RNA–Protein interactions for RNA: ENST00000561462.5

IPO4-220, Transcript of importin 4, humanhuman

TSL 2

Gene IPO4, Length 1,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-220ENST00000561462 NISCHQ9Y2I1 1504 aa37.59■■■■□ 3.61
IPO4-220ENST00000561462 CCDC180Q9P1Z9 1646 aa32.87■■■□□ 2.85
IPO4-220ENST00000561462 ZCCHC6Q5VYS8 1495 aaKnown RBP31.55■■■□□ 2.64
IPO4-220ENST00000561462 ABCC9O60706 1549 aa31.5■■■□□ 2.63
IPO4-220ENST00000561462 DCAF8L2P0C7V8 631 aa31.08■■■□□ 2.57
IPO4-220ENST00000561462 DCAF1Q9Y4B6 1507 aa31.08■■■□□ 2.57
IPO4-220ENST00000561462 MYO15BQ96JP2 1530 aa30.77■■■□□ 2.52
IPO4-220ENST00000561462 NACADO15069 1562 aa30.65■■■□□ 2.5
IPO4-220ENST00000561462 SHROOM4Q9ULL8 1493 aa30.53■■■□□ 2.48
IPO4-220ENST00000561462 RB1CC1Q8TDY2 1594 aa30.44■■■□□ 2.46
IPO4-220ENST00000561462 SCRIBQ14160 1630 aa30.2■■■□□ 2.43
IPO4-220ENST00000561462 UNC13AQ9UPW8 1703 aa29.86■■■□□ 2.37
IPO4-220ENST00000561462 PABPN1Q86U42 306 aaKnown RBP eCLIP29.57■■■□□ 2.321e-6■■■■□ 20.5
IPO4-220ENST00000561462 BICRAQ9NZM4 1560 aa29.54■■■□□ 2.32
IPO4-220ENST00000561462 SUPT5HO00267 1087 aaKnown RBP29.27■■■□□ 2.28
IPO4-220ENST00000561462 CECR2Q9BXF3 1484 aa29.22■■■□□ 2.27
IPO4-220ENST00000561462 RSF1Q96T23 1441 aaPredicted RBP29.09■■■□□ 2.25
IPO4-220ENST00000561462 BAZ1AQ9NRL2 1556 aaPredicted RBP29.04■■■□□ 2.24
IPO4-220ENST00000561462 MROH2BQ7Z745 1585 aa29.03■■■□□ 2.24
IPO4-220ENST00000561462 SMARCA4P51532 1647 aa28.94■■■□□ 2.22
IPO4-220ENST00000561462 WIZO95785 1651 aa28.79■■■□□ 2.2
IPO4-220ENST00000561462 EIF4G1Q04637 1599 aaKnown RBP28.71■■■□□ 2.19
IPO4-220ENST00000561462 PEG3Q9GZU2 1588 aa28.6■■■□□ 2.17
IPO4-220ENST00000561462 ATAD2BQ9ULI0 1458 aa28.5■■■□□ 2.15
IPO4-220ENST00000561462 TOP2AP11388 1531 aaKnown RBP28.49■■■□□ 2.15
IPO4-220ENST00000561462 SMARCA2P51531 1590 aa28.48■■■□□ 2.15
IPO4-220ENST00000561462 CC2D2AQ9P2K1 1620 aa28.47■■■□□ 2.15
IPO4-220ENST00000561462 DNAJC5BQ9UF47 199 aa28.37■■■□□ 2.13
IPO4-220ENST00000561462 BAZ1BQ9UIG0 1483 aaKnown RBP28.34■■■□□ 2.13
IPO4-220ENST00000561462 NCAPD3P42695 1498 aa28.28■■■□□ 2.12
IPO4-220ENST00000561462 HMGXB3Q12766 1538 aa28.24■■■□□ 2.11
IPO4-220ENST00000561462 CCDC88BA6NC98 1476 aa28.18■■■□□ 2.1
IPO4-220ENST00000561462 CHIC1Q5VXU3 224 aa27.93■■■□□ 2.06
IPO4-220ENST00000561462 CFTRP13569 1480 aa27.61■■■□□ 2.01
IPO4-220ENST00000561462 ABCC8Q09428 1581 aa27.55■■■□□ 2
IPO4-220ENST00000561462 CADPSQ9ULU8 1353 aa27.54■■■□□ 2
IPO4-220ENST00000561462 TRIM41Q8WV44 630 aa27.54■■■□□ 2
IPO4-220ENST00000561462 PRDM2Q13029 1718 aa27.48■■□□□ 1.99
IPO4-220ENST00000561462 NESP48681 1621 aa27.44■■□□□ 1.98
IPO4-220ENST00000561462 WRNQ14191 1432 aaPredicted RBP eCLIP27.39■■□□□ 1.97
IPO4-220ENST00000561462 LAMC3Q9Y6N6 1575 aa27.36■■□□□ 1.97
IPO4-220ENST00000561462 SYNJ1O43426 1573 aa27.29■■□□□ 1.96
IPO4-220ENST00000561462 FANCD2Q9BXW9 1451 aa27.25■■□□□ 1.95
IPO4-220ENST00000561462 TOP2BQ02880 1626 aa27.19■■□□□ 1.94
IPO4-220ENST00000561462 BIVM-ERCC5R4GMW8 1640 aa27.17■■□□□ 1.94
IPO4-220ENST00000561462 CUX1P39880 1505 aa27.16■■□□□ 1.94
IPO4-220ENST00000561462 PDS5BQ9NTI5 1447 aa27.14■■□□□ 1.94
IPO4-220ENST00000561462 KIF21AQ7Z4S6 1674 aa27.12■■□□□ 1.93
IPO4-220ENST00000561462 CEP164Q9UPV0 1460 aa27.1■■□□□ 1.93
IPO4-220ENST00000561462 ERCC6Q03468 1493 aa27.07■■□□□ 1.92
IPO4-220ENST00000561462 FAM9AQ8IZU1 332 aaPredicted RBP27.02■■□□□ 1.92
IPO4-220ENST00000561462 SOGA1O94964 1423 aa26.99■■□□□ 1.91
IPO4-220ENST00000561462 DNMBPQ6XZF7 1577 aa26.97■■□□□ 1.91
IPO4-220ENST00000561462 TOPBP1Q92547 1522 aa26.94■■□□□ 1.9
IPO4-220ENST00000561462 URB2Q14146 1524 aaKnown RBP26.92■■□□□ 1.9
IPO4-220ENST00000561462 EEA1Q15075 1411 aa26.89■■□□□ 1.9
IPO4-220ENST00000561462 FGD5Q6ZNL6 1462 aa26.89■■□□□ 1.9
IPO4-220ENST00000561462 RUSC2Q8N2Y8 1516 aa26.89■■□□□ 1.9
IPO4-220ENST00000561462 LOC105371045A0A1W2PR82 267 aa26.86■■□□□ 1.89
IPO4-220ENST00000561462 MRC2Q9UBG0 1479 aa26.84■■□□□ 1.89
IPO4-220ENST00000561462 THOC2Q8NI27 1593 aaKnown RBP26.83■■□□□ 1.89
IPO4-220ENST00000561462 POLA1P09884 1462 aaPredicted RBP26.8■■□□□ 1.88
IPO4-220ENST00000561462 CSRNP3Q8WYN3 585 aa26.75■■□□□ 1.87
IPO4-220ENST00000561462 WDR62O43379 1518 aa26.73■■□□□ 1.87
IPO4-220ENST00000561462 KIF27Q86VH2 1401 aa26.71■■□□□ 1.87
IPO4-220ENST00000561462 RAD54L2Q9Y4B4 1467 aa26.7■■□□□ 1.86
IPO4-220ENST00000561462 CUX2O14529 1486 aa26.69■■□□□ 1.86
IPO4-220ENST00000561462 EHMT2Q96KQ7 1210 aa26.66■■□□□ 1.86
IPO4-220ENST00000561462 ABCA10Q8WWZ4 1543 aa26.65■■□□□ 1.86
IPO4-220ENST00000561462 WDR97A6NE52 1622 aa26.59■■□□□ 1.85
IPO4-220ENST00000561462 KIF21BO75037 1637 aa26.56■■□□□ 1.84
IPO4-220ENST00000561462 TARBP1Q13395 1621 aaKnown RBP26.55■■□□□ 1.84
IPO4-220ENST00000561462 GOLGA3Q08378 1498 aa26.52■■□□□ 1.84
IPO4-220ENST00000561462 PRXQ9BXM0 1461 aa26.49■■□□□ 1.83
IPO4-220ENST00000561462 IGF1RP08069 1367 aa26.48■■□□□ 1.83
IPO4-220ENST00000561462 ABCA5Q8WWZ7 1642 aa26.46■■□□□ 1.83
IPO4-220ENST00000561462 TDRD9Q8NDG6 1382 aaKnown RBP26.46■■□□□ 1.83
IPO4-220ENST00000561462 IFT140Q96RY7 1462 aa26.45■■□□□ 1.82
IPO4-220ENST00000561462 RAPGEF2Q9Y4G8 1499 aa26.45■■□□□ 1.82
IPO4-220ENST00000561462 ERICH3Q5RHP9 1530 aa26.42■■□□□ 1.82
IPO4-220ENST00000561462 GAPVD1Q14C86 1478 aa26.4■■□□□ 1.82
IPO4-220ENST00000561462 UBTFP17480 764 aaKnown RBP26.4■■□□□ 1.82
IPO4-220ENST00000561462 TNIKQ9UKE5 1360 aa26.39■■□□□ 1.81
IPO4-220ENST00000561462 CARMIL1Q5VZK9 1371 aa26.34■■□□□ 1.81
IPO4-220ENST00000561462 ZNF608Q9ULD9 1512 aaPredicted RBP26.32■■□□□ 1.8
IPO4-220ENST00000561462 AQRO60306 1485 aaKnown RBP eCLIP26.32■■□□□ 1.83e-7■■■■■ 29.2
IPO4-220ENST00000561462 CUL7Q14999 1698 aa26.31■■□□□ 1.8
IPO4-220ENST00000561462 PBRM1Q86U86 1689 aa26.28■■□□□ 1.8
IPO4-220ENST00000561462 CEP162Q5TB80 1403 aa26.25■■□□□ 1.79
IPO4-220ENST00000561462 EIF4G3O43432 1585 aaKnown RBP26.25■■□□□ 1.79
IPO4-220ENST00000561462 GRIN2BQ13224 1484 aa26.22■■□□□ 1.79
IPO4-220ENST00000561462 ADAMTS12P58397 1594 aa26.13■■□□□ 1.77
IPO4-220ENST00000561462 FHAD1B1AJZ9 1412 aa26.11■■□□□ 1.77
IPO4-220ENST00000561462 CLIP1P30622 1438 aa26.09■■□□□ 1.77
IPO4-220ENST00000561462 SNAPC4Q5SXM2 1469 aa26.07■■□□□ 1.76
IPO4-220ENST00000561462 RANGAP1P46060 587 aaPredicted RBP26.03■■□□□ 1.76
IPO4-220ENST00000561462 MAGI1Q96QZ7 1491 aaPredicted RBP26.03■■□□□ 1.76
IPO4-220ENST00000561462 CTTNBP2Q8WZ74 1663 aa26■■□□□ 1.75
IPO4-220ENST00000561462 SYNJ2O15056 1496 aa25.93■■□□□ 1.74
IPO4-220ENST00000561462 GRIN2AQ12879 1464 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms