Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PAX4O43316 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PAX4O43316 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.63■□□□□ 0.73
PAX4O43316 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PAX4O43316 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PAX4O43316 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PAX4O43316 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PAX4O43316 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
PAX4O43316 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PAX4O43316 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC19.56■□□□□ 0.72
PAX4O43316 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC19.56■□□□□ 0.72
PAX4O43316 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PAX4O43316 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.54■□□□□ 0.72
PAX4O43316 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.54■□□□□ 0.72
PAX4O43316 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.54■□□□□ 0.72
PAX4O43316 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PAX4O43316 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
PAX4O43316 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PAX4O43316 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PAX4O43316 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC19.52■□□□□ 0.72
PAX4O43316 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC19.51■□□□□ 0.71
PAX4O43316 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PAX4O43316 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PAX4O43316 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PAX4O43316 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PAX4O43316 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PAX4O43316 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PAX4O43316 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PAX4O43316 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.49■□□□□ 0.71
PAX4O43316 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PAX4O43316 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PAX4O43316 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PAX4O43316 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
PAX4O43316 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PAX4O43316 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PAX4O43316 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PAX4O43316 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PAX4O43316 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC19.45■□□□□ 0.7
PAX4O43316 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PAX4O43316 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.45■□□□□ 0.7
PAX4O43316 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PAX4O43316 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PAX4O43316 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.44■□□□□ 0.7
PAX4O43316 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC19.43■□□□□ 0.7
PAX4O43316 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PAX4O43316 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.43■□□□□ 0.7
PAX4O43316 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PAX4O43316 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PAX4O43316 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
PAX4O43316 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PAX4O43316 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.4■□□□□ 0.7
PAX4O43316 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PAX4O43316 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
PAX4O43316 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.4■□□□□ 0.7
PAX4O43316 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC19.39■□□□□ 0.7
PAX4O43316 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PAX4O43316 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PAX4O43316 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.36■□□□□ 0.69
PAX4O43316 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.35■□□□□ 0.69
PAX4O43316 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PAX4O43316 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PAX4O43316 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
PAX4O43316 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PAX4O43316 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PAX4O43316 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC19.32■□□□□ 0.68
PAX4O43316 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC19.32■□□□□ 0.68
PAX4O43316 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PAX4O43316 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PAX4O43316 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.3■□□□□ 0.68
PAX4O43316 RARRES2P7-201ENST00000567349 469 ntBASIC19.29■□□□□ 0.68
PAX4O43316 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PAX4O43316 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PAX4O43316 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC19.28■□□□□ 0.68
PAX4O43316 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PAX4O43316 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.27■□□□□ 0.68
PAX4O43316 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PAX4O43316 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PAX4O43316 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC19.26■□□□□ 0.67
PAX4O43316 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PAX4O43316 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PAX4O43316 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PAX4O43316 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.24■□□□□ 0.67
PAX4O43316 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PAX4O43316 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.24■□□□□ 0.67
PAX4O43316 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PAX4O43316 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PAX4O43316 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PAX4O43316 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PAX4O43316 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PAX4O43316 AC120057.4-201ENST00000624722 1615 ntBASIC19.22■□□□□ 0.67
PAX4O43316 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PAX4O43316 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PAX4O43316 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PAX4O43316 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PAX4O43316 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PAX4O43316 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PAX4O43316 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PAX4O43316 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PAX4O43316 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
PAX4O43316 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 249.1 ms