RNA–Protein interactions for RNA: ENST00000263246.7

PACSIN2-201, Transcript of protein kinase C and casein kinase substrate in neurons 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN2, Length 3,249 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN2-201ENST00000263246 NISCHQ9Y2I1 1504 aa32.53■■■□□ 2.8
PACSIN2-201ENST00000263246 CCDC180Q9P1Z9 1646 aa27.76■■■□□ 2.03
PACSIN2-201ENST00000263246 ZCCHC6Q5VYS8 1495 aaKnown RBP27.5■■□□□ 1.99
PACSIN2-201ENST00000263246 SHROOM4Q9ULL8 1493 aa27.48■■□□□ 1.99
PACSIN2-201ENST00000263246 SUPT5HO00267 1087 aaKnown RBP26.89■■□□□ 1.89
PACSIN2-201ENST00000263246 DCAF8L2P0C7V8 631 aa26.83■■□□□ 1.89
PACSIN2-201ENST00000263246 DCAF1Q9Y4B6 1507 aa26.75■■□□□ 1.87
PACSIN2-201ENST00000263246 CHIC1Q5VXU3 224 aa26.17■■□□□ 1.78
PACSIN2-201ENST00000263246 MYO15BQ96JP2 1530 aa26.05■■□□□ 1.76
PACSIN2-201ENST00000263246 ABCC9O60706 1549 aa25.91■■□□□ 1.74
PACSIN2-201ENST00000263246 SCRIBQ14160 1630 aa25.9■■□□□ 1.74
PACSIN2-201ENST00000263246 NACADO15069 1562 aa25.68■■□□□ 1.7
PACSIN2-201ENST00000263246 RSF1Q96T23 1441 aaPredicted RBP25.67■■□□□ 1.7
PACSIN2-201ENST00000263246 RB1CC1Q8TDY2 1594 aa25.38■■□□□ 1.65
PACSIN2-201ENST00000263246 CECR2Q9BXF3 1484 aa25.35■■□□□ 1.65
PACSIN2-201ENST00000263246 LOC105371045A0A1W2PR82 267 aa25.33■■□□□ 1.65
PACSIN2-201ENST00000263246 MROH2BQ7Z745 1585 aa25.26■■□□□ 1.63
PACSIN2-201ENST00000263246 PCGF6Q9BYE7 350 aa25.14■■□□□ 1.61
PACSIN2-201ENST00000263246 HRCP23327 699 aa25.1■■□□□ 1.61
PACSIN2-201ENST00000263246 WIZO95785 1651 aa25.1■■□□□ 1.61
PACSIN2-201ENST00000263246 TRIM41Q8WV44 630 aa25.1■■□□□ 1.61
PACSIN2-201ENST00000263246 BAZ1AQ9NRL2 1556 aaPredicted RBP24.99■■□□□ 1.59
PACSIN2-201ENST00000263246 UNC13AQ9UPW8 1703 aa24.89■■□□□ 1.58
PACSIN2-201ENST00000263246 FAM9AQ8IZU1 332 aaPredicted RBP24.83■■□□□ 1.57
PACSIN2-201ENST00000263246 SMARCA4P51532 1647 aa24.8■■□□□ 1.56
PACSIN2-201ENST00000263246 EIF4G1Q04637 1599 aaKnown RBP24.77■■□□□ 1.56
PACSIN2-201ENST00000263246 TRIM26Q12899 539 aaPredicted RBP24.75■■□□□ 1.55
PACSIN2-201ENST00000263246 TOP2AP11388 1531 aaKnown RBP24.74■■□□□ 1.55
PACSIN2-201ENST00000263246 CCDC88BA6NC98 1476 aa24.62■■□□□ 1.53
PACSIN2-201ENST00000263246 BICRAQ9NZM4 1560 aa24.6■■□□□ 1.53
PACSIN2-201ENST00000263246 SMARCA2P51531 1590 aa24.6■■□□□ 1.53
PACSIN2-201ENST00000263246 EHMT2Q96KQ7 1210 aa24.55■■□□□ 1.52
PACSIN2-201ENST00000263246 PPARGC1BQ86YN6 1023 aaKnown RBP24.54■■□□□ 1.52
PACSIN2-201ENST00000263246 PABPN1Q86U42 306 aaKnown RBP eCLIP24.54■■□□□ 1.52
PACSIN2-201ENST00000263246 ABCC8Q09428 1581 aa24.47■■□□□ 1.51
PACSIN2-201ENST00000263246 PEG3Q9GZU2 1588 aa24.37■■□□□ 1.49
PACSIN2-201ENST00000263246 SOGA1O94964 1423 aa24.22■■□□□ 1.47
PACSIN2-201ENST00000263246 ATAD2BQ9ULI0 1458 aa24.19■■□□□ 1.46
PACSIN2-201ENST00000263246 ZEB1P37275 1124 aaPredicted RBP24.16■■□□□ 1.46
PACSIN2-201ENST00000263246 EEA1Q15075 1411 aa24.13■■□□□ 1.45
PACSIN2-201ENST00000263246 RUSC2Q8N2Y8 1516 aa24.11■■□□□ 1.45
PACSIN2-201ENST00000263246 WRNQ14191 1432 aaPredicted RBP eCLIP24.1■■□□□ 1.45
PACSIN2-201ENST00000263246 BAZ1BQ9UIG0 1483 aaKnown RBP24.09■■□□□ 1.45
PACSIN2-201ENST00000263246 CSRNP3Q8WYN3 585 aa24.08■■□□□ 1.44
PACSIN2-201ENST00000263246 TNIKQ9UKE5 1360 aa24.06■■□□□ 1.44
PACSIN2-201ENST00000263246 CEP162Q5TB80 1403 aa24.05■■□□□ 1.44
PACSIN2-201ENST00000263246 SYNJ1O43426 1573 aa24■■□□□ 1.43
PACSIN2-201ENST00000263246 GOLGA3Q08378 1498 aa23.93■■□□□ 1.42
PACSIN2-201ENST00000263246 UBTFP17480 764 aaKnown RBP23.91■■□□□ 1.42
PACSIN2-201ENST00000263246 CEP164Q9UPV0 1460 aa23.82■■□□□ 1.4
PACSIN2-201ENST00000263246 KIF21BO75037 1637 aa23.81■■□□□ 1.4
PACSIN2-201ENST00000263246 NCAPD3P42695 1498 aa23.77■■□□□ 1.4
PACSIN2-201ENST00000263246 HMGXB3Q12766 1538 aa23.75■■□□□ 1.39
PACSIN2-201ENST00000263246 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.74■■□□□ 1.39
PACSIN2-201ENST00000263246 TOP2BQ02880 1626 aa23.74■■□□□ 1.39
PACSIN2-201ENST00000263246 TTBK1Q5TCY1 1321 aaPredicted RBP23.74■■□□□ 1.39
PACSIN2-201ENST00000263246 CCER1Q8TC90 406 aaPredicted RBP23.67■■□□□ 1.38
PACSIN2-201ENST00000263246 BIVM-ERCC5R4GMW8 1640 aa23.67■■□□□ 1.38
PACSIN2-201ENST00000263246 RAPGEF2Q9Y4G8 1499 aa23.65■■□□□ 1.38
PACSIN2-201ENST00000263246 CLIP1P30622 1438 aa23.64■■□□□ 1.37
PACSIN2-201ENST00000263246 VPS8Q8N3P4 1428 aa23.53■■□□□ 1.36
PACSIN2-201ENST00000263246 CFTRP13569 1480 aa23.53■■□□□ 1.36
PACSIN2-201ENST00000263246 CUX1P39880 1505 aa23.53■■□□□ 1.36
PACSIN2-201ENST00000263246 PRXQ9BXM0 1461 aa23.48■■□□□ 1.35
PACSIN2-201ENST00000263246 ERICH3Q5RHP9 1530 aa23.46■■□□□ 1.35
PACSIN2-201ENST00000263246 RANGAP1P46060 587 aaPredicted RBP23.39■■□□□ 1.34
PACSIN2-201ENST00000263246 KIF27Q86VH2 1401 aa23.37■■□□□ 1.33
PACSIN2-201ENST00000263246 PRDM2Q13029 1718 aa23.34■■□□□ 1.33
PACSIN2-201ENST00000263246 APLP2Q06481 763 aa23.34■■□□□ 1.33
PACSIN2-201ENST00000263246 ARAP1Q96P48 1450 aa23.3■■□□□ 1.32
PACSIN2-201ENST00000263246 HNRNPUL2Q1KMD3 747 aaKnown RBP23.28■■□□□ 1.32
PACSIN2-201ENST00000263246 CADPSQ9ULU8 1353 aa23.28■■□□□ 1.32
PACSIN2-201ENST00000263246 CC2D2AQ9P2K1 1620 aa23.19■■□□□ 1.3
PACSIN2-201ENST00000263246 CUX2O14529 1486 aa23.16■■□□□ 1.3
PACSIN2-201ENST00000263246 IGF1RP08069 1367 aa23.15■■□□□ 1.3
PACSIN2-201ENST00000263246 DIEXFQ68CQ4 756 aaKnown RBP23.14■■□□□ 1.29
PACSIN2-201ENST00000263246 ARHGAP35Q9NRY4 1499 aa23.12■■□□□ 1.29
PACSIN2-201ENST00000263246 FGD5Q6ZNL6 1462 aa23.12■■□□□ 1.29
PACSIN2-201ENST00000263246 KANK4Q5T7N3 995 aaPredicted RBP23.11■■□□□ 1.29
PACSIN2-201ENST00000263246 ZNF316A6NFI3 1004 aaPredicted RBP23.04■■□□□ 1.28
PACSIN2-201ENST00000263246 FANCD2Q9BXW9 1451 aa23.03■■□□□ 1.28
PACSIN2-201ENST00000263246 CARMIL1Q5VZK9 1371 aa23.03■■□□□ 1.28
PACSIN2-201ENST00000263246 SCAF1Q9H7N4 1312 aaKnown RBP23■■□□□ 1.27
PACSIN2-201ENST00000263246 RRBP1Q9P2E9 1410 aaKnown RBP22.98■■□□□ 1.27
PACSIN2-201ENST00000263246 DNMBPQ6XZF7 1577 aa22.93■■□□□ 1.26
PACSIN2-201ENST00000263246 NESP48681 1621 aa22.9■■□□□ 1.26
PACSIN2-201ENST00000263246 DHX57Q6P158 1386 aaKnown RBP22.89■■□□□ 1.25
PACSIN2-201ENST00000263246 TOPBP1Q92547 1522 aa22.89■■□□□ 1.25
PACSIN2-201ENST00000263246 RAD54L2Q9Y4B4 1467 aa22.88■■□□□ 1.25
PACSIN2-201ENST00000263246 ABCA10Q8WWZ4 1543 aa22.87■■□□□ 1.25
PACSIN2-201ENST00000263246 CLSPNQ9HAW4 1339 aa22.87■■□□□ 1.25
PACSIN2-201ENST00000263246 CCNB3Q8WWL7 1395 aa22.87■■□□□ 1.25
PACSIN2-201ENST00000263246 POLA1P09884 1462 aaPredicted RBP22.87■■□□□ 1.25
PACSIN2-201ENST00000263246 ACIN1Q9UKV3 1341 aaKnown RBP22.86■■□□□ 1.25
PACSIN2-201ENST00000263246 MAP3K1Q13233 1512 aa22.86■■□□□ 1.25
PACSIN2-201ENST00000263246 TIAM1Q13009 1591 aa22.84■■□□□ 1.25
PACSIN2-201ENST00000263246 NEUROD1Q13562 356 aa22.83■■□□□ 1.25
PACSIN2-201ENST00000263246 FHAD1B1AJZ9 1412 aa22.76■■□□□ 1.23
PACSIN2-201ENST00000263246 LRRC9Q6ZRR7 1453 aa22.76■■□□□ 1.23
PACSIN2-201ENST00000263246 LAMC3Q9Y6N6 1575 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms