RNA–Protein interactions for RNA: ENST00000308696.10

PSMD1-201, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMD1, Length 3,326 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-201ENST00000308696 NISCHQ9Y2I1 1504 aa24.09■■□□□ 1.45
PSMD1-201ENST00000308696 SHROOM4Q9ULL8 1493 aa21■□□□□ 0.95
PSMD1-201ENST00000308696 DCAF8L2P0C7V8 631 aa20.86■□□□□ 0.93
PSMD1-201ENST00000308696 SUPT5HO00267 1087 aaKnown RBP20.6■□□□□ 0.89
PSMD1-201ENST00000308696 CCDC180Q9P1Z9 1646 aa20.26■□□□□ 0.83
PSMD1-201ENST00000308696 ZCCHC6Q5VYS8 1495 aaKnown RBP20.26■□□□□ 0.83
PSMD1-201ENST00000308696 CHIC1Q5VXU3 224 aa19.65■□□□□ 0.74
PSMD1-201ENST00000308696 DCAF1Q9Y4B6 1507 aa19.52■□□□□ 0.72
PSMD1-201ENST00000308696 ABCC9O60706 1549 aa19.51■□□□□ 0.71
PSMD1-201ENST00000308696 SCRIBQ14160 1630 aa19.37■□□□□ 0.69
PSMD1-201ENST00000308696 MYO15BQ96JP2 1530 aa19.36■□□□□ 0.69
PSMD1-201ENST00000308696 LOC105371045A0A1W2PR82 267 aa19.27■□□□□ 0.68
PSMD1-201ENST00000308696 EHMT2Q96KQ7 1210 aa19.16■□□□□ 0.66
PSMD1-201ENST00000308696 FAM9AQ8IZU1 332 aaPredicted RBP19.13■□□□□ 0.65
PSMD1-201ENST00000308696 PCGF6Q9BYE7 350 aa19.13■□□□□ 0.65
PSMD1-201ENST00000308696 RSF1Q96T23 1441 aaPredicted RBP19.11■□□□□ 0.65
PSMD1-201ENST00000308696 TRIM41Q8WV44 630 aa19.08■□□□□ 0.64
PSMD1-201ENST00000308696 CECR2Q9BXF3 1484 aa18.96■□□□□ 0.63
PSMD1-201ENST00000308696 NACADO15069 1562 aa18.96■□□□□ 0.63
PSMD1-201ENST00000308696 PABPN1Q86U42 306 aaKnown RBP eCLIP18.84■□□□□ 0.61
PSMD1-201ENST00000308696 RB1CC1Q8TDY2 1594 aa18.82■□□□□ 0.6
PSMD1-201ENST00000308696 MROH2BQ7Z745 1585 aa18.8■□□□□ 0.6
PSMD1-201ENST00000308696 HRCP23327 699 aa18.76■□□□□ 0.59
PSMD1-201ENST00000308696 WIZO95785 1651 aa18.64■□□□□ 0.57
PSMD1-201ENST00000308696 PPARGC1BQ86YN6 1023 aaKnown RBP18.62■□□□□ 0.57
PSMD1-201ENST00000308696 TRIM26Q12899 539 aaPredicted RBP18.59■□□□□ 0.57
PSMD1-201ENST00000308696 BAZ1AQ9NRL2 1556 aaPredicted RBP18.5■□□□□ 0.55
PSMD1-201ENST00000308696 TTBK1Q5TCY1 1321 aaPredicted RBP18.45■□□□□ 0.54
PSMD1-201ENST00000308696 CCDC88BA6NC98 1476 aa18.35■□□□□ 0.53
PSMD1-201ENST00000308696 SMARCA4P51532 1647 aa18.32■□□□□ 0.52
PSMD1-201ENST00000308696 UBTFP17480 764 aaKnown RBP18.3■□□□□ 0.52
PSMD1-201ENST00000308696 ABCC8Q09428 1581 aa18.3■□□□□ 0.52
PSMD1-201ENST00000308696 TOP2AP11388 1531 aaKnown RBP18.26■□□□□ 0.51
PSMD1-201ENST00000308696 UNC13AQ9UPW8 1703 aa18.24■□□□□ 0.51
PSMD1-201ENST00000308696 RANGAP1P46060 587 aaPredicted RBP18.21■□□□□ 0.51
PSMD1-201ENST00000308696 SOGA1O94964 1423 aa18.17■□□□□ 0.5
PSMD1-201ENST00000308696 SMARCA2P51531 1590 aa18.17■□□□□ 0.5
PSMD1-201ENST00000308696 CSRNP3Q8WYN3 585 aa18.16■□□□□ 0.5
PSMD1-201ENST00000308696 BICRAQ9NZM4 1560 aa18.16■□□□□ 0.5
PSMD1-201ENST00000308696 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.08■□□□□ 0.48
PSMD1-201ENST00000308696 ZEB1P37275 1124 aaPredicted RBP18.07■□□□□ 0.48
PSMD1-201ENST00000308696 RUSC2Q8N2Y8 1516 aa18.06■□□□□ 0.48
PSMD1-201ENST00000308696 CCER1Q8TC90 406 aaPredicted RBP18.04■□□□□ 0.48
PSMD1-201ENST00000308696 BAZ1BQ9UIG0 1483 aaKnown RBP18.04■□□□□ 0.48
PSMD1-201ENST00000308696 WRNQ14191 1432 aaPredicted RBP eCLIP18.03■□□□□ 0.48
PSMD1-201ENST00000308696 EIF4G1Q04637 1599 aaKnown RBP18.02■□□□□ 0.47
PSMD1-201ENST00000308696 ATAD2BQ9ULI0 1458 aa18.02■□□□□ 0.47
PSMD1-201ENST00000308696 CEP162Q5TB80 1403 aa17.97■□□□□ 0.47
PSMD1-201ENST00000308696 TNIKQ9UKE5 1360 aa17.9■□□□□ 0.46
PSMD1-201ENST00000308696 APLP2Q06481 763 aa17.88■□□□□ 0.45
PSMD1-201ENST00000308696 EEA1Q15075 1411 aa17.85■□□□□ 0.45
PSMD1-201ENST00000308696 HNRNPUL2Q1KMD3 747 aaKnown RBP17.82■□□□□ 0.44
PSMD1-201ENST00000308696 GOLGA3Q08378 1498 aa17.82■□□□□ 0.44
PSMD1-201ENST00000308696 PEG3Q9GZU2 1588 aa17.8■□□□□ 0.44
PSMD1-201ENST00000308696 SYNJ1O43426 1573 aa17.78■□□□□ 0.44
PSMD1-201ENST00000308696 CLIP1P30622 1438 aa17.72■□□□□ 0.43
PSMD1-201ENST00000308696 CEP164Q9UPV0 1460 aa17.72■□□□□ 0.43
PSMD1-201ENST00000308696 RAPGEF2Q9Y4G8 1499 aa17.68■□□□□ 0.42
PSMD1-201ENST00000308696 NCAPD3P42695 1498 aa17.63■□□□□ 0.41
PSMD1-201ENST00000308696 ATP1B4Q9UN42 357 aaPredicted RBP17.54■□□□□ 0.4
PSMD1-201ENST00000308696 ITGAEP38570 1179 aa17.52■□□□□ 0.4
PSMD1-201ENST00000308696 VPS8Q8N3P4 1428 aa17.52■□□□□ 0.39
PSMD1-201ENST00000308696 KIF27Q86VH2 1401 aa17.5■□□□□ 0.39
PSMD1-201ENST00000308696 TOP2BQ02880 1626 aa17.5■□□□□ 0.39
PSMD1-201ENST00000308696 DIEXFQ68CQ4 756 aaKnown RBP17.49■□□□□ 0.39
PSMD1-201ENST00000308696 HMGXB3Q12766 1538 aa17.48■□□□□ 0.39
PSMD1-201ENST00000308696 KIF21BO75037 1637 aa17.48■□□□□ 0.39
PSMD1-201ENST00000308696 P3H3Q8IVL6 736 aa17.48■□□□□ 0.39
PSMD1-201ENST00000308696 CUX1P39880 1505 aa17.47■□□□□ 0.39
PSMD1-201ENST00000308696 CFTRP13569 1480 aa17.46■□□□□ 0.39
PSMD1-201ENST00000308696 KANK4Q5T7N3 995 aaPredicted RBP17.46■□□□□ 0.39
PSMD1-201ENST00000308696 CADPSQ9ULU8 1353 aa17.44■□□□□ 0.38
PSMD1-201ENST00000308696 CUX2O14529 1486 aa17.42■□□□□ 0.38
PSMD1-201ENST00000308696 PRXQ9BXM0 1461 aa17.38■□□□□ 0.37
PSMD1-201ENST00000308696 ZNF316A6NFI3 1004 aaPredicted RBP17.33■□□□□ 0.36
PSMD1-201ENST00000308696 BIVM-ERCC5R4GMW8 1640 aa17.33■□□□□ 0.36
PSMD1-201ENST00000308696 IGF1RP08069 1367 aa17.32■□□□□ 0.36
PSMD1-201ENST00000308696 CARMIL1Q5VZK9 1371 aa17.32■□□□□ 0.36
PSMD1-201ENST00000308696 CC2D2AQ9P2K1 1620 aa17.31■□□□□ 0.36
PSMD1-201ENST00000308696 ARAP1Q96P48 1450 aa17.3■□□□□ 0.36
PSMD1-201ENST00000308696 YTHDC1Q96MU7 727 aaKnown RBP17.3■□□□□ 0.36
PSMD1-201ENST00000308696 DNAJC5BQ9UF47 199 aa17.29■□□□□ 0.36
PSMD1-201ENST00000308696 FGD5Q6ZNL6 1462 aa17.28■□□□□ 0.36
PSMD1-201ENST00000308696 FANCD2Q9BXW9 1451 aa17.26■□□□□ 0.35
PSMD1-201ENST00000308696 ERICH3Q5RHP9 1530 aa17.25■□□□□ 0.35
PSMD1-201ENST00000308696 FAM50AQ14320 339 aaKnown RBP17.25■□□□□ 0.35
PSMD1-201ENST00000308696 NESP48681 1621 aa17.25■□□□□ 0.35
PSMD1-201ENST00000308696 SCAF1Q9H7N4 1312 aaKnown RBP17.22■□□□□ 0.35
PSMD1-201ENST00000308696 RAD54L2Q9Y4B4 1467 aa17.22■□□□□ 0.35
PSMD1-201ENST00000308696 ARHGAP35Q9NRY4 1499 aa17.2■□□□□ 0.34
PSMD1-201ENST00000308696 NEUROD1Q13562 356 aa17.18■□□□□ 0.34
PSMD1-201ENST00000308696 CENPBP07199 599 aaPredicted RBP17.17■□□□□ 0.34
PSMD1-201ENST00000308696 TDRD9Q8NDG6 1382 aaKnown RBP17.15■□□□□ 0.34
PSMD1-201ENST00000308696 CCNB3Q8WWL7 1395 aa17.13■□□□□ 0.33
PSMD1-201ENST00000308696 ACIN1Q9UKV3 1341 aaKnown RBP17.13■□□□□ 0.33
PSMD1-201ENST00000308696 MIER1Q8N108 512 aa17.12■□□□□ 0.33
PSMD1-201ENST00000308696 ARID3CA6NKF2 412 aa17.08■□□□□ 0.32
PSMD1-201ENST00000308696 FHOD3Q2V2M9 1422 aa17.08■□□□□ 0.32
PSMD1-201ENST00000308696 DHX57Q6P158 1386 aaKnown RBP17.07■□□□□ 0.32
PSMD1-201ENST00000308696 POLA1P09884 1462 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms