RNA–Protein interactions for RNA: ENST00000543756.5

DDX11-226, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 3

Gene DDX11, Length 613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-226ENST00000543756 NISCHQ9Y2I1 1504 aa41.47■■■■■ 4.23
DDX11-226ENST00000543756 CCDC180Q9P1Z9 1646 aa36.74■■■■□ 3.47
DDX11-226ENST00000543756 ABCC9O60706 1549 aa35.47■■■■□ 3.27
DDX11-226ENST00000543756 ZCCHC6Q5VYS8 1495 aaKnown RBP34.64■■■■□ 3.14
DDX11-226ENST00000543756 MYO15BQ96JP2 1530 aa34.49■■■■□ 3.11
DDX11-226ENST00000543756 NACADO15069 1562 aa34.47■■■■□ 3.11
DDX11-226ENST00000543756 DCAF1Q9Y4B6 1507 aa34.43■■■■□ 3.1
DDX11-226ENST00000543756 RB1CC1Q8TDY2 1594 aa34.39■■■■□ 3.1
DDX11-226ENST00000543756 DCAF8L2P0C7V8 631 aa34.3■■■■□ 3.08
DDX11-226ENST00000543756 UNC13AQ9UPW8 1703 aa33.49■■■□□ 2.95
DDX11-226ENST00000543756 SCRIBQ14160 1630 aa33.42■■■□□ 2.94
DDX11-226ENST00000543756 BICRAQ9NZM4 1560 aa33.3■■■□□ 2.92
DDX11-226ENST00000543756 PABPN1Q86U42 306 aaKnown RBP eCLIP33.17■■■□□ 2.9
DDX11-226ENST00000543756 SHROOM4Q9ULL8 1493 aa33.17■■■□□ 2.9
DDX11-226ENST00000543756 EIF4G1Q04637 1599 aaKnown RBP32.41■■■□□ 2.78
DDX11-226ENST00000543756 DNAJC5BQ9UF47 199 aa32.22■■■□□ 2.75
DDX11-226ENST00000543756 CECR2Q9BXF3 1484 aa32.19■■■□□ 2.74
DDX11-226ENST00000543756 CC2D2AQ9P2K1 1620 aa32.15■■■□□ 2.74
DDX11-226ENST00000543756 BAZ1AQ9NRL2 1556 aaPredicted RBP32.13■■■□□ 2.73
DDX11-226ENST00000543756 SMARCA4P51532 1647 aa32.08■■■□□ 2.73
DDX11-226ENST00000543756 MROH2BQ7Z745 1585 aa31.91■■■□□ 2.7
DDX11-226ENST00000543756 PEG3Q9GZU2 1588 aa31.85■■■□□ 2.69
DDX11-226ENST00000543756 SMARCA2P51531 1590 aa31.84■■■□□ 2.69
DDX11-226ENST00000543756 ATAD2BQ9ULI0 1458 aa31.84■■■□□ 2.69
DDX11-226ENST00000543756 NCAPD3P42695 1498 aa31.81■■■□□ 2.68
DDX11-226ENST00000543756 RSF1Q96T23 1441 aaPredicted RBP31.71■■■□□ 2.67
DDX11-226ENST00000543756 HMGXB3Q12766 1538 aa31.7■■■□□ 2.66
DDX11-226ENST00000543756 BAZ1BQ9UIG0 1483 aaKnown RBP31.58■■■□□ 2.65
DDX11-226ENST00000543756 WIZO95785 1651 aa31.54■■■□□ 2.64
DDX11-226ENST00000543756 TOP2AP11388 1531 aaKnown RBP31.32■■■□□ 2.6
DDX11-226ENST00000543756 SUPT5HO00267 1087 aaKnown RBP31.01■■■□□ 2.55
DDX11-226ENST00000543756 CCDC88BA6NC98 1476 aa30.92■■■□□ 2.54
DDX11-226ENST00000543756 LAMC3Q9Y6N6 1575 aa30.89■■■□□ 2.54
DDX11-226ENST00000543756 CADPSQ9ULU8 1353 aa30.88■■■□□ 2.53
DDX11-226ENST00000543756 NESP48681 1621 aa30.8■■■□□ 2.52
DDX11-226ENST00000543756 CFTRP13569 1480 aa30.78■■■□□ 2.52
DDX11-226ENST00000543756 PDS5BQ9NTI5 1447 aa30.67■■■□□ 2.5
DDX11-226ENST00000543756 ERCC6Q03468 1493 aa30.58■■■□□ 2.49
DDX11-226ENST00000543756 PRDM2Q13029 1718 aa30.5■■■□□ 2.47
DDX11-226ENST00000543756 FANCD2Q9BXW9 1451 aa30.48■■■□□ 2.47
DDX11-226ENST00000543756 KIF21AQ7Z4S6 1674 aa30.44■■■□□ 2.46
DDX11-226ENST00000543756 CEP164Q9UPV0 1460 aa30.42■■■□□ 2.46
DDX11-226ENST00000543756 THOC2Q8NI27 1593 aaKnown RBP30.32■■■□□ 2.45
DDX11-226ENST00000543756 MRC2Q9UBG0 1479 aa30.31■■■□□ 2.44
DDX11-226ENST00000543756 CUX2O14529 1486 aa30.23■■■□□ 2.43
DDX11-226ENST00000543756 WDR62O43379 1518 aa30.22■■■□□ 2.43
DDX11-226ENST00000543756 URB2Q14146 1524 aaKnown RBP30.15■■■□□ 2.42
DDX11-226ENST00000543756 ABCC8Q09428 1581 aa30.13■■■□□ 2.41
DDX11-226ENST00000543756 DNMBPQ6XZF7 1577 aa30.05■■■□□ 2.4
DDX11-226ENST00000543756 TOPBP1Q92547 1522 aa30.03■■■□□ 2.4
DDX11-226ENST00000543756 CUX1P39880 1505 aa29.92■■■□□ 2.38
DDX11-226ENST00000543756 WRNQ14191 1432 aaPredicted RBP eCLIP29.88■■■□□ 2.37
DDX11-226ENST00000543756 POLA1P09884 1462 aaPredicted RBP29.81■■■□□ 2.36
DDX11-226ENST00000543756 TOP2BQ02880 1626 aa29.8■■■□□ 2.36
DDX11-226ENST00000543756 IFT140Q96RY7 1462 aa29.8■■■□□ 2.36
DDX11-226ENST00000543756 BIVM-ERCC5R4GMW8 1640 aa29.78■■■□□ 2.36
DDX11-226ENST00000543756 FGD5Q6ZNL6 1462 aa29.76■■■□□ 2.35
DDX11-226ENST00000543756 SYNJ1O43426 1573 aa29.75■■■□□ 2.35
DDX11-226ENST00000543756 TARBP1Q13395 1621 aaKnown RBP29.68■■■□□ 2.34
DDX11-226ENST00000543756 SOGA1O94964 1423 aa29.68■■■□□ 2.34
DDX11-226ENST00000543756 RAD54L2Q9Y4B4 1467 aa29.61■■■□□ 2.33
DDX11-226ENST00000543756 WDR97A6NE52 1622 aa29.58■■■□□ 2.33
DDX11-226ENST00000543756 ABCA10Q8WWZ4 1543 aa29.55■■■□□ 2.32
DDX11-226ENST00000543756 ZNF608Q9ULD9 1512 aaPredicted RBP29.55■■■□□ 2.32
DDX11-226ENST00000543756 EIF4G3O43432 1585 aaKnown RBP29.47■■■□□ 2.31
DDX11-226ENST00000543756 TDRD9Q8NDG6 1382 aaKnown RBP29.43■■■□□ 2.3
DDX11-226ENST00000543756 AQRO60306 1485 aaKnown RBP eCLIP29.42■■■□□ 2.31e-9■■■■■ 30.7
DDX11-226ENST00000543756 ABCA5Q8WWZ7 1642 aa29.38■■■□□ 2.29
DDX11-226ENST00000543756 TRIM41Q8WV44 630 aa29.36■■■□□ 2.29
DDX11-226ENST00000543756 GAPVD1Q14C86 1478 aa29.36■■■□□ 2.29
DDX11-226ENST00000543756 GRIN2BQ13224 1484 aa29.33■■■□□ 2.29
DDX11-226ENST00000543756 KIF27Q86VH2 1401 aa29.25■■■□□ 2.27
DDX11-226ENST00000543756 CHIC1Q5VXU3 224 aa29.24■■■□□ 2.27
DDX11-226ENST00000543756 MAGI1Q96QZ7 1491 aaPredicted RBP29.23■■■□□ 2.27
DDX11-226ENST00000543756 ERICH3Q5RHP9 1530 aa29.22■■■□□ 2.27
DDX11-226ENST00000543756 PBRM1Q86U86 1689 aa29.21■■■□□ 2.27
DDX11-226ENST00000543756 SNAPC4Q5SXM2 1469 aa29.19■■■□□ 2.26
DDX11-226ENST00000543756 SYNJ2O15056 1496 aa29.1■■■□□ 2.25
DDX11-226ENST00000543756 IGF1RP08069 1367 aa29.08■■■□□ 2.25
DDX11-226ENST00000543756 ADAMTS12P58397 1594 aa29.06■■■□□ 2.24
DDX11-226ENST00000543756 FHAD1B1AJZ9 1412 aa29.06■■■□□ 2.24
DDX11-226ENST00000543756 CUL7Q14999 1698 aa28.99■■■□□ 2.23
DDX11-226ENST00000543756 CHMP7Q8WUX9 453 aaPredicted RBP28.99■■■□□ 2.23
DDX11-226ENST00000543756 EEA1Q15075 1411 aa28.99■■■□□ 2.23
DDX11-226ENST00000543756 RUSC2Q8N2Y8 1516 aa28.99■■■□□ 2.23
DDX11-226ENST00000543756 OSCARQ8IYS5 282 aa28.98■■■□□ 2.23
DDX11-226ENST00000543756 CHD1O14646 1710 aa28.97■■■□□ 2.23
DDX11-226ENST00000543756 GRIN2AQ12879 1464 aa28.94■■■□□ 2.22
DDX11-226ENST00000543756 FBLN2P98095 1184 aa28.94■■■□□ 2.22
DDX11-226ENST00000543756 CARMIL1Q5VZK9 1371 aa28.89■■■□□ 2.22
DDX11-226ENST00000543756 NUP160Q12769 1436 aa28.83■■■□□ 2.21
DDX11-226ENST00000543756 DNAJC5Q9H3Z4 198 aa28.82■■■□□ 2.2
DDX11-226ENST00000543756 PRXQ9BXM0 1461 aa28.8■■■□□ 2.2
DDX11-226ENST00000543756 CSRNP3Q8WYN3 585 aa28.8■■■□□ 2.2
DDX11-226ENST00000543756 RAPGEF2Q9Y4G8 1499 aa28.78■■■□□ 2.2
DDX11-226ENST00000543756 CLASP1Q7Z460 1538 aa28.77■■■□□ 2.2
DDX11-226ENST00000543756 CEP170Q5SW79 1584 aa28.74■■■□□ 2.19
DDX11-226ENST00000543756 KIAA0586Q9BVV6 1533 aa28.64■■■□□ 2.17
DDX11-226ENST00000543756 FAM9AQ8IZU1 332 aaPredicted RBP28.61■■■□□ 2.17
DDX11-226ENST00000543756 KIF21BO75037 1637 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms