RNA–Protein interactions for RNA: ENST00000415475.6

DDX11-203, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 3

Gene DDX11, Length 883 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-203ENST00000415475 NISCHQ9Y2I1 1504 aa28.8■■■□□ 2.2
DDX11-203ENST00000415475 CHIC1Q5VXU3 224 aa26.38■■□□□ 1.81
DDX11-203ENST00000415475 AEBP2Q6ZN18 517 aaPredicted RBP26.36■■□□□ 1.81
DDX11-203ENST00000415475 ABCC9O60706 1549 aa26.16■■□□□ 1.78
DDX11-203ENST00000415475 CCDC180Q9P1Z9 1646 aa25.97■■□□□ 1.75
DDX11-203ENST00000415475 RB1CC1Q8TDY2 1594 aa24.8■■□□□ 1.56
DDX11-203ENST00000415475 DNAJC5BQ9UF47 199 aa24.72■■□□□ 1.55
DDX11-203ENST00000415475 NACADO15069 1562 aa24.56■■□□□ 1.52
DDX11-203ENST00000415475 DCAF8L2P0C7V8 631 aa24.34■■□□□ 1.49
DDX11-203ENST00000415475 UNC13AQ9UPW8 1703 aa24.34■■□□□ 1.49
DDX11-203ENST00000415475 PABPN1Q86U42 306 aaKnown RBP eCLIP24.3■■□□□ 1.48
DDX11-203ENST00000415475 MYO15BQ96JP2 1530 aa24.14■■□□□ 1.45
DDX11-203ENST00000415475 BICRAQ9NZM4 1560 aa24.12■■□□□ 1.45
DDX11-203ENST00000415475 ZCCHC6Q5VYS8 1495 aaKnown RBP24.02■■□□□ 1.44
DDX11-203ENST00000415475 DCAF1Q9Y4B6 1507 aa23.92■■□□□ 1.42
DDX11-203ENST00000415475 SHROOM4Q9ULL8 1493 aa23.7■■□□□ 1.38
DDX11-203ENST00000415475 SCRIBQ14160 1630 aa23.67■■□□□ 1.38
DDX11-203ENST00000415475 CC2D2AQ9P2K1 1620 aa23.64■■□□□ 1.38
DDX11-203ENST00000415475 CECR2Q9BXF3 1484 aa23.57■■□□□ 1.36
DDX11-203ENST00000415475 EIF4G1Q04637 1599 aaKnown RBP23.52■■□□□ 1.36
DDX11-203ENST00000415475 PHF23Q9BUL5 403 aaPredicted RBP23.34■■□□□ 1.33
DDX11-203ENST00000415475 DNAJC5Q9H3Z4 198 aa22.8■■□□□ 1.24
DDX11-203ENST00000415475 NCAPD3P42695 1498 aa22.66■■□□□ 1.22
DDX11-203ENST00000415475 CUX2O14529 1486 aa22.6■■□□□ 1.21
DDX11-203ENST00000415475 ATAD2BQ9ULI0 1458 aa22.59■■□□□ 1.21
DDX11-203ENST00000415475 ERCC6Q03468 1493 aa22.57■■□□□ 1.2
DDX11-203ENST00000415475 SMARCA4P51532 1647 aa22.55■■□□□ 1.2
DDX11-203ENST00000415475 HMGXB3Q12766 1538 aa22.51■■□□□ 1.19
DDX11-203ENST00000415475 SMARCA2P51531 1590 aa22.5■■□□□ 1.19
DDX11-203ENST00000415475 NESP48681 1621 aa22.44■■□□□ 1.18
DDX11-203ENST00000415475 BAZ1AQ9NRL2 1556 aaPredicted RBP22.37■■□□□ 1.17
DDX11-203ENST00000415475 BAZ1BQ9UIG0 1483 aaKnown RBP22.35■■□□□ 1.17
DDX11-203ENST00000415475 PEG3Q9GZU2 1588 aa22.31■■□□□ 1.16
DDX11-203ENST00000415475 THOC2Q8NI27 1593 aaKnown RBP22.27■■□□□ 1.16
DDX11-203ENST00000415475 MROH2BQ7Z745 1585 aa22.21■■□□□ 1.15
DDX11-203ENST00000415475 LAMC3Q9Y6N6 1575 aa22.21■■□□□ 1.15
DDX11-203ENST00000415475 KIF21AQ7Z4S6 1674 aa22.17■■□□□ 1.14
DDX11-203ENST00000415475 SENP3Q9H4L4 574 aaPredicted RBP22.13■■□□□ 1.13
DDX11-203ENST00000415475 PDS5BQ9NTI5 1447 aa22.05■■□□□ 1.12
DDX11-203ENST00000415475 RSF1Q96T23 1441 aaPredicted RBP22.03■■□□□ 1.12
DDX11-203ENST00000415475 WIZO95785 1651 aa21.97■■□□□ 1.11
DDX11-203ENST00000415475 CADPSQ9ULU8 1353 aa21.96■■□□□ 1.11
DDX11-203ENST00000415475 MRC2Q9UBG0 1479 aa21.91■■□□□ 1.1
DDX11-203ENST00000415475 WDR62O43379 1518 aa21.88■■□□□ 1.09
DDX11-203ENST00000415475 CEP164Q9UPV0 1460 aa21.77■■□□□ 1.08
DDX11-203ENST00000415475 TRIM41Q8WV44 630 aa21.74■■□□□ 1.07
DDX11-203ENST00000415475 FANCD2Q9BXW9 1451 aa21.74■■□□□ 1.07
DDX11-203ENST00000415475 TOP2AP11388 1531 aaKnown RBP21.71■■□□□ 1.07
DDX11-203ENST00000415475 PLPPR3Q6T4P5 718 aa21.69■■□□□ 1.06
DDX11-203ENST00000415475 CFTRP13569 1480 aa21.68■■□□□ 1.06
DDX11-203ENST00000415475 SUPT5HO00267 1087 aaKnown RBP21.66■■□□□ 1.06
DDX11-203ENST00000415475 URB2Q14146 1524 aaKnown RBP21.6■■□□□ 1.05
DDX11-203ENST00000415475 PRDM2Q13029 1718 aa21.54■■□□□ 1.04
DDX11-203ENST00000415475 OSCARQ8IYS5 282 aa21.49■■□□□ 1.03
DDX11-203ENST00000415475 CCDC88BA6NC98 1476 aa21.43■■□□□ 1.02
DDX11-203ENST00000415475 ZNF608Q9ULD9 1512 aaPredicted RBP21.36■■□□□ 1.01
DDX11-203ENST00000415475 RIMBP3CA6NJZ7 1639 aa21.33■■□□□ 1.01
DDX11-203ENST00000415475 RIMBP3BA6NNM3 1639 aa21.33■■□□□ 1.01
DDX11-203ENST00000415475 RIMBP3Q9UFD9 1639 aa21.33■■□□□ 1.01
DDX11-203ENST00000415475 IFT140Q96RY7 1462 aa21.33■■□□□ 1.01
DDX11-203ENST00000415475 TOPBP1Q92547 1522 aa21.31■■□□□ 1
DDX11-203ENST00000415475 EIF4G3O43432 1585 aaKnown RBP21.26■□□□□ 0.99
DDX11-203ENST00000415475 DNMBPQ6XZF7 1577 aa21.23■□□□□ 0.99
DDX11-203ENST00000415475 ARHGEF11O15085 1522 aa21.22■□□□□ 0.99
DDX11-203ENST00000415475 ABCC8Q09428 1581 aa21.19■□□□□ 0.98
DDX11-203ENST00000415475 TARBP1Q13395 1621 aaKnown RBP21.17■□□□□ 0.98
DDX11-203ENST00000415475 CHD1O14646 1710 aa21.17■□□□□ 0.98
DDX11-203ENST00000415475 AQRO60306 1485 aaKnown RBP eCLIP21.13■□□□□ 0.971e-9■■■■■ 30.7
DDX11-203ENST00000415475 POLA1P09884 1462 aaPredicted RBP21.08■□□□□ 0.97
DDX11-203ENST00000415475 RAD54L2Q9Y4B4 1467 aa21.02■□□□□ 0.96
DDX11-203ENST00000415475 CYB5RLQ6IPT4 315 aa21.02■□□□□ 0.96
DDX11-203ENST00000415475 ARAP1Q96P48 1450 aa21.01■□□□□ 0.95
DDX11-203ENST00000415475 FBLN2P98095 1184 aa20.98■□□□□ 0.95
DDX11-203ENST00000415475 TDRD9Q8NDG6 1382 aaKnown RBP20.95■□□□□ 0.94
DDX11-203ENST00000415475 SOGA1O94964 1423 aa20.95■□□□□ 0.94
DDX11-203ENST00000415475 FGD5Q6ZNL6 1462 aa20.93■□□□□ 0.94
DDX11-203ENST00000415475 SNAPC4Q5SXM2 1469 aa20.91■□□□□ 0.94
DDX11-203ENST00000415475 WDR97A6NE52 1622 aa20.89■□□□□ 0.94
DDX11-203ENST00000415475 CUX1P39880 1505 aa20.88■□□□□ 0.93
DDX11-203ENST00000415475 CLASP1Q7Z460 1538 aa20.88■□□□□ 0.93
DDX11-203ENST00000415475 TRHP20396 242 aaPredicted RBP20.85■□□□□ 0.93
DDX11-203ENST00000415475 MAGI1Q96QZ7 1491 aaPredicted RBP20.82■□□□□ 0.92
DDX11-203ENST00000415475 SYNJ1O43426 1573 aa20.82■□□□□ 0.92
DDX11-203ENST00000415475 GRIN2BQ13224 1484 aa20.8■□□□□ 0.92
DDX11-203ENST00000415475 PBRM1Q86U86 1689 aa20.79■□□□□ 0.92
DDX11-203ENST00000415475 CHMP7Q8WUX9 453 aaPredicted RBP20.78■□□□□ 0.92
DDX11-203ENST00000415475 WRNQ14191 1432 aaPredicted RBP eCLIP20.78■□□□□ 0.92
DDX11-203ENST00000415475 SYNJ2O15056 1496 aa20.76■□□□□ 0.91
DDX11-203ENST00000415475 GAPVD1Q14C86 1478 aa20.7■□□□□ 0.9
DDX11-203ENST00000415475 ABCA5Q8WWZ7 1642 aa20.69■□□□□ 0.9
DDX11-203ENST00000415475 TOP2BQ02880 1626 aa20.67■□□□□ 0.9
DDX11-203ENST00000415475 ABCA10Q8WWZ4 1543 aa20.66■□□□□ 0.9
DDX11-203ENST00000415475 BIVM-ERCC5R4GMW8 1640 aa20.64■□□□□ 0.9
DDX11-203ENST00000415475 ERCC6L2Q5T890 1561 aa20.57■□□□□ 0.88
DDX11-203ENST00000415475 ADAMTS12P58397 1594 aa20.55■□□□□ 0.88
DDX11-203ENST00000415475 GRIN2AQ12879 1464 aa20.55■□□□□ 0.88
DDX11-203ENST00000415475 FOXD1Q16676 465 aa20.53■□□□□ 0.88
DDX11-203ENST00000415475 CEP170Q5SW79 1584 aa20.52■□□□□ 0.88
DDX11-203ENST00000415475 NUP160Q12769 1436 aa20.49■□□□□ 0.87
DDX11-203ENST00000415475 SHROOM2Q13796 1616 aa20.45■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms