Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRGV4A0A0C4DH28 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRGV4A0A0C4DH28 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC19.79■□□□□ 0.76
TRGV4A0A0C4DH28 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC19.78■□□□□ 0.76
TRGV4A0A0C4DH28 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.75
TRGV4A0A0C4DH28 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TRGV4A0A0C4DH28 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRGV4A0A0C4DH28 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRGV4A0A0C4DH28 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC19.76■□□□□ 0.75
TRGV4A0A0C4DH28 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRGV4A0A0C4DH28 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRGV4A0A0C4DH28 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
TRGV4A0A0C4DH28 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRGV4A0A0C4DH28 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRGV4A0A0C4DH28 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
TRGV4A0A0C4DH28 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC19.72■□□□□ 0.75
TRGV4A0A0C4DH28 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
TRGV4A0A0C4DH28 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC19.71■□□□□ 0.75
TRGV4A0A0C4DH28 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TRGV4A0A0C4DH28 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
TRGV4A0A0C4DH28 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRGV4A0A0C4DH28 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.69■□□□□ 0.74
TRGV4A0A0C4DH28 AL031258.1-201ENST00000623562 325 ntBASIC19.69■□□□□ 0.74
TRGV4A0A0C4DH28 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRGV4A0A0C4DH28 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
TRGV4A0A0C4DH28 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRGV4A0A0C4DH28 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRGV4A0A0C4DH28 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.66■□□□□ 0.74
TRGV4A0A0C4DH28 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRGV4A0A0C4DH28 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
TRGV4A0A0C4DH28 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRGV4A0A0C4DH28 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.64■□□□□ 0.73
TRGV4A0A0C4DH28 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRGV4A0A0C4DH28 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRGV4A0A0C4DH28 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.63■□□□□ 0.73
TRGV4A0A0C4DH28 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRGV4A0A0C4DH28 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
TRGV4A0A0C4DH28 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC19.62■□□□□ 0.73
TRGV4A0A0C4DH28 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRGV4A0A0C4DH28 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TRGV4A0A0C4DH28 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRGV4A0A0C4DH28 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRGV4A0A0C4DH28 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC19.6■□□□□ 0.73
TRGV4A0A0C4DH28 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.6■□□□□ 0.73
TRGV4A0A0C4DH28 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRGV4A0A0C4DH28 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRGV4A0A0C4DH28 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRGV4A0A0C4DH28 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRGV4A0A0C4DH28 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TRGV4A0A0C4DH28 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC19.57■□□□□ 0.72
TRGV4A0A0C4DH28 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRGV4A0A0C4DH28 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRGV4A0A0C4DH28 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TRGV4A0A0C4DH28 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRGV4A0A0C4DH28 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRGV4A0A0C4DH28 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TRGV4A0A0C4DH28 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC19.54■□□□□ 0.72
TRGV4A0A0C4DH28 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRGV4A0A0C4DH28 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
TRGV4A0A0C4DH28 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.51■□□□□ 0.71
TRGV4A0A0C4DH28 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TRGV4A0A0C4DH28 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRGV4A0A0C4DH28 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRGV4A0A0C4DH28 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.49■□□□□ 0.71
TRGV4A0A0C4DH28 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.49■□□□□ 0.71
TRGV4A0A0C4DH28 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRGV4A0A0C4DH28 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRGV4A0A0C4DH28 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRGV4A0A0C4DH28 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.47■□□□□ 0.71
TRGV4A0A0C4DH28 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRGV4A0A0C4DH28 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRGV4A0A0C4DH28 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRGV4A0A0C4DH28 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRGV4A0A0C4DH28 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRGV4A0A0C4DH28 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC19.46■□□□□ 0.71
TRGV4A0A0C4DH28 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TRGV4A0A0C4DH28 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRGV4A0A0C4DH28 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRGV4A0A0C4DH28 AC120057.4-201ENST00000624722 1615 ntBASIC19.45■□□□□ 0.7
TRGV4A0A0C4DH28 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRGV4A0A0C4DH28 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRGV4A0A0C4DH28 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRGV4A0A0C4DH28 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.43■□□□□ 0.7
TRGV4A0A0C4DH28 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRGV4A0A0C4DH28 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRGV4A0A0C4DH28 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRGV4A0A0C4DH28 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC19.42■□□□□ 0.7
TRGV4A0A0C4DH28 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRGV4A0A0C4DH28 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRGV4A0A0C4DH28 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.4■□□□□ 0.7
TRGV4A0A0C4DH28 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TRGV4A0A0C4DH28 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
TRGV4A0A0C4DH28 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
TRGV4A0A0C4DH28 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.4■□□□□ 0.7
TRGV4A0A0C4DH28 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.39■□□□□ 0.69
TRGV4A0A0C4DH28 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.38■□□□□ 0.69
TRGV4A0A0C4DH28 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRGV4A0A0C4DH28 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRGV4A0A0C4DH28 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.37■□□□□ 0.69
TRGV4A0A0C4DH28 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms