Protein–RNA interactions for Protein: Q9BWD3

RTL8A, Retrotransposon Gag-like protein 8A, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8AQ9BWD3 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTL8AQ9BWD3 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
RTL8AQ9BWD3 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
RTL8AQ9BWD3 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC23.69■■□□□ 1.38
RTL8AQ9BWD3 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RTL8AQ9BWD3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC23.68■■□□□ 1.38
RTL8AQ9BWD3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RTL8AQ9BWD3 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC23.68■■□□□ 1.38
RTL8AQ9BWD3 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTL8AQ9BWD3 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTL8AQ9BWD3 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
RTL8AQ9BWD3 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
RTL8AQ9BWD3 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC23.64■■□□□ 1.37
RTL8AQ9BWD3 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC23.64■■□□□ 1.37
RTL8AQ9BWD3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC23.63■■□□□ 1.37
RTL8AQ9BWD3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTL8AQ9BWD3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTL8AQ9BWD3 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTL8AQ9BWD3 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTL8AQ9BWD3 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC23.62■■□□□ 1.37
RTL8AQ9BWD3 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC23.62■■□□□ 1.37
RTL8AQ9BWD3 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC23.59■■□□□ 1.37
RTL8AQ9BWD3 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RTL8AQ9BWD3 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RTL8AQ9BWD3 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
RTL8AQ9BWD3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
RTL8AQ9BWD3 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RTL8AQ9BWD3 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RTL8AQ9BWD3 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC23.52■■□□□ 1.36
RTL8AQ9BWD3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC23.52■■□□□ 1.36
RTL8AQ9BWD3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC23.52■■□□□ 1.36
RTL8AQ9BWD3 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.51■■□□□ 1.35
RTL8AQ9BWD3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RTL8AQ9BWD3 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
RTL8AQ9BWD3 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RTL8AQ9BWD3 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
RTL8AQ9BWD3 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
RTL8AQ9BWD3 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RTL8AQ9BWD3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RTL8AQ9BWD3 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
RTL8AQ9BWD3 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RTL8AQ9BWD3 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RTL8AQ9BWD3 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RTL8AQ9BWD3 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTL8AQ9BWD3 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RTL8AQ9BWD3 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.35
RTL8AQ9BWD3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC23.45■■□□□ 1.34
RTL8AQ9BWD3 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RTL8AQ9BWD3 AC120057.4-201ENST00000624722 1615 ntBASIC23.44■■□□□ 1.34
RTL8AQ9BWD3 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RTL8AQ9BWD3 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.43■■□□□ 1.34
RTL8AQ9BWD3 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTL8AQ9BWD3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC23.42■■□□□ 1.34
RTL8AQ9BWD3 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RTL8AQ9BWD3 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.42■■□□□ 1.34
RTL8AQ9BWD3 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RTL8AQ9BWD3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RTL8AQ9BWD3 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.41■■□□□ 1.34
RTL8AQ9BWD3 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RTL8AQ9BWD3 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RTL8AQ9BWD3 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC23.39■■□□□ 1.33
RTL8AQ9BWD3 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RTL8AQ9BWD3 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
RTL8AQ9BWD3 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RTL8AQ9BWD3 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC23.37■■□□□ 1.33
RTL8AQ9BWD3 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC23.36■■□□□ 1.33
RTL8AQ9BWD3 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC23.36■■□□□ 1.33
RTL8AQ9BWD3 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RTL8AQ9BWD3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RTL8AQ9BWD3 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RTL8AQ9BWD3 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
RTL8AQ9BWD3 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RTL8AQ9BWD3 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RTL8AQ9BWD3 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
RTL8AQ9BWD3 KLF16-203ENST00000592313 508 ntTSL 3 BASIC23.31■■□□□ 1.32
RTL8AQ9BWD3 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC23.3■■□□□ 1.32
RTL8AQ9BWD3 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RTL8AQ9BWD3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTL8AQ9BWD3 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RTL8AQ9BWD3 ST7-205ENST00000393446 2114 ntTSL 5 BASIC23.27■■□□□ 1.32
RTL8AQ9BWD3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC23.27■■□□□ 1.32
RTL8AQ9BWD3 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RTL8AQ9BWD3 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTL8AQ9BWD3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC23.25■■□□□ 1.31
RTL8AQ9BWD3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC23.25■■□□□ 1.31
RTL8AQ9BWD3 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTL8AQ9BWD3 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
RTL8AQ9BWD3 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RTL8AQ9BWD3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC23.22■■□□□ 1.31
RTL8AQ9BWD3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC23.22■■□□□ 1.31
RTL8AQ9BWD3 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RTL8AQ9BWD3 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RTL8AQ9BWD3 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC23.21■■□□□ 1.31
RTL8AQ9BWD3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RTL8AQ9BWD3 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RTL8AQ9BWD3 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTL8AQ9BWD3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC23.16■■□□□ 1.3
RTL8AQ9BWD3 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTL8AQ9BWD3 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
RTL8AQ9BWD3 RARRES2P7-201ENST00000567349 469 ntBASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms