RNA–Protein interactions for RNA: ENST00000373635.8

PSMD1-202, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 5 BASIC

Gene PSMD1, Length 3,230 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-202ENST00000373635 NISCHQ9Y2I1 1504 aa25.49■■□□□ 1.67
PSMD1-202ENST00000373635 SHROOM4Q9ULL8 1493 aa22.09■■□□□ 1.13
PSMD1-202ENST00000373635 DCAF8L2P0C7V8 631 aa21.81■■□□□ 1.08
PSMD1-202ENST00000373635 SUPT5HO00267 1087 aaKnown RBP21.63■■□□□ 1.05
PSMD1-202ENST00000373635 CCDC180Q9P1Z9 1646 aa21.53■■□□□ 1.04
PSMD1-202ENST00000373635 ZCCHC6Q5VYS8 1495 aaKnown RBP21.48■■□□□ 1.03
PSMD1-202ENST00000373635 CHIC1Q5VXU3 224 aa20.72■□□□□ 0.91
PSMD1-202ENST00000373635 DCAF1Q9Y4B6 1507 aa20.71■□□□□ 0.91
PSMD1-202ENST00000373635 ABCC9O60706 1549 aa20.55■□□□□ 0.88
PSMD1-202ENST00000373635 MYO15BQ96JP2 1530 aa20.53■□□□□ 0.88
PSMD1-202ENST00000373635 SCRIBQ14160 1630 aa20.49■□□□□ 0.87
PSMD1-202ENST00000373635 LOC105371045A0A1W2PR82 267 aa20.27■□□□□ 0.84
PSMD1-202ENST00000373635 RSF1Q96T23 1441 aaPredicted RBP20.2■□□□□ 0.82
PSMD1-202ENST00000373635 PCGF6Q9BYE7 350 aa20.1■□□□□ 0.81
PSMD1-202ENST00000373635 FAM9AQ8IZU1 332 aaPredicted RBP20.07■□□□□ 0.8
PSMD1-202ENST00000373635 EHMT2Q96KQ7 1210 aa20.07■□□□□ 0.8
PSMD1-202ENST00000373635 NACADO15069 1562 aa20.06■□□□□ 0.8
PSMD1-202ENST00000373635 CECR2Q9BXF3 1484 aa20.05■□□□□ 0.8
PSMD1-202ENST00000373635 TRIM41Q8WV44 630 aa20.03■□□□□ 0.8
PSMD1-202ENST00000373635 RB1CC1Q8TDY2 1594 aa19.96■□□□□ 0.79
PSMD1-202ENST00000373635 MROH2BQ7Z745 1585 aa19.9■□□□□ 0.78
PSMD1-202ENST00000373635 HRCP23327 699 aa19.79■□□□□ 0.76
PSMD1-202ENST00000373635 PABPN1Q86U42 306 aaKnown RBP eCLIP19.78■□□□□ 0.76
PSMD1-202ENST00000373635 WIZO95785 1651 aa19.77■□□□□ 0.76
PSMD1-202ENST00000373635 PPARGC1BQ86YN6 1023 aaKnown RBP19.63■□□□□ 0.73
PSMD1-202ENST00000373635 BAZ1AQ9NRL2 1556 aaPredicted RBP19.58■□□□□ 0.72
PSMD1-202ENST00000373635 TRIM26Q12899 539 aaPredicted RBP19.57■□□□□ 0.72
PSMD1-202ENST00000373635 UNC13AQ9UPW8 1703 aa19.44■□□□□ 0.7
PSMD1-202ENST00000373635 SMARCA4P51532 1647 aa19.42■□□□□ 0.7
PSMD1-202ENST00000373635 CCDC88BA6NC98 1476 aa19.4■□□□□ 0.7
PSMD1-202ENST00000373635 ABCC8Q09428 1581 aa19.37■□□□□ 0.69
PSMD1-202ENST00000373635 TOP2AP11388 1531 aaKnown RBP19.35■□□□□ 0.69
PSMD1-202ENST00000373635 TTBK1Q5TCY1 1321 aaPredicted RBP19.34■□□□□ 0.69
PSMD1-202ENST00000373635 SMARCA2P51531 1590 aa19.27■□□□□ 0.68
PSMD1-202ENST00000373635 BICRAQ9NZM4 1560 aa19.27■□□□□ 0.68
PSMD1-202ENST00000373635 EIF4G1Q04637 1599 aaKnown RBP19.21■□□□□ 0.67
PSMD1-202ENST00000373635 SOGA1O94964 1423 aa19.19■□□□□ 0.66
PSMD1-202ENST00000373635 UBTFP17480 764 aaKnown RBP19.19■□□□□ 0.66
PSMD1-202ENST00000373635 RUSC2Q8N2Y8 1516 aa19.11■□□□□ 0.65
PSMD1-202ENST00000373635 CSRNP3Q8WYN3 585 aa19.1■□□□□ 0.65
PSMD1-202ENST00000373635 RANGAP1P46060 587 aaPredicted RBP19.07■□□□□ 0.64
PSMD1-202ENST00000373635 ATAD2BQ9ULI0 1458 aa19.04■□□□□ 0.64
PSMD1-202ENST00000373635 BAZ1BQ9UIG0 1483 aaKnown RBP19.03■□□□□ 0.64
PSMD1-202ENST00000373635 WRNQ14191 1432 aaPredicted RBP eCLIP19.03■□□□□ 0.64
PSMD1-202ENST00000373635 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.01■□□□□ 0.63
PSMD1-202ENST00000373635 ZEB1P37275 1124 aaPredicted RBP18.99■□□□□ 0.63
PSMD1-202ENST00000373635 CEP162Q5TB80 1403 aa18.98■□□□□ 0.63
PSMD1-202ENST00000373635 CCER1Q8TC90 406 aaPredicted RBP18.93■□□□□ 0.62
PSMD1-202ENST00000373635 PEG3Q9GZU2 1588 aa18.91■□□□□ 0.62
PSMD1-202ENST00000373635 TNIKQ9UKE5 1360 aa18.89■□□□□ 0.61
PSMD1-202ENST00000373635 SYNJ1O43426 1573 aa18.86■□□□□ 0.61
PSMD1-202ENST00000373635 EEA1Q15075 1411 aa18.85■□□□□ 0.61
PSMD1-202ENST00000373635 GOLGA3Q08378 1498 aa18.82■□□□□ 0.6
PSMD1-202ENST00000373635 CEP164Q9UPV0 1460 aa18.71■□□□□ 0.59
PSMD1-202ENST00000373635 HNRNPUL2Q1KMD3 747 aaKnown RBP18.71■□□□□ 0.59
PSMD1-202ENST00000373635 APLP2Q06481 763 aa18.7■□□□□ 0.58
PSMD1-202ENST00000373635 CLIP1P30622 1438 aa18.69■□□□□ 0.58
PSMD1-202ENST00000373635 RAPGEF2Q9Y4G8 1499 aa18.69■□□□□ 0.58
PSMD1-202ENST00000373635 NCAPD3P42695 1498 aa18.63■□□□□ 0.57
PSMD1-202ENST00000373635 TOP2BQ02880 1626 aa18.55■□□□□ 0.56
PSMD1-202ENST00000373635 KIF21BO75037 1637 aa18.55■□□□□ 0.56
PSMD1-202ENST00000373635 HMGXB3Q12766 1538 aa18.53■□□□□ 0.56
PSMD1-202ENST00000373635 VPS8Q8N3P4 1428 aa18.5■□□□□ 0.55
PSMD1-202ENST00000373635 CUX1P39880 1505 aa18.5■□□□□ 0.55
PSMD1-202ENST00000373635 CFTRP13569 1480 aa18.46■□□□□ 0.55
PSMD1-202ENST00000373635 KIF27Q86VH2 1401 aa18.45■□□□□ 0.54
PSMD1-202ENST00000373635 BIVM-ERCC5R4GMW8 1640 aa18.41■□□□□ 0.54
PSMD1-202ENST00000373635 KANK4Q5T7N3 995 aaPredicted RBP18.4■□□□□ 0.54
PSMD1-202ENST00000373635 PRXQ9BXM0 1461 aa18.39■□□□□ 0.53
PSMD1-202ENST00000373635 DIEXFQ68CQ4 756 aaKnown RBP18.38■□□□□ 0.53
PSMD1-202ENST00000373635 CADPSQ9ULU8 1353 aa18.38■□□□□ 0.53
PSMD1-202ENST00000373635 CUX2O14529 1486 aa18.37■□□□□ 0.53
PSMD1-202ENST00000373635 ITGAEP38570 1179 aa18.36■□□□□ 0.53
PSMD1-202ENST00000373635 ATP1B4Q9UN42 357 aaPredicted RBP18.34■□□□□ 0.53
PSMD1-202ENST00000373635 P3H3Q8IVL6 736 aa18.34■□□□□ 0.53
PSMD1-202ENST00000373635 CC2D2AQ9P2K1 1620 aa18.31■□□□□ 0.52
PSMD1-202ENST00000373635 ARAP1Q96P48 1450 aa18.3■□□□□ 0.52
PSMD1-202ENST00000373635 ERICH3Q5RHP9 1530 aa18.28■□□□□ 0.52
PSMD1-202ENST00000373635 IGF1RP08069 1367 aa18.27■□□□□ 0.52
PSMD1-202ENST00000373635 FGD5Q6ZNL6 1462 aa18.26■□□□□ 0.51
PSMD1-202ENST00000373635 CARMIL1Q5VZK9 1371 aa18.23■□□□□ 0.51
PSMD1-202ENST00000373635 ZNF316A6NFI3 1004 aaPredicted RBP18.23■□□□□ 0.51
PSMD1-202ENST00000373635 NESP48681 1621 aa18.23■□□□□ 0.51
PSMD1-202ENST00000373635 DNAJC5BQ9UF47 199 aa18.22■□□□□ 0.51
PSMD1-202ENST00000373635 FANCD2Q9BXW9 1451 aa18.21■□□□□ 0.51
PSMD1-202ENST00000373635 ARHGAP35Q9NRY4 1499 aa18.19■□□□□ 0.5
PSMD1-202ENST00000373635 SCAF1Q9H7N4 1312 aaKnown RBP18.19■□□□□ 0.5
PSMD1-202ENST00000373635 RAD54L2Q9Y4B4 1467 aa18.18■□□□□ 0.5
PSMD1-202ENST00000373635 YTHDC1Q96MU7 727 aaKnown RBP18.16■□□□□ 0.5
PSMD1-202ENST00000373635 NEUROD1Q13562 356 aa18.12■□□□□ 0.49
PSMD1-202ENST00000373635 FAM50AQ14320 339 aaKnown RBP18.09■□□□□ 0.49
PSMD1-202ENST00000373635 PRDM2Q13029 1718 aa18.06■□□□□ 0.48
PSMD1-202ENST00000373635 CCNB3Q8WWL7 1395 aa18.06■□□□□ 0.48
PSMD1-202ENST00000373635 TDRD9Q8NDG6 1382 aaKnown RBP18.05■□□□□ 0.48
PSMD1-202ENST00000373635 ACIN1Q9UKV3 1341 aaKnown RBP18.05■□□□□ 0.48
PSMD1-202ENST00000373635 POLA1P09884 1462 aaPredicted RBP18.04■□□□□ 0.48
PSMD1-202ENST00000373635 DHX57Q6P158 1386 aaKnown RBP18.03■□□□□ 0.48
PSMD1-202ENST00000373635 MIER1Q8N108 512 aa18.03■□□□□ 0.48
PSMD1-202ENST00000373635 TOPBP1Q92547 1522 aa18.03■□□□□ 0.48
PSMD1-202ENST00000373635 FHOD3Q2V2M9 1422 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms