RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 NISCHQ9Y2I1 1504 aa25.96■■□□□ 1.75
DDX11-223ENST00000542838 SHROOM4Q9ULL8 1493 aa22.43■■□□□ 1.18
DDX11-223ENST00000542838 SUPT5HO00267 1087 aaKnown RBP22.14■■□□□ 1.14
DDX11-223ENST00000542838 ZCCHC6Q5VYS8 1495 aaKnown RBP22.01■■□□□ 1.11
DDX11-223ENST00000542838 CCDC180Q9P1Z9 1646 aa21.92■■□□□ 1.1
DDX11-223ENST00000542838 CHIC1Q5VXU3 224 aa21.64■■□□□ 1.05
DDX11-223ENST00000542838 MYO15BQ96JP2 1530 aa21.63■■□□□ 1.05
DDX11-223ENST00000542838 DCAF8L2P0C7V8 631 aa21.55■■□□□ 1.04
DDX11-223ENST00000542838 HRCP23327 699 aa21.48■■□□□ 1.03
DDX11-223ENST00000542838 PCGF6Q9BYE7 350 aa21.3■■□□□ 1
DDX11-223ENST00000542838 DCAF1Q9Y4B6 1507 aa21.26■□□□□ 0.99
DDX11-223ENST00000542838 LOC105371045A0A1W2PR82 267 aa21.03■□□□□ 0.96
DDX11-223ENST00000542838 PPARGC1BQ86YN6 1023 aaKnown RBP21.01■□□□□ 0.95
DDX11-223ENST00000542838 ABCC9O60706 1549 aa20.83■□□□□ 0.93
DDX11-223ENST00000542838 TRIM26Q12899 539 aaPredicted RBP20.81■□□□□ 0.92
DDX11-223ENST00000542838 RSF1Q96T23 1441 aaPredicted RBP20.67■□□□□ 0.9
DDX11-223ENST00000542838 SCRIBQ14160 1630 aa20.66■□□□□ 0.9
DDX11-223ENST00000542838 TRIM41Q8WV44 630 aa20.58■□□□□ 0.89
DDX11-223ENST00000542838 RB1CC1Q8TDY2 1594 aa20.52■□□□□ 0.87
DDX11-223ENST00000542838 ZEB1P37275 1124 aaPredicted RBP20.48■□□□□ 0.87
DDX11-223ENST00000542838 FAM9AQ8IZU1 332 aaPredicted RBP20.46■□□□□ 0.87
DDX11-223ENST00000542838 EHMT2Q96KQ7 1210 aa20.31■□□□□ 0.84
DDX11-223ENST00000542838 CECR2Q9BXF3 1484 aa20.26■□□□□ 0.83
DDX11-223ENST00000542838 MROH2BQ7Z745 1585 aa20.22■□□□□ 0.83
DDX11-223ENST00000542838 NACADO15069 1562 aa20.2■□□□□ 0.82
DDX11-223ENST00000542838 WIZO95785 1651 aa20.15■□□□□ 0.82
DDX11-223ENST00000542838 BAZ1AQ9NRL2 1556 aaPredicted RBP20.02■□□□□ 0.8
DDX11-223ENST00000542838 SCAF1Q9H7N4 1312 aaKnown RBP19.99■□□□□ 0.79
DDX11-223ENST00000542838 EIF4G1Q04637 1599 aaKnown RBP19.95■□□□□ 0.78
DDX11-223ENST00000542838 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.94■□□□□ 0.78
DDX11-223ENST00000542838 PELP1Q8IZL8 1130 aaKnown RBP19.93■□□□□ 0.78
DDX11-223ENST00000542838 CCER1Q8TC90 406 aaPredicted RBP19.91■□□□□ 0.78
DDX11-223ENST00000542838 ABCC8Q09428 1581 aa19.81■□□□□ 0.76
DDX11-223ENST00000542838 TOP2AP11388 1531 aaKnown RBP19.8■□□□□ 0.76
DDX11-223ENST00000542838 CCDC88BA6NC98 1476 aa19.78■□□□□ 0.76
DDX11-223ENST00000542838 WRNQ14191 1432 aaPredicted RBP eCLIP19.76■□□□□ 0.75
DDX11-223ENST00000542838 TTBK1Q5TCY1 1321 aaPredicted RBP19.73■□□□□ 0.75
DDX11-223ENST00000542838 SMARCA4P51532 1647 aa19.72■□□□□ 0.75
DDX11-223ENST00000542838 CEP162Q5TB80 1403 aa19.72■□□□□ 0.75
DDX11-223ENST00000542838 SMARCA2P51531 1590 aa19.71■□□□□ 0.75
DDX11-223ENST00000542838 ACIN1Q9UKV3 1341 aaKnown RBP19.71■□□□□ 0.75
DDX11-223ENST00000542838 DIEXFQ68CQ4 756 aaKnown RBP19.67■□□□□ 0.74
DDX11-223ENST00000542838 SOGA1O94964 1423 aa19.67■□□□□ 0.74
DDX11-223ENST00000542838 TNIKQ9UKE5 1360 aa19.66■□□□□ 0.74
DDX11-223ENST00000542838 NEUROD1Q13562 356 aa19.65■□□□□ 0.74
DDX11-223ENST00000542838 EEA1Q15075 1411 aa19.6■□□□□ 0.73
DDX11-223ENST00000542838 CSRNP3Q8WYN3 585 aa19.6■□□□□ 0.73
DDX11-223ENST00000542838 UBTFP17480 764 aaKnown RBP19.58■□□□□ 0.73
DDX11-223ENST00000542838 UNC13AQ9UPW8 1703 aa19.57■□□□□ 0.72
DDX11-223ENST00000542838 CENPBP07199 599 aaPredicted RBP19.57■□□□□ 0.72
DDX11-223ENST00000542838 RUSC2Q8N2Y8 1516 aa19.57■□□□□ 0.72
DDX11-223ENST00000542838 GOLGA3Q08378 1498 aa19.5■□□□□ 0.71
DDX11-223ENST00000542838 GTF3C3Q9Y5Q9 886 aa19.5■□□□□ 0.71
DDX11-223ENST00000542838 ZNF316A6NFI3 1004 aaPredicted RBP19.45■□□□□ 0.7
DDX11-223ENST00000542838 CEP164Q9UPV0 1460 aa19.35■□□□□ 0.69
DDX11-223ENST00000542838 HNRNPUL2Q1KMD3 747 aaKnown RBP19.33■□□□□ 0.69
DDX11-223ENST00000542838 PABPN1Q86U42 306 aaKnown RBP eCLIP19.32■□□□□ 0.68
DDX11-223ENST00000542838 KIF21BO75037 1637 aa19.32■□□□□ 0.68
DDX11-223ENST00000542838 SYNJ1O43426 1573 aa19.31■□□□□ 0.68
DDX11-223ENST00000542838 CLIP1P30622 1438 aa19.3■□□□□ 0.68
DDX11-223ENST00000542838 PEG3Q9GZU2 1588 aa19.29■□□□□ 0.68
DDX11-223ENST00000542838 BICRAQ9NZM4 1560 aa19.28■□□□□ 0.68
DDX11-223ENST00000542838 YTHDC1Q96MU7 727 aaKnown RBP19.26■□□□□ 0.67
DDX11-223ENST00000542838 VPS8Q8N3P4 1428 aa19.24■□□□□ 0.67
DDX11-223ENST00000542838 APLP2Q06481 763 aa19.23■□□□□ 0.67
DDX11-223ENST00000542838 MIER1Q8N108 512 aa19.21■□□□□ 0.67
DDX11-223ENST00000542838 BAZ1BQ9UIG0 1483 aaKnown RBP19.2■□□□□ 0.66
DDX11-223ENST00000542838 RAPGEF2Q9Y4G8 1499 aa19.18■□□□□ 0.66
DDX11-223ENST00000542838 RANGAP1P46060 587 aaPredicted RBP19.15■□□□□ 0.66
DDX11-223ENST00000542838 ATAD2BQ9ULI0 1458 aa19.14■□□□□ 0.65
DDX11-223ENST00000542838 TOP2BQ02880 1626 aa19.04■□□□□ 0.64
DDX11-223ENST00000542838 MYT1Q01538 1121 aa18.99■□□□□ 0.63
DDX11-223ENST00000542838 CLSPNQ9HAW4 1339 aa18.98■□□□□ 0.63
DDX11-223ENST00000542838 BIVM-ERCC5R4GMW8 1640 aa18.97■□□□□ 0.63
DDX11-223ENST00000542838 ERICH3Q5RHP9 1530 aa18.96■□□□□ 0.63
DDX11-223ENST00000542838 DHX57Q6P158 1386 aaKnown RBP18.95■□□□□ 0.62
DDX11-223ENST00000542838 ARAP1Q96P48 1450 aa18.94■□□□□ 0.62
DDX11-223ENST00000542838 PRXQ9BXM0 1461 aa18.92■□□□□ 0.62
DDX11-223ENST00000542838 KANK4Q5T7N3 995 aaPredicted RBP18.9■□□□□ 0.62
DDX11-223ENST00000542838 RRBP1Q9P2E9 1410 aaKnown RBP18.83■□□□□ 0.6
DDX11-223ENST00000542838 CUX1P39880 1505 aa18.8■□□□□ 0.6
DDX11-223ENST00000542838 KIF27Q86VH2 1401 aa18.79■□□□□ 0.6
DDX11-223ENST00000542838 CCNB3Q8WWL7 1395 aa18.75■□□□□ 0.59
DDX11-223ENST00000542838 CUX2O14529 1486 aa18.75■□□□□ 0.59
DDX11-223ENST00000542838 ARHGAP35Q9NRY4 1499 aa18.73■□□□□ 0.59
DDX11-223ENST00000542838 ITGAEP38570 1179 aa18.72■□□□□ 0.59
DDX11-223ENST00000542838 HMGXB3Q12766 1538 aa18.72■□□□□ 0.59
DDX11-223ENST00000542838 SUPT16HQ9Y5B9 1047 aaKnown RBP18.7■□□□□ 0.58
DDX11-223ENST00000542838 NCAPD3P42695 1498 aa18.69■□□□□ 0.58
DDX11-223ENST00000542838 CFTRP13569 1480 aa18.64■□□□□ 0.57
DDX11-223ENST00000542838 RAB3GAP2Q9H2M9 1393 aa18.63■□□□□ 0.57
DDX11-223ENST00000542838 TIAM1Q13009 1591 aa18.59■□□□□ 0.57
DDX11-223ENST00000542838 MAPKBP1O60336 1514 aa18.58■□□□□ 0.57
DDX11-223ENST00000542838 IGF1RP08069 1367 aa18.55■□□□□ 0.56
DDX11-223ENST00000542838 MAP3K1Q13233 1512 aa18.55■□□□□ 0.56
DDX11-223ENST00000542838 SETD5Q9C0A6 1442 aa18.54■□□□□ 0.56
DDX11-223ENST00000542838 KCNH8Q96L42 1107 aa18.53■□□□□ 0.56
DDX11-223ENST00000542838 PRDM2Q13029 1718 aa18.53■□□□□ 0.56
DDX11-223ENST00000542838 LRRC9Q6ZRR7 1453 aa18.51■□□□□ 0.55
DDX11-223ENST00000542838 CARMIL1Q5VZK9 1371 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms