RNA–Protein interactions for RNA: ENST00000431051.5

PSMD1-204, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 1 (best)

Gene PSMD1, Length 2,506 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-204ENST00000431051 NISCHQ9Y2I1 1504 aa31.56■■■□□ 2.64
PSMD1-204ENST00000431051 SHROOM4Q9ULL8 1493 aa26.98■■□□□ 1.91
PSMD1-204ENST00000431051 CCDC180Q9P1Z9 1646 aa26.81■■□□□ 1.88
PSMD1-204ENST00000431051 ZCCHC6Q5VYS8 1495 aaKnown RBP26.66■■□□□ 1.86
PSMD1-204ENST00000431051 SUPT5HO00267 1087 aaKnown RBP26.4■■□□□ 1.82
PSMD1-204ENST00000431051 DCAF8L2P0C7V8 631 aa26.39■■□□□ 1.82
PSMD1-204ENST00000431051 DCAF1Q9Y4B6 1507 aa25.82■■□□□ 1.72
PSMD1-204ENST00000431051 CHIC1Q5VXU3 224 aa25.54■■□□□ 1.68
PSMD1-204ENST00000431051 MYO15BQ96JP2 1530 aa25.41■■□□□ 1.66
PSMD1-204ENST00000431051 SCRIBQ14160 1630 aa25.24■■□□□ 1.63
PSMD1-204ENST00000431051 ABCC9O60706 1549 aa25.13■■□□□ 1.61
PSMD1-204ENST00000431051 RSF1Q96T23 1441 aaPredicted RBP24.96■■□□□ 1.59
PSMD1-204ENST00000431051 NACADO15069 1562 aa24.85■■□□□ 1.57
PSMD1-204ENST00000431051 LOC105371045A0A1W2PR82 267 aa24.84■■□□□ 1.57
PSMD1-204ENST00000431051 RB1CC1Q8TDY2 1594 aa24.69■■□□□ 1.54
PSMD1-204ENST00000431051 CECR2Q9BXF3 1484 aa24.69■■□□□ 1.54
PSMD1-204ENST00000431051 PCGF6Q9BYE7 350 aa24.69■■□□□ 1.54
PSMD1-204ENST00000431051 MROH2BQ7Z745 1585 aa24.57■■□□□ 1.52
PSMD1-204ENST00000431051 TRIM41Q8WV44 630 aa24.56■■□□□ 1.52
PSMD1-204ENST00000431051 HRCP23327 699 aa24.53■■□□□ 1.52
PSMD1-204ENST00000431051 WIZO95785 1651 aa24.43■■□□□ 1.5
PSMD1-204ENST00000431051 FAM9AQ8IZU1 332 aaPredicted RBP24.42■■□□□ 1.5
PSMD1-204ENST00000431051 EHMT2Q96KQ7 1210 aa24.29■■□□□ 1.48
PSMD1-204ENST00000431051 BAZ1AQ9NRL2 1556 aaPredicted RBP24.24■■□□□ 1.47
PSMD1-204ENST00000431051 TRIM26Q12899 539 aaPredicted RBP24.17■■□□□ 1.46
PSMD1-204ENST00000431051 PPARGC1BQ86YN6 1023 aaKnown RBP24.14■■□□□ 1.45
PSMD1-204ENST00000431051 UNC13AQ9UPW8 1703 aa24.12■■□□□ 1.45
PSMD1-204ENST00000431051 SMARCA4P51532 1647 aa24.06■■□□□ 1.44
PSMD1-204ENST00000431051 PABPN1Q86U42 306 aaKnown RBP eCLIP24.04■■□□□ 1.44
PSMD1-204ENST00000431051 TOP2AP11388 1531 aaKnown RBP24■■□□□ 1.43
PSMD1-204ENST00000431051 EIF4G1Q04637 1599 aaKnown RBP23.97■■□□□ 1.43
PSMD1-204ENST00000431051 CCDC88BA6NC98 1476 aa23.95■■□□□ 1.42
PSMD1-204ENST00000431051 SMARCA2P51531 1590 aa23.88■■□□□ 1.41
PSMD1-204ENST00000431051 ABCC8Q09428 1581 aa23.88■■□□□ 1.41
PSMD1-204ENST00000431051 BICRAQ9NZM4 1560 aa23.85■■□□□ 1.41
PSMD1-204ENST00000431051 SOGA1O94964 1423 aa23.64■■□□□ 1.37
PSMD1-204ENST00000431051 PEG3Q9GZU2 1588 aa23.55■■□□□ 1.36
PSMD1-204ENST00000431051 RUSC2Q8N2Y8 1516 aa23.53■■□□□ 1.36
PSMD1-204ENST00000431051 ZEB1P37275 1124 aaPredicted RBP23.53■■□□□ 1.36
PSMD1-204ENST00000431051 ATAD2BQ9ULI0 1458 aa23.49■■□□□ 1.35
PSMD1-204ENST00000431051 CSRNP3Q8WYN3 585 aa23.48■■□□□ 1.35
PSMD1-204ENST00000431051 TTBK1Q5TCY1 1321 aaPredicted RBP23.46■■□□□ 1.35
PSMD1-204ENST00000431051 WRNQ14191 1432 aaPredicted RBP eCLIP23.46■■□□□ 1.35
PSMD1-204ENST00000431051 CEP162Q5TB80 1403 aa23.45■■□□□ 1.34
PSMD1-204ENST00000431051 BAZ1BQ9UIG0 1483 aaKnown RBP23.44■■□□□ 1.34
PSMD1-204ENST00000431051 UBTFP17480 764 aaKnown RBP23.43■■□□□ 1.34
PSMD1-204ENST00000431051 EEA1Q15075 1411 aa23.39■■□□□ 1.33
PSMD1-204ENST00000431051 TNIKQ9UKE5 1360 aa23.38■■□□□ 1.33
PSMD1-204ENST00000431051 SYNJ1O43426 1573 aa23.34■■□□□ 1.33
PSMD1-204ENST00000431051 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.31■■□□□ 1.32
PSMD1-204ENST00000431051 GOLGA3Q08378 1498 aa23.27■■□□□ 1.32
PSMD1-204ENST00000431051 CCER1Q8TC90 406 aaPredicted RBP23.22■■□□□ 1.31
PSMD1-204ENST00000431051 CEP164Q9UPV0 1460 aa23.15■■□□□ 1.3
PSMD1-204ENST00000431051 RANGAP1P46060 587 aaPredicted RBP23.09■■□□□ 1.29
PSMD1-204ENST00000431051 KIF21BO75037 1637 aa23.08■■□□□ 1.29
PSMD1-204ENST00000431051 RAPGEF2Q9Y4G8 1499 aa23.05■■□□□ 1.28
PSMD1-204ENST00000431051 CLIP1P30622 1438 aa23.04■■□□□ 1.28
PSMD1-204ENST00000431051 TOP2BQ02880 1626 aa23.03■■□□□ 1.28
PSMD1-204ENST00000431051 NCAPD3P42695 1498 aa23.02■■□□□ 1.28
PSMD1-204ENST00000431051 HMGXB3Q12766 1538 aa22.98■■□□□ 1.27
PSMD1-204ENST00000431051 BIVM-ERCC5R4GMW8 1640 aa22.92■■□□□ 1.26
PSMD1-204ENST00000431051 VPS8Q8N3P4 1428 aa22.9■■□□□ 1.26
PSMD1-204ENST00000431051 CUX1P39880 1505 aa22.87■■□□□ 1.25
PSMD1-204ENST00000431051 HNRNPUL2Q1KMD3 747 aaKnown RBP22.86■■□□□ 1.25
PSMD1-204ENST00000431051 APLP2Q06481 763 aa22.85■■□□□ 1.25
PSMD1-204ENST00000431051 CFTRP13569 1480 aa22.82■■□□□ 1.24
PSMD1-204ENST00000431051 PRXQ9BXM0 1461 aa22.79■■□□□ 1.24
PSMD1-204ENST00000431051 KIF27Q86VH2 1401 aa22.74■■□□□ 1.23
PSMD1-204ENST00000431051 ERICH3Q5RHP9 1530 aa22.73■■□□□ 1.23
PSMD1-204ENST00000431051 DIEXFQ68CQ4 756 aaKnown RBP22.66■■□□□ 1.22
PSMD1-204ENST00000431051 ARAP1Q96P48 1450 aa22.66■■□□□ 1.22
PSMD1-204ENST00000431051 CADPSQ9ULU8 1353 aa22.62■■□□□ 1.21
PSMD1-204ENST00000431051 KANK4Q5T7N3 995 aaPredicted RBP22.6■■□□□ 1.21
PSMD1-204ENST00000431051 CUX2O14529 1486 aa22.58■■□□□ 1.21
PSMD1-204ENST00000431051 PRDM2Q13029 1718 aa22.55■■□□□ 1.2
PSMD1-204ENST00000431051 CC2D2AQ9P2K1 1620 aa22.54■■□□□ 1.2
PSMD1-204ENST00000431051 SCAF1Q9H7N4 1312 aaKnown RBP22.54■■□□□ 1.2
PSMD1-204ENST00000431051 IGF1RP08069 1367 aa22.52■■□□□ 1.2
PSMD1-204ENST00000431051 ZNF316A6NFI3 1004 aaPredicted RBP22.51■■□□□ 1.19
PSMD1-204ENST00000431051 FGD5Q6ZNL6 1462 aa22.5■■□□□ 1.19
PSMD1-204ENST00000431051 ARHGAP35Q9NRY4 1499 aa22.5■■□□□ 1.19
PSMD1-204ENST00000431051 CARMIL1Q5VZK9 1371 aa22.43■■□□□ 1.18
PSMD1-204ENST00000431051 FANCD2Q9BXW9 1451 aa22.41■■□□□ 1.18
PSMD1-204ENST00000431051 NEUROD1Q13562 356 aa22.38■■□□□ 1.17
PSMD1-204ENST00000431051 ACIN1Q9UKV3 1341 aaKnown RBP22.36■■□□□ 1.17
PSMD1-204ENST00000431051 ITGAEP38570 1179 aa22.34■■□□□ 1.17
PSMD1-204ENST00000431051 NESP48681 1621 aa22.34■■□□□ 1.17
PSMD1-204ENST00000431051 RRBP1Q9P2E9 1410 aaKnown RBP22.32■■□□□ 1.16
PSMD1-204ENST00000431051 RAD54L2Q9Y4B4 1467 aa22.32■■□□□ 1.16
PSMD1-204ENST00000431051 DHX57Q6P158 1386 aaKnown RBP22.31■■□□□ 1.16
PSMD1-204ENST00000431051 P3H3Q8IVL6 736 aa22.31■■□□□ 1.16
PSMD1-204ENST00000431051 CCNB3Q8WWL7 1395 aa22.29■■□□□ 1.16
PSMD1-204ENST00000431051 CENPBP07199 599 aaPredicted RBP22.24■■□□□ 1.15
PSMD1-204ENST00000431051 POLA1P09884 1462 aaPredicted RBP22.24■■□□□ 1.15
PSMD1-204ENST00000431051 DNMBPQ6XZF7 1577 aa22.24■■□□□ 1.15
PSMD1-204ENST00000431051 TOPBP1Q92547 1522 aa22.24■■□□□ 1.15
PSMD1-204ENST00000431051 ATP1B4Q9UN42 357 aaPredicted RBP22.23■■□□□ 1.15
PSMD1-204ENST00000431051 MIER1Q8N108 512 aa22.21■■□□□ 1.15
PSMD1-204ENST00000431051 YTHDC1Q96MU7 727 aaKnown RBP22.2■■□□□ 1.14
PSMD1-204ENST00000431051 TIAM1Q13009 1591 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms