□□ 2.55
PCDHGC3Q9UN70 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
PCDHGC3Q9UN70 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
PCDHGC3Q9UN70 AC006077.2-201ENST00000623591 457 ntBASIC30.93■■■□□ 2.54
PCDHGC3Q9UN70 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
PCDHGC3Q9UN70 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
PCDHGC3Q9UN70 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
PCDHGC3Q9UN70 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
PCDHGC3Q9UN70 AC145285.7-201ENST00000614819 1539 ntBASIC30.89■■■□□ 2.54
PCDHGC3Q9UN70 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
PCDHGC3Q9UN70 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
PCDHGC3Q9UN70 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.79■■■□□ 2.52
PCDHGC3Q9UN70 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.77■■■□□ 2.52
PCDHGC3Q9UN70 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
PCDHGC3Q9UN70 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
PCDHGC3Q9UN70 ZNRF2P1-201ENST00000441407 443 ntBASIC30.74■■■□□ 2.51
PCDHGC3Q9UN70 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
PCDHGC3Q9UN70 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
PCDHGC3Q9UN70 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms