Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC27.41■■□□□ 1.98
HMGCLL1Q8TB92 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
HMGCLL1Q8TB92 EBPL-203ENST00000378270 579 ntTSL 2 BASIC27.4■■□□□ 1.98
HMGCLL1Q8TB92 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
HMGCLL1Q8TB92 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
HMGCLL1Q8TB92 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
HMGCLL1Q8TB92 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
HMGCLL1Q8TB92 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
HMGCLL1Q8TB92 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC27.36■■□□□ 1.97
HMGCLL1Q8TB92 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
HMGCLL1Q8TB92 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
HMGCLL1Q8TB92 MVK-208ENST00000539696 608 ntTSL 5 BASIC27.35■■□□□ 1.97
HMGCLL1Q8TB92 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
HMGCLL1Q8TB92 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC27.34■■□□□ 1.97
HMGCLL1Q8TB92 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
HMGCLL1Q8TB92 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
HMGCLL1Q8TB92 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
HMGCLL1Q8TB92 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
HMGCLL1Q8TB92 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
HMGCLL1Q8TB92 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC27.27■■□□□ 1.96
HMGCLL1Q8TB92 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
HMGCLL1Q8TB92 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
HMGCLL1Q8TB92 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
HMGCLL1Q8TB92 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
HMGCLL1Q8TB92 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
HMGCLL1Q8TB92 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
HMGCLL1Q8TB92 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC27.25■■□□□ 1.95
HMGCLL1Q8TB92 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC27.24■■□□□ 1.95
HMGCLL1Q8TB92 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
HMGCLL1Q8TB92 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
HMGCLL1Q8TB92 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
HMGCLL1Q8TB92 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
HMGCLL1Q8TB92 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
HMGCLL1Q8TB92 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC27.18■■□□□ 1.94
HMGCLL1Q8TB92 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC27.18■■□□□ 1.94
HMGCLL1Q8TB92 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.18■■□□□ 1.94
HMGCLL1Q8TB92 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC27.17■■□□□ 1.94
HMGCLL1Q8TB92 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
HMGCLL1Q8TB92 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC27.16■■□□□ 1.94
HMGCLL1Q8TB92 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
HMGCLL1Q8TB92 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
HMGCLL1Q8TB92 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
HMGCLL1Q8TB92 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC27.13■■□□□ 1.93
HMGCLL1Q8TB92 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC27.13■■□□□ 1.93
HMGCLL1Q8TB92 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
HMGCLL1Q8TB92 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
HMGCLL1Q8TB92 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
HMGCLL1Q8TB92 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
HMGCLL1Q8TB92 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
HMGCLL1Q8TB92 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
HMGCLL1Q8TB92 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
HMGCLL1Q8TB92 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
HMGCLL1Q8TB92 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
HMGCLL1Q8TB92 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC27.05■■□□□ 1.92
HMGCLL1Q8TB92 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
HMGCLL1Q8TB92 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC27.04■■□□□ 1.92
HMGCLL1Q8TB92 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
HMGCLL1Q8TB92 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
HMGCLL1Q8TB92 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC27.03■■□□□ 1.92
HMGCLL1Q8TB92 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
HMGCLL1Q8TB92 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC27.01■■□□□ 1.91
HMGCLL1Q8TB92 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
HMGCLL1Q8TB92 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC27■■□□□ 1.91
HMGCLL1Q8TB92 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC27■■□□□ 1.91
HMGCLL1Q8TB92 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.99■■□□□ 1.91
HMGCLL1Q8TB92 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
HMGCLL1Q8TB92 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.96■■□□□ 1.91
HMGCLL1Q8TB92 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
HMGCLL1Q8TB92 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
HMGCLL1Q8TB92 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.95■■□□□ 1.91
HMGCLL1Q8TB92 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
HMGCLL1Q8TB92 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
HMGCLL1Q8TB92 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.92■■□□□ 1.9
HMGCLL1Q8TB92 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
HMGCLL1Q8TB92 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.91■■□□□ 1.9
HMGCLL1Q8TB92 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
HMGCLL1Q8TB92 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.89■■□□□ 1.89
HMGCLL1Q8TB92 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
HMGCLL1Q8TB92 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.87■■□□□ 1.89
HMGCLL1Q8TB92 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
HMGCLL1Q8TB92 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
HMGCLL1Q8TB92 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.86■■□□□ 1.89
HMGCLL1Q8TB92 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
HMGCLL1Q8TB92 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.86■■□□□ 1.89
HMGCLL1Q8TB92 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
HMGCLL1Q8TB92 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.85■■□□□ 1.89
HMGCLL1Q8TB92 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.84■■□□□ 1.89
HMGCLL1Q8TB92 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
HMGCLL1Q8TB92 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
HMGCLL1Q8TB92 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.79■■□□□ 1.88
HMGCLL1Q8TB92 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.79■■□□□ 1.88
HMGCLL1Q8TB92 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.79■■□□□ 1.88
HMGCLL1Q8TB92 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
HMGCLL1Q8TB92 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
HMGCLL1Q8TB92 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
HMGCLL1Q8TB92 RARRES2P7-201ENST00000567349 469 ntBASIC26.76■■□□□ 1.87
HMGCLL1Q8TB92 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.75■■□□□ 1.87
HMGCLL1Q8TB92 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
HMGCLL1Q8TB92 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
HMGCLL1Q8TB92 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.74■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms