Protein–RNA interactions for Protein: Q9BWD3

RTL8A, Retrotransposon Gag-like protein 8A, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8AQ9BWD3 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC28.9■■■□□ 2.22
RTL8AQ9BWD3 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
RTL8AQ9BWD3 AL356512.1-201ENST00000607453 1739 ntBASIC28.3■■■□□ 2.12
RTL8AQ9BWD3 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
RTL8AQ9BWD3 HES6-203ENST00000409160 1600 ntTSL 2 BASIC28.06■■■□□ 2.08
RTL8AQ9BWD3 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
RTL8AQ9BWD3 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
RTL8AQ9BWD3 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC27.81■■■□□ 2.04
RTL8AQ9BWD3 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC27.75■■■□□ 2.03
RTL8AQ9BWD3 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC27.71■■■□□ 2.03
RTL8AQ9BWD3 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC27.54■■■□□ 2
RTL8AQ9BWD3 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC27.53■■■□□ 2
RTL8AQ9BWD3 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC27.52■■■□□ 2
RTL8AQ9BWD3 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC27.11■■□□□ 1.93
RTL8AQ9BWD3 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RTL8AQ9BWD3 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC26.91■■□□□ 1.9
RTL8AQ9BWD3 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
RTL8AQ9BWD3 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
RTL8AQ9BWD3 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC26.68■■□□□ 1.86
RTL8AQ9BWD3 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC26.66■■□□□ 1.86
RTL8AQ9BWD3 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC26.58■■□□□ 1.85
RTL8AQ9BWD3 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
RTL8AQ9BWD3 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
RTL8AQ9BWD3 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
RTL8AQ9BWD3 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC26.5■■□□□ 1.83
RTL8AQ9BWD3 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
RTL8AQ9BWD3 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
RTL8AQ9BWD3 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RTL8AQ9BWD3 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC26.31■■□□□ 1.8
RTL8AQ9BWD3 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RTL8AQ9BWD3 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RTL8AQ9BWD3 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
RTL8AQ9BWD3 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC26.06■■□□□ 1.76
RTL8AQ9BWD3 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RTL8AQ9BWD3 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RTL8AQ9BWD3 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RTL8AQ9BWD3 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC25.99■■□□□ 1.75
RTL8AQ9BWD3 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RTL8AQ9BWD3 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
RTL8AQ9BWD3 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC25.85■■□□□ 1.73
RTL8AQ9BWD3 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RTL8AQ9BWD3 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RTL8AQ9BWD3 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
RTL8AQ9BWD3 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RTL8AQ9BWD3 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RTL8AQ9BWD3 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RTL8AQ9BWD3 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RTL8AQ9BWD3 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
RTL8AQ9BWD3 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC25.53■■□□□ 1.68
RTL8AQ9BWD3 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC25.52■■□□□ 1.68
RTL8AQ9BWD3 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
RTL8AQ9BWD3 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RTL8AQ9BWD3 ILK-212ENST00000532063 1617 ntTSL 2 BASIC25.51■■□□□ 1.67
RTL8AQ9BWD3 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
RTL8AQ9BWD3 INO80B-203ENST00000409917 796 ntTSL 2 BASIC25.4■■□□□ 1.66
RTL8AQ9BWD3 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
RTL8AQ9BWD3 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC25.37■■□□□ 1.65
RTL8AQ9BWD3 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
RTL8AQ9BWD3 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RTL8AQ9BWD3 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
RTL8AQ9BWD3 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RTL8AQ9BWD3 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
RTL8AQ9BWD3 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC25.3■■□□□ 1.64
RTL8AQ9BWD3 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RTL8AQ9BWD3 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RTL8AQ9BWD3 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC25.2■■□□□ 1.62
RTL8AQ9BWD3 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RTL8AQ9BWD3 AC015813.7-201ENST00000623294 581 ntBASIC25.18■■□□□ 1.62
RTL8AQ9BWD3 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RTL8AQ9BWD3 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RTL8AQ9BWD3 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RTL8AQ9BWD3 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
RTL8AQ9BWD3 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RTL8AQ9BWD3 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RTL8AQ9BWD3 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC25.06■■□□□ 1.6
RTL8AQ9BWD3 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
RTL8AQ9BWD3 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RTL8AQ9BWD3 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC24.98■■□□□ 1.59
RTL8AQ9BWD3 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RTL8AQ9BWD3 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
RTL8AQ9BWD3 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
RTL8AQ9BWD3 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
RTL8AQ9BWD3 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC24.85■■□□□ 1.57
RTL8AQ9BWD3 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
RTL8AQ9BWD3 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RTL8AQ9BWD3 AC145285.7-201ENST00000614819 1539 ntBASIC24.81■■□□□ 1.56
RTL8AQ9BWD3 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RTL8AQ9BWD3 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RTL8AQ9BWD3 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
RTL8AQ9BWD3 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RTL8AQ9BWD3 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
RTL8AQ9BWD3 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RTL8AQ9BWD3 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC24.68■■□□□ 1.54
RTL8AQ9BWD3 AC006077.2-201ENST00000623591 457 ntBASIC24.67■■□□□ 1.54
RTL8AQ9BWD3 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RTL8AQ9BWD3 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
RTL8AQ9BWD3 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC24.64■■□□□ 1.54
RTL8AQ9BWD3 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RTL8AQ9BWD3 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
RTL8AQ9BWD3 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms