RNA–Protein interactions for RNA: ENST00000542129.5

DDX11-218, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 1,561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-218ENST00000542129 NISCHQ9Y2I1 1504 aa38.78■■■■□ 3.8
DDX11-218ENST00000542129 CCDC180Q9P1Z9 1646 aa34.03■■■■□ 3.04
DDX11-218ENST00000542129 ZCCHC6Q5VYS8 1495 aaKnown RBP32.51■■■□□ 2.79
DDX11-218ENST00000542129 ABCC9O60706 1549 aa32.5■■■□□ 2.79
DDX11-218ENST00000542129 DCAF8L2P0C7V8 631 aa32.13■■■□□ 2.73
DDX11-218ENST00000542129 DCAF1Q9Y4B6 1507 aa32.04■■■□□ 2.72
DDX11-218ENST00000542129 MYO15BQ96JP2 1530 aa31.79■■■□□ 2.68
DDX11-218ENST00000542129 NACADO15069 1562 aa31.74■■■□□ 2.67
DDX11-218ENST00000542129 RB1CC1Q8TDY2 1594 aa31.57■■■□□ 2.64
DDX11-218ENST00000542129 SHROOM4Q9ULL8 1493 aa31.4■■■□□ 2.62
DDX11-218ENST00000542129 SCRIBQ14160 1630 aa31.26■■■□□ 2.59
DDX11-218ENST00000542129 UNC13AQ9UPW8 1703 aa31■■■□□ 2.55
DDX11-218ENST00000542129 BICRAQ9NZM4 1560 aa30.65■■■□□ 2.5
DDX11-218ENST00000542129 PABPN1Q86U42 306 aaKnown RBP eCLIP30.55■■■□□ 2.48
DDX11-218ENST00000542129 CECR2Q9BXF3 1484 aa30.18■■■□□ 2.42
DDX11-218ENST00000542129 SUPT5HO00267 1087 aaKnown RBP29.99■■■□□ 2.39
DDX11-218ENST00000542129 BAZ1AQ9NRL2 1556 aaPredicted RBP29.97■■■□□ 2.39
DDX11-218ENST00000542129 MROH2BQ7Z745 1585 aa29.97■■■□□ 2.39
DDX11-218ENST00000542129 RSF1Q96T23 1441 aaPredicted RBP29.93■■■□□ 2.38
DDX11-218ENST00000542129 SMARCA4P51532 1647 aa29.92■■■□□ 2.38
DDX11-218ENST00000542129 EIF4G1Q04637 1599 aaKnown RBP29.75■■■□□ 2.35
DDX11-218ENST00000542129 WIZO95785 1651 aa29.73■■■□□ 2.35
DDX11-218ENST00000542129 PEG3Q9GZU2 1588 aa29.54■■■□□ 2.32
DDX11-218ENST00000542129 ATAD2BQ9ULI0 1458 aa29.49■■■□□ 2.31
DDX11-218ENST00000542129 SMARCA2P51531 1590 aa29.47■■■□□ 2.31
DDX11-218ENST00000542129 CC2D2AQ9P2K1 1620 aa29.42■■■□□ 2.3
DDX11-218ENST00000542129 TOP2AP11388 1531 aaKnown RBP29.39■■■□□ 2.29
DDX11-218ENST00000542129 BAZ1BQ9UIG0 1483 aaKnown RBP29.31■■■□□ 2.28
DDX11-218ENST00000542129 NCAPD3P42695 1498 aa29.28■■■□□ 2.28
DDX11-218ENST00000542129 HMGXB3Q12766 1538 aa29.24■■■□□ 2.27
DDX11-218ENST00000542129 CCDC88BA6NC98 1476 aa29.06■■■□□ 2.24
DDX11-218ENST00000542129 DNAJC5BQ9UF47 199 aa28.98■■■□□ 2.23
DDX11-218ENST00000542129 CFTRP13569 1480 aa28.54■■■□□ 2.16
DDX11-218ENST00000542129 CADPSQ9ULU8 1353 aa28.5■■■□□ 2.15
DDX11-218ENST00000542129 CHIC1Q5VXU3 224 aa28.5■■■□□ 2.15
DDX11-218ENST00000542129 PRDM2Q13029 1718 aa28.46■■■□□ 2.15
DDX11-218ENST00000542129 NESP48681 1621 aa28.43■■■□□ 2.14
DDX11-218ENST00000542129 LAMC3Q9Y6N6 1575 aa28.38■■■□□ 2.13
DDX11-218ENST00000542129 ABCC8Q09428 1581 aa28.37■■■□□ 2.13
DDX11-218ENST00000542129 FANCD2Q9BXW9 1451 aa28.21■■■□□ 2.11
DDX11-218ENST00000542129 TRIM41Q8WV44 630 aa28.2■■■□□ 2.1
DDX11-218ENST00000542129 WRNQ14191 1432 aaPredicted RBP eCLIP28.18■■■□□ 2.1
DDX11-218ENST00000542129 PDS5BQ9NTI5 1447 aa28.14■■■□□ 2.1
DDX11-218ENST00000542129 SYNJ1O43426 1573 aa28.12■■■□□ 2.09
DDX11-218ENST00000542129 KIF21AQ7Z4S6 1674 aa28.12■■■□□ 2.09
DDX11-218ENST00000542129 CEP164Q9UPV0 1460 aa28.08■■■□□ 2.09
DDX11-218ENST00000542129 CUX1P39880 1505 aa28.05■■■□□ 2.08
DDX11-218ENST00000542129 TOP2BQ02880 1626 aa28.02■■■□□ 2.08
DDX11-218ENST00000542129 BIVM-ERCC5R4GMW8 1640 aa28.02■■■□□ 2.08
DDX11-218ENST00000542129 DNMBPQ6XZF7 1577 aa27.91■■■□□ 2.06
DDX11-218ENST00000542129 URB2Q14146 1524 aaKnown RBP27.91■■■□□ 2.06
DDX11-218ENST00000542129 ERCC6Q03468 1493 aa27.9■■■□□ 2.06
DDX11-218ENST00000542129 TOPBP1Q92547 1522 aa27.88■■■□□ 2.05
DDX11-218ENST00000542129 MRC2Q9UBG0 1479 aa27.83■■■□□ 2.05
DDX11-218ENST00000542129 FGD5Q6ZNL6 1462 aa27.79■■■□□ 2.04
DDX11-218ENST00000542129 THOC2Q8NI27 1593 aaKnown RBP27.74■■■□□ 2.03
DDX11-218ENST00000542129 SOGA1O94964 1423 aa27.72■■■□□ 2.03
DDX11-218ENST00000542129 POLA1P09884 1462 aaPredicted RBP27.71■■■□□ 2.03
DDX11-218ENST00000542129 FAM9AQ8IZU1 332 aaPredicted RBP27.71■■■□□ 2.03
DDX11-218ENST00000542129 WDR62O43379 1518 aa27.71■■■□□ 2.03
DDX11-218ENST00000542129 RUSC2Q8N2Y8 1516 aa27.66■■■□□ 2.02
DDX11-218ENST00000542129 RAD54L2Q9Y4B4 1467 aa27.63■■■□□ 2.01
DDX11-218ENST00000542129 EEA1Q15075 1411 aa27.55■■■□□ 2
DDX11-218ENST00000542129 CUX2O14529 1486 aa27.54■■■□□ 2
DDX11-218ENST00000542129 WDR97A6NE52 1622 aa27.53■■■□□ 2
DDX11-218ENST00000542129 ABCA10Q8WWZ4 1543 aa27.53■■■□□ 2
DDX11-218ENST00000542129 TARBP1Q13395 1621 aaKnown RBP27.5■■□□□ 1.99
DDX11-218ENST00000542129 KIF27Q86VH2 1401 aa27.49■■□□□ 1.99
DDX11-218ENST00000542129 CSRNP3Q8WYN3 585 aa27.43■■□□□ 1.98
DDX11-218ENST00000542129 IFT140Q96RY7 1462 aa27.42■■□□□ 1.98
DDX11-218ENST00000542129 LOC105371045A0A1W2PR82 267 aa27.4■■□□□ 1.98
DDX11-218ENST00000542129 TDRD9Q8NDG6 1382 aaKnown RBP27.37■■□□□ 1.97
DDX11-218ENST00000542129 ABCA5Q8WWZ7 1642 aa27.36■■□□□ 1.97
DDX11-218ENST00000542129 EHMT2Q96KQ7 1210 aa27.35■■□□□ 1.97
DDX11-218ENST00000542129 ZNF608Q9ULD9 1512 aaPredicted RBP27.3■■□□□ 1.96
DDX11-218ENST00000542129 GAPVD1Q14C86 1478 aa27.3■■□□□ 1.96
DDX11-218ENST00000542129 IGF1RP08069 1367 aa27.28■■□□□ 1.96
DDX11-218ENST00000542129 KIF21BO75037 1637 aa27.27■■□□□ 1.96
DDX11-218ENST00000542129 AQRO60306 1485 aaKnown RBP eCLIP27.27■■□□□ 1.961e-8■■■■■ 33.2
DDX11-218ENST00000542129 PBRM1Q86U86 1689 aa27.24■■□□□ 1.95
DDX11-218ENST00000542129 EIF4G3O43432 1585 aaKnown RBP27.23■■□□□ 1.95
DDX11-218ENST00000542129 PRXQ9BXM0 1461 aa27.22■■□□□ 1.95
DDX11-218ENST00000542129 ERICH3Q5RHP9 1530 aa27.19■■□□□ 1.94
DDX11-218ENST00000542129 GOLGA3Q08378 1498 aa27.19■■□□□ 1.94
DDX11-218ENST00000542129 RAPGEF2Q9Y4G8 1499 aa27.18■■□□□ 1.94
DDX11-218ENST00000542129 CUL7Q14999 1698 aa27.16■■□□□ 1.94
DDX11-218ENST00000542129 CARMIL1Q5VZK9 1371 aa27.15■■□□□ 1.94
DDX11-218ENST00000542129 GRIN2BQ13224 1484 aa27.14■■□□□ 1.93
DDX11-218ENST00000542129 UBTFP17480 764 aaKnown RBP27.07■■□□□ 1.92
DDX11-218ENST00000542129 ADAMTS12P58397 1594 aa27.05■■□□□ 1.92
DDX11-218ENST00000542129 SNAPC4Q5SXM2 1469 aa27.03■■□□□ 1.92
DDX11-218ENST00000542129 TNIKQ9UKE5 1360 aa27.01■■□□□ 1.91
DDX11-218ENST00000542129 FHAD1B1AJZ9 1412 aa26.99■■□□□ 1.91
DDX11-218ENST00000542129 MAGI1Q96QZ7 1491 aaPredicted RBP26.95■■□□□ 1.9
DDX11-218ENST00000542129 CEP162Q5TB80 1403 aa26.86■■□□□ 1.89
DDX11-218ENST00000542129 SYNJ2O15056 1496 aa26.85■■□□□ 1.89
DDX11-218ENST00000542129 CTTNBP2Q8WZ74 1663 aa26.84■■□□□ 1.89
DDX11-218ENST00000542129 GRIN2AQ12879 1464 aa26.81■■□□□ 1.88
DDX11-218ENST00000542129 RANGAP1P46060 587 aaPredicted RBP26.78■■□□□ 1.88
DDX11-218ENST00000542129 CHMP7Q8WUX9 453 aaPredicted RBP26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms