RNA–Protein interactions for RNA: ENST00000409643.5

PSMD1-203, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 5 BASIC

Gene PSMD1, Length 2,901 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-203ENST00000409643 NISCHQ9Y2I1 1504 aa23.56■■□□□ 1.36
PSMD1-203ENST00000409643 CCDC180Q9P1Z9 1646 aa20.27■□□□□ 0.84
PSMD1-203ENST00000409643 ZCCHC6Q5VYS8 1495 aaKnown RBP19.93■□□□□ 0.78
PSMD1-203ENST00000409643 SHROOM4Q9ULL8 1493 aa19.63■□□□□ 0.73
PSMD1-203ENST00000409643 DCAF1Q9Y4B6 1507 aa19.52■□□□□ 0.71
PSMD1-203ENST00000409643 SUPT5HO00267 1087 aaKnown RBP19.23■□□□□ 0.67
PSMD1-203ENST00000409643 DCAF8L2P0C7V8 631 aa19.2■□□□□ 0.66
PSMD1-203ENST00000409643 MYO15BQ96JP2 1530 aa19.05■□□□□ 0.64
PSMD1-203ENST00000409643 ABCC9O60706 1549 aa18.79■□□□□ 0.6
PSMD1-203ENST00000409643 CHIC1Q5VXU3 224 aa18.77■□□□□ 0.59
PSMD1-203ENST00000409643 NACADO15069 1562 aa18.72■□□□□ 0.59
PSMD1-203ENST00000409643 SCRIBQ14160 1630 aa18.69■□□□□ 0.58
PSMD1-203ENST00000409643 RSF1Q96T23 1441 aaPredicted RBP18.52■□□□□ 0.55
PSMD1-203ENST00000409643 RB1CC1Q8TDY2 1594 aa18.4■□□□□ 0.54
PSMD1-203ENST00000409643 CECR2Q9BXF3 1484 aa18.22■□□□□ 0.51
PSMD1-203ENST00000409643 MROH2BQ7Z745 1585 aa18.21■□□□□ 0.51
PSMD1-203ENST00000409643 BAZ1AQ9NRL2 1556 aaPredicted RBP18.16■□□□□ 0.5
PSMD1-203ENST00000409643 WIZO95785 1651 aa18.1■□□□□ 0.49
PSMD1-203ENST00000409643 TRIM41Q8WV44 630 aa18.06■□□□□ 0.48
PSMD1-203ENST00000409643 LOC105371045A0A1W2PR82 267 aa18.04■□□□□ 0.48
PSMD1-203ENST00000409643 UNC13AQ9UPW8 1703 aa18.04■□□□□ 0.48
PSMD1-203ENST00000409643 HRCP23327 699 aa17.99■□□□□ 0.47
PSMD1-203ENST00000409643 SMARCA4P51532 1647 aa17.98■□□□□ 0.47
PSMD1-203ENST00000409643 TOP2AP11388 1531 aaKnown RBP17.96■□□□□ 0.46
PSMD1-203ENST00000409643 PCGF6Q9BYE7 350 aa17.94■□□□□ 0.46
PSMD1-203ENST00000409643 EIF4G1Q04637 1599 aaKnown RBP17.92■□□□□ 0.46
PSMD1-203ENST00000409643 TRIM26Q12899 539 aaPredicted RBP17.82■□□□□ 0.44
PSMD1-203ENST00000409643 BICRAQ9NZM4 1560 aa17.8■□□□□ 0.44
PSMD1-203ENST00000409643 SMARCA2P51531 1590 aa17.8■□□□□ 0.44
PSMD1-203ENST00000409643 CCDC88BA6NC98 1476 aa17.76■□□□□ 0.43
PSMD1-203ENST00000409643 PEG3Q9GZU2 1588 aa17.75■□□□□ 0.43
PSMD1-203ENST00000409643 FAM9AQ8IZU1 332 aaPredicted RBP17.71■□□□□ 0.43
PSMD1-203ENST00000409643 ABCC8Q09428 1581 aa17.58■□□□□ 0.41
PSMD1-203ENST00000409643 PABPN1Q86U42 306 aaKnown RBP eCLIP17.58■□□□□ 0.4
PSMD1-203ENST00000409643 EEA1Q15075 1411 aa17.57■□□□□ 0.4
PSMD1-203ENST00000409643 ATAD2BQ9ULI0 1458 aa17.51■□□□□ 0.39
PSMD1-203ENST00000409643 ZEB1P37275 1124 aaPredicted RBP17.5■□□□□ 0.39
PSMD1-203ENST00000409643 BAZ1BQ9UIG0 1483 aaKnown RBP17.46■□□□□ 0.39
PSMD1-203ENST00000409643 WRNQ14191 1432 aaPredicted RBP eCLIP17.43■□□□□ 0.38
PSMD1-203ENST00000409643 EHMT2Q96KQ7 1210 aa17.4■□□□□ 0.38
PSMD1-203ENST00000409643 TNIKQ9UKE5 1360 aa17.4■□□□□ 0.38
PSMD1-203ENST00000409643 SOGA1O94964 1423 aa17.39■□□□□ 0.37
PSMD1-203ENST00000409643 PPARGC1BQ86YN6 1023 aaKnown RBP17.39■□□□□ 0.37
PSMD1-203ENST00000409643 CSRNP3Q8WYN3 585 aa17.36■□□□□ 0.37
PSMD1-203ENST00000409643 CEP162Q5TB80 1403 aa17.34■□□□□ 0.37
PSMD1-203ENST00000409643 GOLGA3Q08378 1498 aa17.33■□□□□ 0.36
PSMD1-203ENST00000409643 SYNJ1O43426 1573 aa17.31■□□□□ 0.36
PSMD1-203ENST00000409643 HMGXB3Q12766 1538 aa17.31■□□□□ 0.36
PSMD1-203ENST00000409643 KIF21BO75037 1637 aa17.29■□□□□ 0.36
PSMD1-203ENST00000409643 RUSC2Q8N2Y8 1516 aa17.27■□□□□ 0.36
PSMD1-203ENST00000409643 CEP164Q9UPV0 1460 aa17.26■□□□□ 0.35
PSMD1-203ENST00000409643 NCAPD3P42695 1498 aa17.26■□□□□ 0.35
PSMD1-203ENST00000409643 TOP2BQ02880 1626 aa17.22■□□□□ 0.35
PSMD1-203ENST00000409643 BIVM-ERCC5R4GMW8 1640 aa17.19■□□□□ 0.34
PSMD1-203ENST00000409643 UBTFP17480 764 aaKnown RBP17.19■□□□□ 0.34
PSMD1-203ENST00000409643 CFTRP13569 1480 aa17.06■□□□□ 0.32
PSMD1-203ENST00000409643 CLIP1P30622 1438 aa17.06■□□□□ 0.32
PSMD1-203ENST00000409643 ERICH3Q5RHP9 1530 aa17.05■□□□□ 0.32
PSMD1-203ENST00000409643 PRDM2Q13029 1718 aa17.04■□□□□ 0.32
PSMD1-203ENST00000409643 RAPGEF2Q9Y4G8 1499 aa17.02■□□□□ 0.32
PSMD1-203ENST00000409643 VPS8Q8N3P4 1428 aa17.02■□□□□ 0.31
PSMD1-203ENST00000409643 CCER1Q8TC90 406 aaPredicted RBP16.99■□□□□ 0.31
PSMD1-203ENST00000409643 CUX1P39880 1505 aa16.99■□□□□ 0.31
PSMD1-203ENST00000409643 PRXQ9BXM0 1461 aa16.98■□□□□ 0.31
PSMD1-203ENST00000409643 KIF27Q86VH2 1401 aa16.94■□□□□ 0.3
PSMD1-203ENST00000409643 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.94■□□□□ 0.3
PSMD1-203ENST00000409643 APLP2Q06481 763 aa16.88■□□□□ 0.29
PSMD1-203ENST00000409643 CADPSQ9ULU8 1353 aa16.86■□□□□ 0.29
PSMD1-203ENST00000409643 TTBK1Q5TCY1 1321 aaPredicted RBP16.85■□□□□ 0.29
PSMD1-203ENST00000409643 CC2D2AQ9P2K1 1620 aa16.8■□□□□ 0.28
PSMD1-203ENST00000409643 ARAP1Q96P48 1450 aa16.79■□□□□ 0.28
PSMD1-203ENST00000409643 CUX2O14529 1486 aa16.73■□□□□ 0.27
PSMD1-203ENST00000409643 FGD5Q6ZNL6 1462 aa16.71■□□□□ 0.27
PSMD1-203ENST00000409643 IGF1RP08069 1367 aa16.69■□□□□ 0.26
PSMD1-203ENST00000409643 ARHGAP35Q9NRY4 1499 aa16.68■□□□□ 0.26
PSMD1-203ENST00000409643 FANCD2Q9BXW9 1451 aa16.67■□□□□ 0.26
PSMD1-203ENST00000409643 DNMBPQ6XZF7 1577 aa16.66■□□□□ 0.26
PSMD1-203ENST00000409643 RANGAP1P46060 587 aaPredicted RBP16.66■□□□□ 0.26
PSMD1-203ENST00000409643 HNRNPUL2Q1KMD3 747 aaKnown RBP16.65■□□□□ 0.26
PSMD1-203ENST00000409643 MAP3K1Q13233 1512 aa16.64■□□□□ 0.25
PSMD1-203ENST00000409643 CARMIL1Q5VZK9 1371 aa16.63■□□□□ 0.25
PSMD1-203ENST00000409643 RRBP1Q9P2E9 1410 aaKnown RBP16.62■□□□□ 0.25
PSMD1-203ENST00000409643 CLSPNQ9HAW4 1339 aa16.61■□□□□ 0.25
PSMD1-203ENST00000409643 DIEXFQ68CQ4 756 aaKnown RBP16.59■□□□□ 0.25
PSMD1-203ENST00000409643 ABCA10Q8WWZ4 1543 aa16.59■□□□□ 0.25
PSMD1-203ENST00000409643 LAMC3Q9Y6N6 1575 aa16.58■□□□□ 0.24
PSMD1-203ENST00000409643 TOPBP1Q92547 1522 aa16.57■□□□□ 0.24
PSMD1-203ENST00000409643 ZNF316A6NFI3 1004 aaPredicted RBP16.56■□□□□ 0.24
PSMD1-203ENST00000409643 CUL7Q14999 1698 aa16.55■□□□□ 0.24
PSMD1-203ENST00000409643 KANK4Q5T7N3 995 aaPredicted RBP16.54■□□□□ 0.24
PSMD1-203ENST00000409643 FHAD1B1AJZ9 1412 aa16.54■□□□□ 0.24
PSMD1-203ENST00000409643 POLA1P09884 1462 aaPredicted RBP16.53■□□□□ 0.24
PSMD1-203ENST00000409643 TIAM1Q13009 1591 aa16.53■□□□□ 0.24
PSMD1-203ENST00000409643 EFCAB5A4FU69 1503 aa16.51■□□□□ 0.23
PSMD1-203ENST00000409643 CCNB3Q8WWL7 1395 aa16.5■□□□□ 0.23
PSMD1-203ENST00000409643 WDR97A6NE52 1622 aa16.48■□□□□ 0.23
PSMD1-203ENST00000409643 CFAP43Q8NDM7 1665 aa16.47■□□□□ 0.23
PSMD1-203ENST00000409643 DHX57Q6P158 1386 aaKnown RBP16.47■□□□□ 0.23
PSMD1-203ENST00000409643 RAD54L2Q9Y4B4 1467 aa16.46■□□□□ 0.23
PSMD1-203ENST00000409643 NESP48681 1621 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms