RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 NISCHQ9Y2I1 1504 aa36.41■■■■□ 3.42
FDPS-213ENST00000489003 CCDC180Q9P1Z9 1646 aa32.21■■■□□ 2.75
FDPS-213ENST00000489003 ABCC9O60706 1549 aa31.41■■■□□ 2.62
FDPS-213ENST00000489003 DCAF8L2P0C7V8 631 aa30.47■■■□□ 2.47
FDPS-213ENST00000489003 ZCCHC6Q5VYS8 1495 aaKnown RBP30.33■■■□□ 2.45
FDPS-213ENST00000489003 NACADO15069 1562 aa30.27■■■□□ 2.44
FDPS-213ENST00000489003 RB1CC1Q8TDY2 1594 aa30.24■■■□□ 2.43
FDPS-213ENST00000489003 MYO15BQ96JP2 1530 aa30.14■■■□□ 2.42
FDPS-213ENST00000489003 DCAF1Q9Y4B6 1507 aa30.1■■■□□ 2.41
FDPS-213ENST00000489003 UNC13AQ9UPW8 1703 aa29.61■■■□□ 2.33
FDPS-213ENST00000489003 PABPN1Q86U42 306 aaKnown RBP eCLIP29.46■■■□□ 2.316e-8■□□□□ 8.9
FDPS-213ENST00000489003 SCRIBQ14160 1630 aa29.44■■■□□ 2.3
FDPS-213ENST00000489003 BICRAQ9NZM4 1560 aa29.37■■■□□ 2.29
FDPS-213ENST00000489003 SHROOM4Q9ULL8 1493 aa28.97■■■□□ 2.23
FDPS-213ENST00000489003 DNAJC5BQ9UF47 199 aa28.77■■■□□ 2.2
FDPS-213ENST00000489003 EIF4G1Q04637 1599 aaKnown RBP28.55■■■□□ 2.16
FDPS-213ENST00000489003 CC2D2AQ9P2K1 1620 aa28.4■■■□□ 2.14
FDPS-213ENST00000489003 CECR2Q9BXF3 1484 aa28.39■■■□□ 2.13
FDPS-213ENST00000489003 SMARCA4P51532 1647 aa28.18■■■□□ 2.1
FDPS-213ENST00000489003 BAZ1AQ9NRL2 1556 aaPredicted RBP28.16■■■□□ 2.1
FDPS-213ENST00000489003 MROH2BQ7Z745 1585 aa28.08■■■□□ 2.09
FDPS-213ENST00000489003 ATAD2BQ9ULI0 1458 aa28.02■■■□□ 2.08
FDPS-213ENST00000489003 NCAPD3P42695 1498 aa27.97■■■□□ 2.07
FDPS-213ENST00000489003 SMARCA2P51531 1590 aa27.94■■■□□ 2.06
FDPS-213ENST00000489003 PEG3Q9GZU2 1588 aa27.89■■■□□ 2.05
FDPS-213ENST00000489003 RSF1Q96T23 1441 aaPredicted RBP27.84■■■□□ 2.05
FDPS-213ENST00000489003 WIZO95785 1651 aa27.78■■■□□ 2.04
FDPS-213ENST00000489003 HMGXB3Q12766 1538 aa27.77■■■□□ 2.04
FDPS-213ENST00000489003 BAZ1BQ9UIG0 1483 aaKnown RBP27.76■■■□□ 2.03
FDPS-213ENST00000489003 TOP2AP11388 1531 aaKnown RBP27.45■■□□□ 1.98
FDPS-213ENST00000489003 SUPT5HO00267 1087 aaKnown RBP27.36■■□□□ 1.97
FDPS-213ENST00000489003 NESP48681 1621 aa27.25■■□□□ 1.95
FDPS-213ENST00000489003 CCDC88BA6NC98 1476 aa27.2■■□□□ 1.95
FDPS-213ENST00000489003 CADPSQ9ULU8 1353 aa27.18■■□□□ 1.94
FDPS-213ENST00000489003 LAMC3Q9Y6N6 1575 aa27.15■■□□□ 1.94
FDPS-213ENST00000489003 CFTRP13569 1480 aa27.03■■□□□ 1.92
FDPS-213ENST00000489003 ERCC6Q03468 1493 aa27■■□□□ 1.91
FDPS-213ENST00000489003 PDS5BQ9NTI5 1447 aa26.99■■□□□ 1.91
FDPS-213ENST00000489003 KIF21AQ7Z4S6 1674 aa26.89■■□□□ 1.9
FDPS-213ENST00000489003 FANCD2Q9BXW9 1451 aa26.82■■□□□ 1.88
FDPS-213ENST00000489003 PRDM2Q13029 1718 aa26.79■■□□□ 1.88
FDPS-213ENST00000489003 CEP164Q9UPV0 1460 aa26.75■■□□□ 1.87
FDPS-213ENST00000489003 THOC2Q8NI27 1593 aaKnown RBP26.72■■□□□ 1.87
FDPS-213ENST00000489003 MRC2Q9UBG0 1479 aa26.68■■□□□ 1.86
FDPS-213ENST00000489003 CUX2O14529 1486 aa26.63■■□□□ 1.85
FDPS-213ENST00000489003 WDR62O43379 1518 aa26.57■■□□□ 1.84
FDPS-213ENST00000489003 URB2Q14146 1524 aaKnown RBP26.56■■□□□ 1.84
FDPS-213ENST00000489003 ABCC8Q09428 1581 aa26.44■■□□□ 1.82
FDPS-213ENST00000489003 TOPBP1Q92547 1522 aa26.43■■□□□ 1.82
FDPS-213ENST00000489003 DNMBPQ6XZF7 1577 aa26.39■■□□□ 1.82
FDPS-213ENST00000489003 CUX1P39880 1505 aa26.31■■□□□ 1.8
FDPS-213ENST00000489003 WRNQ14191 1432 aaPredicted RBP eCLIP26.22■■□□□ 1.79
FDPS-213ENST00000489003 POLA1P09884 1462 aaPredicted RBP26.21■■□□□ 1.79
FDPS-213ENST00000489003 IFT140Q96RY7 1462 aa26.21■■□□□ 1.79
FDPS-213ENST00000489003 FGD5Q6ZNL6 1462 aa26.18■■□□□ 1.78
FDPS-213ENST00000489003 SOGA1O94964 1423 aa26.16■■□□□ 1.78
FDPS-213ENST00000489003 RAD54L2Q9Y4B4 1467 aa26.15■■□□□ 1.78
FDPS-213ENST00000489003 SYNJ1O43426 1573 aa26.13■■□□□ 1.77
FDPS-213ENST00000489003 TARBP1Q13395 1621 aaKnown RBP26.12■■□□□ 1.77
FDPS-213ENST00000489003 TOP2BQ02880 1626 aa26.11■■□□□ 1.77
FDPS-213ENST00000489003 BIVM-ERCC5R4GMW8 1640 aa26.11■■□□□ 1.77
FDPS-213ENST00000489003 ZNF608Q9ULD9 1512 aaPredicted RBP26.11■■□□□ 1.77
FDPS-213ENST00000489003 AQRO60306 1485 aaKnown RBP eCLIP26.01■■□□□ 1.757e-9■■■■□ 23.5
FDPS-213ENST00000489003 TDRD9Q8NDG6 1382 aaKnown RBP26■■□□□ 1.75
FDPS-213ENST00000489003 ABCA10Q8WWZ4 1543 aa25.94■■□□□ 1.74
FDPS-213ENST00000489003 EIF4G3O43432 1585 aaKnown RBP25.94■■□□□ 1.74
FDPS-213ENST00000489003 WDR97A6NE52 1622 aa25.92■■□□□ 1.74
FDPS-213ENST00000489003 TRIM41Q8WV44 630 aa25.83■■□□□ 1.73
FDPS-213ENST00000489003 GAPVD1Q14C86 1478 aa25.83■■□□□ 1.73
FDPS-213ENST00000489003 ABCA5Q8WWZ7 1642 aa25.78■■□□□ 1.72
FDPS-213ENST00000489003 GRIN2BQ13224 1484 aa25.78■■□□□ 1.72
FDPS-213ENST00000489003 DNAJC5Q9H3Z4 198 aa25.72■■□□□ 1.71
FDPS-213ENST00000489003 PBRM1Q86U86 1689 aa25.71■■□□□ 1.71
FDPS-213ENST00000489003 SNAPC4Q5SXM2 1469 aa25.71■■□□□ 1.71
FDPS-213ENST00000489003 OSCARQ8IYS5 282 aa25.69■■□□□ 1.7
FDPS-213ENST00000489003 FBLN2P98095 1184 aa25.68■■□□□ 1.7
FDPS-213ENST00000489003 CHIC1Q5VXU3 224 aa25.67■■□□□ 1.7
FDPS-213ENST00000489003 MAGI1Q96QZ7 1491 aaPredicted RBP25.66■■□□□ 1.7
FDPS-213ENST00000489003 KIF27Q86VH2 1401 aa25.66■■□□□ 1.7
FDPS-213ENST00000489003 CHMP7Q8WUX9 453 aaPredicted RBP25.64■■□□□ 1.7
FDPS-213ENST00000489003 CHD1O14646 1710 aa25.61■■□□□ 1.69
FDPS-213ENST00000489003 ERICH3Q5RHP9 1530 aa25.61■■□□□ 1.69
FDPS-213ENST00000489003 IGF1RP08069 1367 aa25.59■■□□□ 1.69
FDPS-213ENST00000489003 SYNJ2O15056 1496 aa25.58■■□□□ 1.69
FDPS-213ENST00000489003 RUSC2Q8N2Y8 1516 aa25.56■■□□□ 1.68
FDPS-213ENST00000489003 FHAD1B1AJZ9 1412 aa25.53■■□□□ 1.68
FDPS-213ENST00000489003 ADAMTS12P58397 1594 aa25.51■■□□□ 1.67
FDPS-213ENST00000489003 GRIN2AQ12879 1464 aa25.44■■□□□ 1.66
FDPS-213ENST00000489003 CARMIL1Q5VZK9 1371 aa25.43■■□□□ 1.66
FDPS-213ENST00000489003 CUL7Q14999 1698 aa25.39■■□□□ 1.65
FDPS-213ENST00000489003 NUP160Q12769 1436 aa25.33■■□□□ 1.65
FDPS-213ENST00000489003 CSRNP3Q8WYN3 585 aa25.33■■□□□ 1.65
FDPS-213ENST00000489003 CLASP1Q7Z460 1538 aa25.32■■□□□ 1.64
FDPS-213ENST00000489003 CEP170Q5SW79 1584 aa25.31■■□□□ 1.64
FDPS-213ENST00000489003 FAM9AQ8IZU1 332 aaPredicted RBP25.3■■□□□ 1.64
FDPS-213ENST00000489003 EEA1Q15075 1411 aa25.27■■□□□ 1.64
FDPS-213ENST00000489003 RAPGEF2Q9Y4G8 1499 aa25.26■■□□□ 1.63
FDPS-213ENST00000489003 PRXQ9BXM0 1461 aa25.22■■□□□ 1.63
FDPS-213ENST00000489003 JPH4Q96JJ6 628 aa25.18■■□□□ 1.62
FDPS-213ENST00000489003 ARHGEF11O15085 1522 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms