Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC33.13■■■□□ 2.89
HMGCLL1Q8TB92 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
HMGCLL1Q8TB92 AL356512.1-201ENST00000607453 1739 ntBASIC32.23■■■□□ 2.75
HMGCLL1Q8TB92 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC32.21■■■□□ 2.75
HMGCLL1Q8TB92 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
HMGCLL1Q8TB92 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.11■■■□□ 2.73
HMGCLL1Q8TB92 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.09■■■□□ 2.73
HMGCLL1Q8TB92 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
HMGCLL1Q8TB92 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC31.87■■■□□ 2.69
HMGCLL1Q8TB92 HES6-203ENST00000409160 1600 ntTSL 2 BASIC31.78■■■□□ 2.68
HMGCLL1Q8TB92 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC31.44■■■□□ 2.62
HMGCLL1Q8TB92 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC31.34■■■□□ 2.61
HMGCLL1Q8TB92 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
HMGCLL1Q8TB92 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC31.21■■■□□ 2.59
HMGCLL1Q8TB92 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.17■■■□□ 2.58
HMGCLL1Q8TB92 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.98■■■□□ 2.55
HMGCLL1Q8TB92 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.93■■■□□ 2.54
HMGCLL1Q8TB92 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
HMGCLL1Q8TB92 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
HMGCLL1Q8TB92 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.8■■■□□ 2.52
HMGCLL1Q8TB92 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC30.72■■■□□ 2.51
HMGCLL1Q8TB92 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.65■■■□□ 2.5
HMGCLL1Q8TB92 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC30.6■■■□□ 2.49
HMGCLL1Q8TB92 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC30.52■■■□□ 2.48
HMGCLL1Q8TB92 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.47
HMGCLL1Q8TB92 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
HMGCLL1Q8TB92 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
HMGCLL1Q8TB92 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
HMGCLL1Q8TB92 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC30.34■■■□□ 2.45
HMGCLL1Q8TB92 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
HMGCLL1Q8TB92 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
HMGCLL1Q8TB92 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
HMGCLL1Q8TB92 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.19■■■□□ 2.42
HMGCLL1Q8TB92 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
HMGCLL1Q8TB92 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
HMGCLL1Q8TB92 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
HMGCLL1Q8TB92 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
HMGCLL1Q8TB92 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
HMGCLL1Q8TB92 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC29.74■■■□□ 2.35
HMGCLL1Q8TB92 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC29.6■■■□□ 2.33
HMGCLL1Q8TB92 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
HMGCLL1Q8TB92 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
HMGCLL1Q8TB92 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
HMGCLL1Q8TB92 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC29.56■■■□□ 2.32
HMGCLL1Q8TB92 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
HMGCLL1Q8TB92 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
HMGCLL1Q8TB92 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
HMGCLL1Q8TB92 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
HMGCLL1Q8TB92 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC29.48■■■□□ 2.31
HMGCLL1Q8TB92 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.47■■■□□ 2.31
HMGCLL1Q8TB92 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC29.44■■■□□ 2.3
HMGCLL1Q8TB92 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC29.43■■■□□ 2.3
HMGCLL1Q8TB92 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
HMGCLL1Q8TB92 INO80B-203ENST00000409917 796 ntTSL 2 BASIC29.35■■■□□ 2.29
HMGCLL1Q8TB92 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
HMGCLL1Q8TB92 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
HMGCLL1Q8TB92 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC29.27■■■□□ 2.28
HMGCLL1Q8TB92 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.27
HMGCLL1Q8TB92 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC29.12■■■□□ 2.25
HMGCLL1Q8TB92 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
HMGCLL1Q8TB92 AC015813.7-201ENST00000623294 581 ntBASIC29.09■■■□□ 2.25
HMGCLL1Q8TB92 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
HMGCLL1Q8TB92 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
HMGCLL1Q8TB92 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
HMGCLL1Q8TB92 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC29■■■□□ 2.23
HMGCLL1Q8TB92 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
HMGCLL1Q8TB92 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
HMGCLL1Q8TB92 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.9■■■□□ 2.22
HMGCLL1Q8TB92 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
HMGCLL1Q8TB92 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
HMGCLL1Q8TB92 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.86■■■□□ 2.21
HMGCLL1Q8TB92 ILK-212ENST00000532063 1617 ntTSL 2 BASIC28.83■■■□□ 2.21
HMGCLL1Q8TB92 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC28.8■■■□□ 2.2
HMGCLL1Q8TB92 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
HMGCLL1Q8TB92 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
HMGCLL1Q8TB92 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC28.76■■■□□ 2.19
HMGCLL1Q8TB92 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC28.75■■■□□ 2.19
HMGCLL1Q8TB92 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.75■■■□□ 2.19
HMGCLL1Q8TB92 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC28.74■■■□□ 2.19
HMGCLL1Q8TB92 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
HMGCLL1Q8TB92 AC006077.2-201ENST00000623591 457 ntBASIC28.67■■■□□ 2.18
HMGCLL1Q8TB92 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
HMGCLL1Q8TB92 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
HMGCLL1Q8TB92 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
HMGCLL1Q8TB92 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
HMGCLL1Q8TB92 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC28.58■■■□□ 2.17
HMGCLL1Q8TB92 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
HMGCLL1Q8TB92 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
HMGCLL1Q8TB92 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
HMGCLL1Q8TB92 ZNRF2P1-201ENST00000441407 443 ntBASIC28.51■■■□□ 2.15
HMGCLL1Q8TB92 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
HMGCLL1Q8TB92 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
HMGCLL1Q8TB92 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
HMGCLL1Q8TB92 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
HMGCLL1Q8TB92 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
HMGCLL1Q8TB92 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
HMGCLL1Q8TB92 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
HMGCLL1Q8TB92 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
HMGCLL1Q8TB92 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC28.3■■■□□ 2.12
HMGCLL1Q8TB92 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms