RNA–Protein interactions for RNA: ENST00000536265.5

DDX11-208, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 3,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-208ENST00000536265 NISCHQ9Y2I1 1504 aa24.33■■□□□ 1.49
DDX11-208ENST00000536265 DCAF8L2P0C7V8 631 aa20.9■□□□□ 0.94
DDX11-208ENST00000536265 CCDC180Q9P1Z9 1646 aa20.78■□□□□ 0.92
DDX11-208ENST00000536265 SHROOM4Q9ULL8 1493 aa20.74■□□□□ 0.91
DDX11-208ENST00000536265 ZCCHC6Q5VYS8 1495 aaKnown RBP20.44■□□□□ 0.86
DDX11-208ENST00000536265 SUPT5HO00267 1087 aaKnown RBP20.26■□□□□ 0.83
DDX11-208ENST00000536265 ABCC9O60706 1549 aa19.91■□□□□ 0.78
DDX11-208ENST00000536265 DCAF1Q9Y4B6 1507 aa19.88■□□□□ 0.77
DDX11-208ENST00000536265 SCRIBQ14160 1630 aa19.56■□□□□ 0.72
DDX11-208ENST00000536265 MYO15BQ96JP2 1530 aa19.47■□□□□ 0.71
DDX11-208ENST00000536265 NACADO15069 1562 aa19.46■□□□□ 0.71
DDX11-208ENST00000536265 RB1CC1Q8TDY2 1594 aa19.28■□□□□ 0.68
DDX11-208ENST00000536265 CHIC1Q5VXU3 224 aa19.27■□□□□ 0.67
DDX11-208ENST00000536265 RSF1Q96T23 1441 aaPredicted RBP19.13■□□□□ 0.65
DDX11-208ENST00000536265 PABPN1Q86U42 306 aaKnown RBP eCLIP19.05■□□□□ 0.64
DDX11-208ENST00000536265 CECR2Q9BXF3 1484 aa19.01■□□□□ 0.63
DDX11-208ENST00000536265 TRIM41Q8WV44 630 aa18.91■□□□□ 0.62
DDX11-208ENST00000536265 MROH2BQ7Z745 1585 aa18.88■□□□□ 0.61
DDX11-208ENST00000536265 BAZ1AQ9NRL2 1556 aaPredicted RBP18.79■□□□□ 0.6
DDX11-208ENST00000536265 FAM9AQ8IZU1 332 aaPredicted RBP18.79■□□□□ 0.6
DDX11-208ENST00000536265 LOC105371045A0A1W2PR82 267 aa18.73■□□□□ 0.59
DDX11-208ENST00000536265 WIZO95785 1651 aa18.71■□□□□ 0.59
DDX11-208ENST00000536265 EHMT2Q96KQ7 1210 aa18.69■□□□□ 0.58
DDX11-208ENST00000536265 UNC13AQ9UPW8 1703 aa18.61■□□□□ 0.57
DDX11-208ENST00000536265 SMARCA4P51532 1647 aa18.58■□□□□ 0.57
DDX11-208ENST00000536265 BICRAQ9NZM4 1560 aa18.52■□□□□ 0.55
DDX11-208ENST00000536265 TOP2AP11388 1531 aaKnown RBP18.47■□□□□ 0.55
DDX11-208ENST00000536265 CCDC88BA6NC98 1476 aa18.42■□□□□ 0.54
DDX11-208ENST00000536265 PCGF6Q9BYE7 350 aa18.42■□□□□ 0.54
DDX11-208ENST00000536265 BAZ1BQ9UIG0 1483 aaKnown RBP18.34■□□□□ 0.53
DDX11-208ENST00000536265 SMARCA2P51531 1590 aa18.3■□□□□ 0.52
DDX11-208ENST00000536265 ATAD2BQ9ULI0 1458 aa18.29■□□□□ 0.52
DDX11-208ENST00000536265 ABCC8Q09428 1581 aa18.22■□□□□ 0.51
DDX11-208ENST00000536265 UBTFP17480 764 aaKnown RBP18.17■□□□□ 0.5
DDX11-208ENST00000536265 PEG3Q9GZU2 1588 aa18.13■□□□□ 0.49
DDX11-208ENST00000536265 TRIM26Q12899 539 aaPredicted RBP18.12■□□□□ 0.49
DDX11-208ENST00000536265 WRNQ14191 1432 aaPredicted RBP eCLIP18.11■□□□□ 0.49
DDX11-208ENST00000536265 CSRNP3Q8WYN3 585 aa18.09■□□□□ 0.49
DDX11-208ENST00000536265 EIF4G1Q04637 1599 aaKnown RBP18.09■□□□□ 0.49
DDX11-208ENST00000536265 PPARGC1BQ86YN6 1023 aaKnown RBP18.05■□□□□ 0.48
DDX11-208ENST00000536265 SOGA1O94964 1423 aa18.02■□□□□ 0.48
DDX11-208ENST00000536265 NCAPD3P42695 1498 aa18.01■□□□□ 0.47
DDX11-208ENST00000536265 TTBK1Q5TCY1 1321 aaPredicted RBP17.98■□□□□ 0.47
DDX11-208ENST00000536265 HRCP23327 699 aa17.97■□□□□ 0.47
DDX11-208ENST00000536265 RANGAP1P46060 587 aaPredicted RBP17.97■□□□□ 0.47
DDX11-208ENST00000536265 EEA1Q15075 1411 aa17.96■□□□□ 0.47
DDX11-208ENST00000536265 HMGXB3Q12766 1538 aa17.91■□□□□ 0.46
DDX11-208ENST00000536265 RUSC2Q8N2Y8 1516 aa17.88■□□□□ 0.45
DDX11-208ENST00000536265 APLP2Q06481 763 aa17.82■□□□□ 0.44
DDX11-208ENST00000536265 SYNJ1O43426 1573 aa17.82■□□□□ 0.44
DDX11-208ENST00000536265 GOLGA3Q08378 1498 aa17.81■□□□□ 0.44
DDX11-208ENST00000536265 TNIKQ9UKE5 1360 aa17.81■□□□□ 0.44
DDX11-208ENST00000536265 CEP162Q5TB80 1403 aa17.81■□□□□ 0.44
DDX11-208ENST00000536265 CC2D2AQ9P2K1 1620 aa17.75■□□□□ 0.43
DDX11-208ENST00000536265 CEP164Q9UPV0 1460 aa17.75■□□□□ 0.43
DDX11-208ENST00000536265 CADPSQ9ULU8 1353 aa17.75■□□□□ 0.43
DDX11-208ENST00000536265 CFTRP13569 1480 aa17.73■□□□□ 0.43
DDX11-208ENST00000536265 KIF27Q86VH2 1401 aa17.66■□□□□ 0.42
DDX11-208ENST00000536265 TOP2BQ02880 1626 aa17.65■□□□□ 0.42
DDX11-208ENST00000536265 ZEB1P37275 1124 aaPredicted RBP17.65■□□□□ 0.42
DDX11-208ENST00000536265 CLIP1P30622 1438 aa17.64■□□□□ 0.41
DDX11-208ENST00000536265 CUX1P39880 1505 aa17.6■□□□□ 0.41
DDX11-208ENST00000536265 RAPGEF2Q9Y4G8 1499 aa17.59■□□□□ 0.41
DDX11-208ENST00000536265 CCER1Q8TC90 406 aaPredicted RBP17.59■□□□□ 0.41
DDX11-208ENST00000536265 CUX2O14529 1486 aa17.55■□□□□ 0.4
DDX11-208ENST00000536265 FANCD2Q9BXW9 1451 aa17.55■□□□□ 0.4
DDX11-208ENST00000536265 KIF21BO75037 1637 aa17.53■□□□□ 0.4
DDX11-208ENST00000536265 BIVM-ERCC5R4GMW8 1640 aa17.52■□□□□ 0.4
DDX11-208ENST00000536265 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.51■□□□□ 0.39
DDX11-208ENST00000536265 NESP48681 1621 aa17.48■□□□□ 0.39
DDX11-208ENST00000536265 ATP1B4Q9UN42 357 aaPredicted RBP17.47■□□□□ 0.39
DDX11-208ENST00000536265 FGD5Q6ZNL6 1462 aa17.46■□□□□ 0.39
DDX11-208ENST00000536265 HNRNPUL2Q1KMD3 747 aaKnown RBP17.45■□□□□ 0.38
DDX11-208ENST00000536265 DNAJC5BQ9UF47 199 aa17.44■□□□□ 0.38
DDX11-208ENST00000536265 VPS8Q8N3P4 1428 aa17.43■□□□□ 0.38
DDX11-208ENST00000536265 CARMIL1Q5VZK9 1371 aa17.42■□□□□ 0.38
DDX11-208ENST00000536265 PRXQ9BXM0 1461 aa17.42■□□□□ 0.38
DDX11-208ENST00000536265 PDS5BQ9NTI5 1447 aa17.41■□□□□ 0.38
DDX11-208ENST00000536265 IGF1RP08069 1367 aa17.39■□□□□ 0.37
DDX11-208ENST00000536265 P3H3Q8IVL6 736 aa17.37■□□□□ 0.37
DDX11-208ENST00000536265 ERICH3Q5RHP9 1530 aa17.37■□□□□ 0.37
DDX11-208ENST00000536265 RAD54L2Q9Y4B4 1467 aa17.35■□□□□ 0.37
DDX11-208ENST00000536265 PRDM2Q13029 1718 aa17.33■□□□□ 0.37
DDX11-208ENST00000536265 TOPBP1Q92547 1522 aa17.32■□□□□ 0.36
DDX11-208ENST00000536265 LAMC3Q9Y6N6 1575 aa17.3■□□□□ 0.36
DDX11-208ENST00000536265 DNMBPQ6XZF7 1577 aa17.29■□□□□ 0.36
DDX11-208ENST00000536265 TDRD9Q8NDG6 1382 aaKnown RBP17.29■□□□□ 0.36
DDX11-208ENST00000536265 POLA1P09884 1462 aaPredicted RBP17.28■□□□□ 0.36
DDX11-208ENST00000536265 ITGAEP38570 1179 aa17.25■□□□□ 0.35
DDX11-208ENST00000536265 KANK4Q5T7N3 995 aaPredicted RBP17.2■□□□□ 0.34
DDX11-208ENST00000536265 ARAP1Q96P48 1450 aa17.2■□□□□ 0.34
DDX11-208ENST00000536265 URB2Q14146 1524 aaKnown RBP17.19■□□□□ 0.34
DDX11-208ENST00000536265 ABCA10Q8WWZ4 1543 aa17.19■□□□□ 0.34
DDX11-208ENST00000536265 ARHGAP35Q9NRY4 1499 aa17.16■□□□□ 0.34
DDX11-208ENST00000536265 GAPVD1Q14C86 1478 aa17.14■□□□□ 0.33
DDX11-208ENST00000536265 ERCC6Q03468 1493 aa17.13■□□□□ 0.33
DDX11-208ENST00000536265 FHAD1B1AJZ9 1412 aa17.1■□□□□ 0.33
DDX11-208ENST00000536265 FAM50AQ14320 339 aaKnown RBP17.1■□□□□ 0.33
DDX11-208ENST00000536265 FHOD3Q2V2M9 1422 aa17.07■□□□□ 0.32
DDX11-208ENST00000536265 FBLN2P98095 1184 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms