Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.842e-6■■■■□ 20.8
SRSF1Q07955 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.842e-6■■■■□ 20.8
SRSF1Q07955 LYPLAL1-209ENST00000478794 475 ntTSL 23.37□□□□□ -1.872e-6■■■■□ 20.8
SRSF1Q07955 LYPLAL1-205ENST00000469590 1701 ntTSL 33.11□□□□□ -1.912e-6■■■■□ 20.8
SRSF1Q07955 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.121e-8■■■■□ 20.8
SRSF1Q07955 FDPS-208ENST00000470171 746 ntTSL 214.32□□□□□ -0.121e-8■■■■□ 20.8
SRSF1Q07955 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.131e-8■■■■□ 20.8
SRSF1Q07955 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.171e-8■■■■□ 20.8
SRSF1Q07955 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.211e-8■■■■□ 20.8
SRSF1Q07955 FDPS-213ENST00000489003 976 ntTSL 213.75□□□□□ -0.211e-8■■■■□ 20.8
SRSF1Q07955 FDPS-216ENST00000491013 912 ntTSL 513.68□□□□□ -0.221e-8■■■■□ 20.8
SRSF1Q07955 FDPS-207ENST00000468479 938 ntTSL 212.31□□□□□ -0.441e-8■■■■□ 20.8
SRSF1Q07955 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC12□□□□□ -0.491e-8■■■■□ 20.8
SRSF1Q07955 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC11.72□□□□□ -0.531e-8■■■■□ 20.8
SRSF1Q07955 FDPS-211ENST00000477057 741 ntTSL 211.54□□□□□ -0.561e-8■■■■□ 20.8
SRSF1Q07955 NFE2L2-205ENST00000430047 451 ntTSL 321.36■■□□□ 1.011e-6■■■■□ 20.8
SRSF1Q07955 WDR73-215ENST00000560182 542 ntTSL 420.47■□□□□ 0.871e-6■■■■□ 20.8
SRSF1Q07955 DDX11-220ENST00000542244 1193 ntTSL 1 (best)19.38■□□□□ 0.691e-6■■■■□ 20.8
SRSF1Q07955 FAM193B-211ENST00000508298 479 ntTSL 518.05■□□□□ 0.484e-8■■■■□ 20.8
SRSF1Q07955 RNF207-207ENST00000492476 612 ntTSL 217.65■□□□□ 0.423e-7■■■■□ 20.8
SRSF1Q07955 PHRF1-204ENST00000532550 748 ntTSL 316.24■□□□□ 0.191e-6■■■■□ 20.8
SRSF1Q07955 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.124e-8■■■■□ 20.8
SRSF1Q07955 DDX11-226ENST00000543756 613 ntTSL 315.47■□□□□ 0.071e-6■■■■□ 20.8
SRSF1Q07955 DDX11-218ENST00000542129 1561 ntTSL 214.23□□□□□ -0.131e-6■■■■□ 20.8
SRSF1Q07955 DDX11-205ENST00000438391 1135 ntTSL 514.13□□□□□ -0.151e-6■■■■□ 20.8
SRSF1Q07955 DDX11-217ENST00000540935 1210 ntTSL 214.07□□□□□ -0.161e-6■■■■□ 20.8
SRSF1Q07955 IPO4-220ENST00000561462 1864 ntTSL 213.76□□□□□ -0.211e-9■■■■□ 20.8
SRSF1Q07955 DDX11-206ENST00000535158 1718 ntTSL 212.82□□□□□ -0.361e-6■■■■□ 20.8
SRSF1Q07955 FAM193B-208ENST00000506955 4604 ntTSL 1 (best)12.82□□□□□ -0.364e-8■■■■□ 20.8
SRSF1Q07955 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.36□□□□□ -0.431e-6■■■■□ 20.8
SRSF1Q07955 WDR73-220ENST00000561434 582 ntTSL 412.17□□□□□ -0.461e-6■■■■□ 20.8
SRSF1Q07955 GINS1-204ENST00000484893 583 ntTSL 511.74□□□□□ -0.531e-6■■■■□ 20.8
SRSF1Q07955 DDX11-227ENST00000544652 400 ntTSL 511.56□□□□□ -0.561e-6■■■■□ 20.8
SRSF1Q07955 DDX11-211ENST00000538345 498 ntTSL 511.54□□□□□ -0.561e-6■■■■□ 20.8
SRSF1Q07955 DDX11-203ENST00000415475 883 ntTSL 311.43□□□□□ -0.581e-6■■■■□ 20.8
SRSF1Q07955 PSMD1-204ENST00000431051 2506 ntTSL 1 (best)11.36□□□□□ -0.591e-12■■■■□ 20.8
SRSF1Q07955 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.661e-6■■■■□ 20.8
SRSF1Q07955 PSMD1-205ENST00000440838 761 ntTSL 310.53□□□□□ -0.721e-12■■■■□ 20.8
SRSF1Q07955 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.821e-6■■■■□ 20.8
SRSF1Q07955 IPO4-211ENST00000560155 3485 ntTSL 1 (best)9.47□□□□□ -0.891e-9■■■■□ 20.8
SRSF1Q07955 AL136295.4-201ENST00000561419 4351 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.91e-9■■■■□ 20.8
SRSF1Q07955 NFE2L2-211ENST00000464747 2749 ntTSL 2 BASIC9.35□□□□□ -0.911e-6■■■■□ 20.8
SRSF1Q07955 PSMD1-202ENST00000373635 3230 ntTSL 5 BASIC9.21□□□□□ -0.931e-12■■■■□ 20.8
SRSF1Q07955 IPO4-214ENST00000560798 3581 ntTSL 29.2□□□□□ -0.941e-9■■■■□ 20.8
SRSF1Q07955 IPO4-203ENST00000558046 3440 ntTSL 29.16□□□□□ -0.941e-9■■■■□ 20.8
SRSF1Q07955 IPO4-218ENST00000561199 3249 ntTSL 29.1□□□□□ -0.951e-9■■■■□ 20.8
SRSF1Q07955 IPO4-207ENST00000558780 3540 ntTSL 29.04□□□□□ -0.961e-9■■■■□ 20.8
SRSF1Q07955 WDR73-203ENST00000558019 528 ntTSL 49.03□□□□□ -0.961e-6■■■■□ 20.8
SRSF1Q07955 DDX11-213ENST00000539049 3471 ntTSL 58.92□□□□□ -0.981e-6■■■■□ 20.8
SRSF1Q07955 DDX11-208ENST00000536265 3603 ntTSL 58.87□□□□□ -0.991e-6■■■■□ 20.8
SRSF1Q07955 PSMD1-201ENST00000308696 3326 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -11e-12■■■■□ 20.8
SRSF1Q07955 NFE2L2-214ENST00000588123 814 ntTSL 58.63□□□□□ -1.031e-6■■■■□ 20.8
SRSF1Q07955 IPO4-209ENST00000559588 3537 ntTSL 1 (best)8.61□□□□□ -1.031e-9■■■■□ 20.8
SRSF1Q07955 IPO4-217ENST00000561090 3632 ntTSL 28.56□□□□□ -1.041e-9■■■■□ 20.8
SRSF1Q07955 PSMD1-203ENST00000409643 2901 ntTSL 5 BASIC8.44□□□□□ -1.061e-12■■■■□ 20.8
SRSF1Q07955 IPO4-201ENST00000354464 3646 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.061e-9■■■■□ 20.8
SRSF1Q07955 DDX11-201ENST00000228264 3717 ntTSL 1 (best) BASIC8.17□□□□□ -1.11e-6■■■■□ 20.8
SRSF1Q07955 DDX11-204ENST00000435753 4182 ntTSL 58.13□□□□□ -1.111e-6■■■■□ 20.8
SRSF1Q07955 DDX11-202ENST00000350437 3724 ntTSL 1 (best) BASIC8.05□□□□□ -1.121e-6■■■■□ 20.8
SRSF1Q07955 WDR73-216ENST00000560252 1180 ntTSL 27.85□□□□□ -1.151e-6■■■■□ 20.8
SRSF1Q07955 DDX11-229ENST00000545668 3751 ntTSL 1 (best) BASIC7.44□□□□□ -1.221e-6■■■■□ 20.8
SRSF1Q07955 TOP1-201ENST00000361337 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.291e-6■■■■□ 20.8
SRSF1Q07955 GINS1-201ENST00000262460 3249 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.371e-6■■■■□ 20.8
SRSF1Q07955 NFE2L2-213ENST00000586532 942 ntTSL 54.87□□□□□ -1.631e-6■■■■□ 20.8
SRSF1Q07955 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.551e-6■■■■□ 20.8
SRSF1Q07955 FAM182B-205ENST00000478164 992 ntTSL 515.81■□□□□ 0.122e-8■■■■□ 20.8
SRSF1Q07955 FAM182B-207ENST00000582267 832 ntTSL 513.66□□□□□ -0.222e-8■■■■□ 20.8
SRSF1Q07955 IKBKG-203ENST00000440286 960 ntTSL 520.52■□□□□ 0.885e-7■■■■□ 20.8
SRSF1Q07955 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.5■□□□□ 0.875e-7■■■■□ 20.8
SRSF1Q07955 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.5■□□□□ 0.875e-7■■■■□ 20.8
SRSF1Q07955 IKBKG-201ENST00000413620 892 ntTSL 519.7■□□□□ 0.745e-7■■■■□ 20.8
SRSF1Q07955 IKBKG-210ENST00000615186 488 ntTSL 519.47■□□□□ 0.715e-7■■■■□ 20.8
SRSF1Q07955 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.19■□□□□ 0.55e-7■■■■□ 20.8
SRSF1Q07955 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.245e-7■■■■□ 20.8
SRSF1Q07955 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.89■□□□□ 0.135e-7■■■■□ 20.8
SRSF1Q07955 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.135e-7■■■■□ 20.8
SRSF1Q07955 IKBKG-209ENST00000612051 1972 ntTSL 1 (best)15.2■□□□□ 0.025e-7■■■■□ 20.8
SRSF1Q07955 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC11.5□□□□□ -0.575e-7■■■■□ 20.8
SRSF1Q07955 IKBKG-202ENST00000422680 841 ntTSL 211.34□□□□□ -0.595e-7■■■■□ 20.8
SRSF1Q07955 IKBKG-213ENST00000617838 285 ntTSL 1 (best)9.49□□□□□ -0.895e-7■■■■□ 20.8
SRSF1Q07955 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.39■□□□□ 0.692e-7■■■■□ 20.8
SRSF1Q07955 AKAP8L-203ENST00000594594 2251 ntTSL 517.53■□□□□ 0.42e-7■■■■□ 20.8
SRSF1Q07955 AKAP8L-220ENST00000609519 2113 ntTSL 215.51■□□□□ 0.072e-7■■■■□ 20.8
SRSF1Q07955 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.022e-7■■■■□ 20.8
SRSF1Q07955 AKAP8L-202ENST00000593845 2749 ntTSL 213.58□□□□□ -0.242e-7■■■■□ 20.8
SRSF1Q07955 FDFT1-220ENST00000531733 712 ntTSL 220.86■□□□□ 0.935e-7■■■■□ 20.7
SRSF1Q07955 LONP1-214ENST00000591321 913 ntTSL 318.04■□□□□ 0.489e-7■■■■□ 20.7
SRSF1Q07955 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC12.54□□□□□ -0.44e-7■■■■□ 20.7
SRSF1Q07955 CARS-214ENST00000529772 2637 ntTSL 2 BASIC10.41□□□□□ -0.744e-7■■■■□ 20.7
SRSF1Q07955 CARS-201ENST00000278224 2491 ntTSL 1 (best) BASIC9.86□□□□□ -0.834e-7■■■■□ 20.7
SRSF1Q07955 CARS-202ENST00000380525 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.874e-7■■■■□ 20.7
SRSF1Q07955 CARS-212ENST00000526890 5732 ntTSL 29.3□□□□□ -0.924e-7■■■■□ 20.7
SRSF1Q07955 CARS-215ENST00000531387 2805 ntTSL 27.97□□□□□ -1.134e-7■■■■□ 20.7
SRSF1Q07955 PTMS-203ENST00000538057 976 ntTSL 220.53■□□□□ 0.887e-11■■■■□ 20.7
SRSF1Q07955 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.887e-11■■■■□ 20.7
SRSF1Q07955 PTMS-205ENST00000540828 644 ntTSL 1 (best)19.93■□□□□ 0.787e-11■■■■□ 20.7
SRSF1Q07955 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.537e-11■■■■□ 20.7
SRSF1Q07955 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.4■□□□□ 0.227e-11■■■■□ 20.7
SRSF1Q07955 PTMS-204ENST00000540667 820 ntTSL 214.79□□□□□ -0.047e-11■■■■□ 20.7
SRSF1Q07955 SAFB-206ENST00000589006 459 ntTSL 518.71■□□□□ 0.592e-7■■■■□ 20.7
Retrieved 100 of 14,836 protein–RNA pairs in 114.3 ms