RNA–Protein interactions for RNA: ENST00000374566.7

EPB41L4B-202, Transcript of erythrocyte membrane protein band 4.1 like 4B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene EPB41L4B, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L4B-202ENST00000374566 DCAF8L2P0C7V8 631 aa41.35■■■■■ 4.21
EPB41L4B-202ENST00000374566 SUPT5HO00267 1087 aaKnown RBP39.08■■■■□ 3.85
EPB41L4B-202ENST00000374566 NISCHQ9Y2I1 1504 aa38.47■■■■□ 3.75
EPB41L4B-202ENST00000374566 SHROOM4Q9ULL8 1493 aa38.4■■■■□ 3.74
EPB41L4B-202ENST00000374566 EHMT2Q96KQ7 1210 aa38.2■■■■□ 3.71
EPB41L4B-202ENST00000374566 APLP2Q06481 763 aa37.17■■■■□ 3.54
EPB41L4B-202ENST00000374566 FAM9AQ8IZU1 332 aaPredicted RBP36.99■■■■□ 3.51
EPB41L4B-202ENST00000374566 TTBK1Q5TCY1 1321 aaPredicted RBP36.87■■■■□ 3.49
EPB41L4B-202ENST00000374566 PELP1Q8IZL8 1130 aaKnown RBP36.86■■■■□ 3.49
EPB41L4B-202ENST00000374566 RANGAP1P46060 587 aaPredicted RBP36.5■■■■□ 3.43
EPB41L4B-202ENST00000374566 PCGF6Q9BYE7 350 aa36.4■■■■□ 3.42
EPB41L4B-202ENST00000374566 ATP1B4Q9UN42 357 aaPredicted RBP36.13■■■■□ 3.37
EPB41L4B-202ENST00000374566 TRIM41Q8WV44 630 aa36.07■■■■□ 3.36
EPB41L4B-202ENST00000374566 CCER1Q8TC90 406 aaPredicted RBP35.85■■■■□ 3.33
EPB41L4B-202ENST00000374566 UBTFP17480 764 aaKnown RBP35.78■■■■□ 3.32
EPB41L4B-202ENST00000374566 CENPBP07199 599 aaPredicted RBP35.61■■■■□ 3.29
EPB41L4B-202ENST00000374566 ZEB1P37275 1124 aaPredicted RBP35.56■■■■□ 3.28
EPB41L4B-202ENST00000374566 ERICH6Q7L0X2 663 aa35.52■■■■□ 3.28
EPB41L4B-202ENST00000374566 PPARGC1BQ86YN6 1023 aaKnown RBP35.35■■■■□ 3.25
EPB41L4B-202ENST00000374566 YTHDC1Q96MU7 727 aaKnown RBP35.23■■■■□ 3.23
EPB41L4B-202ENST00000374566 NEFLP07196 543 aa35.03■■■■□ 3.2
EPB41L4B-202ENST00000374566 ITGAEP38570 1179 aa34.83■■■■□ 3.17
EPB41L4B-202ENST00000374566 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.8■■■■□ 3.16
EPB41L4B-202ENST00000374566 HNRNPUL2Q1KMD3 747 aaKnown RBP34.8■■■■□ 3.16
EPB41L4B-202ENST00000374566 MYT1LQ9UL68 1186 aa34.79■■■■□ 3.16
EPB41L4B-202ENST00000374566 TRIM26Q12899 539 aaPredicted RBP34.66■■■■□ 3.14
EPB41L4B-202ENST00000374566 POLR3GLQ9BT43 218 aa34.65■■■■□ 3.14
EPB41L4B-202ENST00000374566 LOC105371045A0A1W2PR82 267 aa34.51■■■■□ 3.11
EPB41L4B-202ENST00000374566 CNGB1Q14028 1251 aaPredicted RBP34.39■■■■□ 3.1
EPB41L4B-202ENST00000374566 CHIC1Q5VXU3 224 aa34.3■■■■□ 3.08
EPB41L4B-202ENST00000374566 HRCP23327 699 aa34.26■■■■□ 3.07
EPB41L4B-202ENST00000374566 DAXXQ9UER7 740 aaPredicted RBP34.1■■■■□ 3.05
EPB41L4B-202ENST00000374566 SLC4A1APQ9BWU0 796 aaKnown RBP34.03■■■■□ 3.04
EPB41L4B-202ENST00000374566 PABPN1Q86U42 306 aaKnown RBP eCLIP33.86■■■■□ 3.01
EPB41L4B-202ENST00000374566 FAM50AQ14320 339 aaKnown RBP33.83■■■■□ 3.01
EPB41L4B-202ENST00000374566 TRIM52Q96A61 297 aa33.68■■■□□ 2.98
EPB41L4B-202ENST00000374566 ABCC9O60706 1549 aa33.68■■■□□ 2.98
EPB41L4B-202ENST00000374566 MYT1Q01538 1121 aa33.68■■■□□ 2.98
EPB41L4B-202ENST00000374566 NEUROD1Q13562 356 aa33.56■■■□□ 2.96
EPB41L4B-202ENST00000374566 DIEXFQ68CQ4 756 aaKnown RBP33.56■■■□□ 2.96
EPB41L4B-202ENST00000374566 CLSPNQ9HAW4 1339 aa33.49■■■□□ 2.95
EPB41L4B-202ENST00000374566 FBLN2P98095 1184 aa33.39■■■□□ 2.94
EPB41L4B-202ENST00000374566 ZNF326Q5BKZ1 582 aaKnown RBP33.38■■■□□ 2.93
EPB41L4B-202ENST00000374566 ZNF316A6NFI3 1004 aaPredicted RBP33.33■■■□□ 2.93
EPB41L4B-202ENST00000374566 RTL5Q5HYW3 569 aaPredicted RBP33.15■■■□□ 2.9
EPB41L4B-202ENST00000374566 BCANQ96GW7 911 aa33.14■■■□□ 2.9
EPB41L4B-202ENST00000374566 ARID3CA6NKF2 412 aa33.12■■■□□ 2.89
EPB41L4B-202ENST00000374566 P3H3Q8IVL6 736 aa33.08■■■□□ 2.89
EPB41L4B-202ENST00000374566 ANP32CO43423 234 aa33.04■■■□□ 2.88
EPB41L4B-202ENST00000374566 SLC24A1O60721 1099 aa32.91■■■□□ 2.86
EPB41L4B-202ENST00000374566 BCL11AQ9H165 835 aa32.88■■■□□ 2.85
EPB41L4B-202ENST00000374566 ZBTB47Q9UFB7 747 aaPredicted RBP32.83■■■□□ 2.85
EPB41L4B-202ENST00000374566 ZNF777Q9ULD5 760 aaPredicted RBP32.82■■■□□ 2.84
EPB41L4B-202ENST00000374566 GTF3C3Q9Y5Q9 886 aa32.81■■■□□ 2.84
EPB41L4B-202ENST00000374566 CANXP27824 592 aaKnown RBP32.75■■■□□ 2.83
EPB41L4B-202ENST00000374566 CSRNP3Q8WYN3 585 aa32.71■■■□□ 2.83
EPB41L4B-202ENST00000374566 CDK11AQ9UQ88 783 aaPredicted RBP32.69■■■□□ 2.82
EPB41L4B-202ENST00000374566 NEFMP07197 916 aa32.6■■■□□ 2.81
EPB41L4B-202ENST00000374566 CHGAP10645 457 aaKnown RBP32.39■■■□□ 2.78
EPB41L4B-202ENST00000374566 PLPPR3Q6T4P5 718 aa32.38■■■□□ 2.77
EPB41L4B-202ENST00000374566 ESF1Q9H501 851 aaKnown RBP32.37■■■□□ 2.77
EPB41L4B-202ENST00000374566 SCRIBQ14160 1630 aa32.3■■■□□ 2.76
EPB41L4B-202ENST00000374566 STAG3Q9UJ98 1225 aa32.28■■■□□ 2.76
EPB41L4B-202ENST00000374566 NPM2Q86SE8 214 aaKnown RBP32.23■■■□□ 2.75
EPB41L4B-202ENST00000374566 TONSLQ96HA7 1378 aa32.22■■■□□ 2.75
EPB41L4B-202ENST00000374566 ACIN1Q9UKV3 1341 aaKnown RBP32.18■■■□□ 2.74
EPB41L4B-202ENST00000374566 CHIC2Q9UKJ5 165 aa32.15■■■□□ 2.74
EPB41L4B-202ENST00000374566 ANP32AP39687 249 aaKnown RBP32.15■■■□□ 2.74
EPB41L4B-202ENST00000374566 NPM1P06748 294 aaKnown RBP eCLIP32.11■■■□□ 2.73
EPB41L4B-202ENST00000374566 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.11■■■□□ 2.73
EPB41L4B-202ENST00000374566 FAM9BQ8IZU0 186 aa32.08■■■□□ 2.73
EPB41L4B-202ENST00000374566 SALL2Q9Y467 1007 aaPredicted RBP32.07■■■□□ 2.72
EPB41L4B-202ENST00000374566 DDX10Q13206 875 aaKnown RBP32.06■■■□□ 2.72
EPB41L4B-202ENST00000374566 FKBP8Q14318 412 aa32.04■■■□□ 2.72
EPB41L4B-202ENST00000374566 HNRNPUQ00839 825 aaKnown RBP eCLIP32.03■■■□□ 2.72
EPB41L4B-202ENST00000374566 KDM2AQ9Y2K7 1162 aa31.89■■■□□ 2.7
EPB41L4B-202ENST00000374566 HSP90AA1P07900 732 aaKnown RBP31.86■■■□□ 2.69
EPB41L4B-202ENST00000374566 TMC1Q8TDI8 760 aa31.81■■■□□ 2.68
EPB41L4B-202ENST00000374566 TSPY4P0CV99 314 aa31.79■■■□□ 2.68
EPB41L4B-202ENST00000374566 TSPY10P0CW01 314 aa31.79■■■□□ 2.68
EPB41L4B-202ENST00000374566 CHMP7Q8WUX9 453 aaPredicted RBP31.75■■■□□ 2.67
EPB41L4B-202ENST00000374566 SENP3Q9H4L4 574 aaPredicted RBP31.75■■■□□ 2.67
EPB41L4B-202ENST00000374566 MTUS2Q5JR59 1369 aa31.74■■■□□ 2.67
EPB41L4B-202ENST00000374566 UPF2Q9HAU5 1272 aaKnown RBP31.73■■■□□ 2.67
EPB41L4B-202ENST00000374566 ZCCHC6Q5VYS8 1495 aaKnown RBP31.72■■■□□ 2.67
EPB41L4B-202ENST00000374566 WDR43Q15061 677 aaKnown RBP eCLIP31.71■■■□□ 2.67
EPB41L4B-202ENST00000374566 HIRIP3Q9BW71 556 aaPredicted RBP31.69■■■□□ 2.66
EPB41L4B-202ENST00000374566 SCAF1Q9H7N4 1312 aaKnown RBP31.68■■■□□ 2.66
EPB41L4B-202ENST00000374566 DCAF1Q9Y4B6 1507 aa31.65■■■□□ 2.66
EPB41L4B-202ENST00000374566 MRS2Q9HD23 443 aa31.65■■■□□ 2.66
EPB41L4B-202ENST00000374566 CCDC136Q96JN2 1154 aa31.63■■■□□ 2.65
EPB41L4B-202ENST00000374566 ANP32BQ92688 251 aaKnown RBP31.62■■■□□ 2.65
EPB41L4B-202ENST00000374566 RRP7BPQ9NSQ0 103 aa31.6■■■□□ 2.65
EPB41L4B-202ENST00000374566 PLEKHG5O94827 1062 aa31.57■■■□□ 2.64
EPB41L4B-202ENST00000374566 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.57■■■□□ 2.64
EPB41L4B-202ENST00000374566 KCNH8Q96L42 1107 aa31.56■■■□□ 2.64
EPB41L4B-202ENST00000374566 CLIP1P30622 1438 aa31.52■■■□□ 2.64
EPB41L4B-202ENST00000374566 ZBTB7CA1YPR0 619 aa31.51■■■□□ 2.63
EPB41L4B-202ENST00000374566 IRX6P78412 446 aaPredicted RBP31.51■■■□□ 2.63
EPB41L4B-202ENST00000374566 A0A0G2JS52 829 aa31.5■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms