Protein–RNA interactions for Protein: Q8IWS0

PHF6, PHD finger protein 6, humanhuman

Known RBP eCLIP

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF6Q8IWS0 SLC39A7-203ENST00000444757 1015 ntTSL 513.34□□□□□ -0.272e-6■■□□□ 14
PHF6Q8IWS0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.732e-6■■□□□ 14
PHF6Q8IWS0 GUK1-228ENST00000485168 737 ntTSL 319.52■□□□□ 0.722e-6■■□□□ 14
PHF6Q8IWS0 GUK1-231ENST00000485859 325 ntTSL 1 (best)18.76■□□□□ 0.592e-6■■□□□ 14
PHF6Q8IWS0 GUK1-237ENST00000495999 555 ntTSL 317.94■□□□□ 0.462e-6■■□□□ 14
PHF6Q8IWS0 GUK1-216ENST00000464858 633 ntTSL 317.47■□□□□ 0.392e-6■■□□□ 14
PHF6Q8IWS0 GUK1-232ENST00000486668 738 ntTSL 315.73■□□□□ 0.112e-6■■□□□ 14
PHF6Q8IWS0 GUK1-223ENST00000478725 414 ntTSL 315.58■□□□□ 0.082e-6■■□□□ 14
PHF6Q8IWS0 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.47□□□□□ -0.092e-9■■□□□ 13.9
PHF6Q8IWS0 PPP2R5C-227ENST00000557268 2013 ntTSL 213.69□□□□□ -0.222e-9■■□□□ 13.9
PHF6Q8IWS0 PPP2R5C-212ENST00000554442 800 ntTSL 1 (best) BASIC11.29□□□□□ -0.62e-9■■□□□ 13.9
PHF6Q8IWS0 PPP2R5C-201ENST00000328724 4045 ntTSL 2 BASIC8.97□□□□□ -0.972e-9■■□□□ 13.9
PHF6Q8IWS0 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC7.72□□□□□ -1.172e-9■■□□□ 13.9
PHF6Q8IWS0 PPP2R5C-215ENST00000556068 3363 ntTSL 26.82□□□□□ -1.322e-9■■□□□ 13.9
PHF6Q8IWS0 LINC02001-201ENST00000592381 1298 ntTSL 216.03■□□□□ 0.164e-63■■□□□ 13.8
PHF6Q8IWS0 LINC02001-202ENST00000638682 1504 ntTSL 5 BASIC11.64□□□□□ -0.554e-63■■□□□ 13.8
PHF6Q8IWS0 EHBP1L1-211ENST00000634639 1643 ntTSL 525.27■■□□□ 1.646e-6■■□□□ 13.8
PHF6Q8IWS0 EHBP1L1-208ENST00000533237 2267 ntTSL 524.38■■□□□ 1.496e-6■■□□□ 13.8
PHF6Q8IWS0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.996e-6■■□□□ 13.8
PHF6Q8IWS0 AC092127.1-201ENST00000567093 3455 ntBASIC15.08■□□□□ 01e-6■■□□□ 13.7
PHF6Q8IWS0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.343e-13■■□□□ 13.7
PHF6Q8IWS0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.283e-13■■□□□ 13.7
PHF6Q8IWS0 VEGFA-220ENST00000519767 970 ntTSL 1 (best)29.27■■■□□ 2.283e-13■■□□□ 13.7
PHF6Q8IWS0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC29.07■■■□□ 2.243e-13■■□□□ 13.7
PHF6Q8IWS0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.193e-13■■□□□ 13.7
PHF6Q8IWS0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.72■■■□□ 2.193e-13■■□□□ 13.7
PHF6Q8IWS0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.72■■■□□ 2.193e-13■■□□□ 13.7
PHF6Q8IWS0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.72■■■□□ 2.193e-13■■□□□ 13.7
PHF6Q8IWS0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.193e-13■■□□□ 13.7
PHF6Q8IWS0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.72■■■□□ 2.193e-13■■□□□ 13.7
PHF6Q8IWS0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.72■■■□□ 2.193e-13■■□□□ 13.7
PHF6Q8IWS0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.72■■■□□ 2.193e-13■■□□□ 13.7
PHF6Q8IWS0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.193e-13■■□□□ 13.7
PHF6Q8IWS0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.753e-13■■□□□ 13.7
PHF6Q8IWS0 ARFGAP1-214ENST00000520485 1548 ntTSL 223.47■■□□□ 1.351e-8■■□□□ 13.7
PHF6Q8IWS0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.95■□□□□ 0.943e-13■■□□□ 13.7
PHF6Q8IWS0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.7■□□□□ 0.743e-13■■□□□ 13.7
PHF6Q8IWS0 ARFGAP1-211ENST00000519531 1490 ntTSL 319.09■□□□□ 0.651e-8■■□□□ 13.7
PHF6Q8IWS0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.01■□□□□ 0.471e-8■■□□□ 13.7
PHF6Q8IWS0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.01■□□□□ 0.473e-13■■□□□ 13.7
PHF6Q8IWS0 ARFGAP1-215ENST00000522403 995 ntTSL 517.53■□□□□ 0.41e-8■■□□□ 13.7
PHF6Q8IWS0 ARFGAP1-219ENST00000524192 980 ntTSL 217.52■□□□□ 0.41e-8■■□□□ 13.7
PHF6Q8IWS0 ARFGAP1-221ENST00000549047 1040 ntTSL 517.32■□□□□ 0.361e-8■■□□□ 13.7
PHF6Q8IWS0 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.311e-8■■□□□ 13.7
PHF6Q8IWS0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.263e-13■■□□□ 13.7
PHF6Q8IWS0 ARFGAP1-218ENST00000523460 572 ntTSL 416.56■□□□□ 0.241e-8■■□□□ 13.7
PHF6Q8IWS0 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.43■□□□□ 0.061e-8■■□□□ 13.7
PHF6Q8IWS0 ARFGAP1-206ENST00000518601 905 ntTSL 515.39■□□□□ 0.051e-8■■□□□ 13.7
PHF6Q8IWS0 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC15.1■□□□□ 0.013e-13■■□□□ 13.7
PHF6Q8IWS0 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC14.8□□□□□ -0.043e-13■■□□□ 13.7
PHF6Q8IWS0 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.77□□□□□ -0.041e-8■■□□□ 13.7
PHF6Q8IWS0 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.091e-8■■□□□ 13.7
PHF6Q8IWS0 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC14.16□□□□□ -0.143e-13■■□□□ 13.7
PHF6Q8IWS0 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC14.16□□□□□ -0.143e-13■■□□□ 13.7
PHF6Q8IWS0 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.143e-13■■□□□ 13.7
PHF6Q8IWS0 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.191e-8■■□□□ 13.7
PHF6Q8IWS0 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC13.77□□□□□ -0.213e-13■■□□□ 13.7
PHF6Q8IWS0 VEGFA-225ENST00000523950 954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.233e-13■■□□□ 13.7
PHF6Q8IWS0 ARFGAP1-223ENST00000550188 572 ntTSL 513.23□□□□□ -0.291e-8■■□□□ 13.7
PHF6Q8IWS0 CNOT6L-208ENST00000515506 4024 ntTSL 59.46□□□□□ -0.891e-8■■□□□ 13.7
PHF6Q8IWS0 VEGFA-212ENST00000480614 12167 ntTSL 1 (best)9.05□□□□□ -0.963e-13■■□□□ 13.7
PHF6Q8IWS0 MFGE8-214ENST00000560937 801 ntTSL 218.84■□□□□ 0.613e-6■■□□□ 13.7
PHF6Q8IWS0 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.242e-38■■□□□ 13.7
PHF6Q8IWS0 TMEM107-205ENST00000449985 1210 ntTSL 1 (best) BASIC12.18□□□□□ -0.461e-30■■□□□ 13.6
PHF6Q8IWS0 RPS3-213ENST00000529285 550 ntTSL 521.64■■□□□ 1.056e-70■■□□□ 13.6
PHF6Q8IWS0 RPS3-206ENST00000526248 771 ntTSL 518.04■□□□□ 0.486e-70■■□□□ 13.6
PHF6Q8IWS0 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.16■□□□□ 0.346e-70■■□□□ 13.6
PHF6Q8IWS0 RPS3-218ENST00000532872 737 ntTSL 314.86□□□□□ -0.036e-70■■□□□ 13.6
PHF6Q8IWS0 RPS3-216ENST00000530721 796 ntTSL 314.86□□□□□ -0.036e-70■■□□□ 13.6
PHF6Q8IWS0 RPS3-209ENST00000527446 1306 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.36e-70■■□□□ 13.6
PHF6Q8IWS0 RPS3-212ENST00000529173 1373 ntTSL 512.68□□□□□ -0.386e-70■■□□□ 13.6
PHF6Q8IWS0 RPS3-217ENST00000531188 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.566e-70■■□□□ 13.6
PHF6Q8IWS0 RPS3-207ENST00000526608 710 ntTSL 5 BASIC11.45□□□□□ -0.586e-70■■□□□ 13.6
PHF6Q8IWS0 RPS3-202ENST00000422465 903 ntTSL 211.42□□□□□ -0.586e-70■■□□□ 13.6
PHF6Q8IWS0 RPS3-203ENST00000524851 866 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.596e-70■■□□□ 13.6
PHF6Q8IWS0 RPS3-219ENST00000534440 564 ntTSL 2 BASIC10.83□□□□□ -0.686e-70■■□□□ 13.6
PHF6Q8IWS0 RPS3-210ENST00000528439 473 ntTSL 310.04□□□□□ -0.86e-70■■□□□ 13.6
PHF6Q8IWS0 RPL7A-208ENST00000492798 374 ntTSL 1 (best)8.12□□□□□ -1.112e-66■■□□□ 13.6
PHF6Q8IWS0 SNORD36C-201ENST00000516733 66 ntBASIC2.79□□□□□ -1.962e-66■■□□□ 13.6
PHF6Q8IWS0 CD164-209ENST00000512212 590 ntTSL 214.89□□□□□ -0.032e-12■■□□□ 13.5
PHF6Q8IWS0 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.89□□□□□ -0.032e-12■■□□□ 13.5
PHF6Q8IWS0 CD164-204ENST00000413644 2414 ntTSL 1 (best) BASIC11.62□□□□□ -0.552e-12■■□□□ 13.5
PHF6Q8IWS0 CD164-202ENST00000310786 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.852e-12■■□□□ 13.5
PHF6Q8IWS0 CD164-203ENST00000324953 2936 ntTSL 1 (best) BASIC9.34□□□□□ -0.912e-12■■□□□ 13.5
PHF6Q8IWS0 CD164-201ENST00000275080 2954 ntTSL 1 (best) BASIC8.7□□□□□ -1.022e-12■■□□□ 13.5
PHF6Q8IWS0 HSPA9-210ENST00000508003 582 ntTSL 212.92□□□□□ -0.341e-84■■□□□ 13.4
PHF6Q8IWS0 SNORD63-201ENST00000384262 68 ntBASIC4.24□□□□□ -1.731e-84■■□□□ 13.4
PHF6Q8IWS0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.219e-7■■□□□ 13.4
PHF6Q8IWS0 YWHAZ-215ENST00000518736 883 ntTSL 322.55■■□□□ 1.29e-7■■□□□ 13.4
PHF6Q8IWS0 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.19e-7■■□□□ 13.4
PHF6Q8IWS0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.889e-7■■□□□ 13.4
PHF6Q8IWS0 YWHAZ-217ENST00000521328 511 ntTSL 512.18□□□□□ -0.469e-7■■□□□ 13.4
PHF6Q8IWS0 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC8.06□□□□□ -1.121e-28■■□□□ 13.4
PHF6Q8IWS0 CCAR1-207ENST00000536012 2447 ntTSL 1 (best)7.49□□□□□ -1.211e-28■■□□□ 13.4
PHF6Q8IWS0 CCAR1-214ENST00000543225 2407 ntTSL 1 (best)6.82□□□□□ -1.321e-28■■□□□ 13.4
PHF6Q8IWS0 CCAR1-213ENST00000541012 2432 ntTSL 1 (best)6.48□□□□□ -1.371e-28■■□□□ 13.4
PHF6Q8IWS0 CCAR1-215ENST00000543229 2475 ntTSL 26.48□□□□□ -1.371e-28■■□□□ 13.4
PHF6Q8IWS0 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.32□□□□□ -1.41e-28■■□□□ 13.4
PHF6Q8IWS0 CCAR1-205ENST00000483264 487 ntTSL 56.23□□□□□ -1.411e-28■■□□□ 13.4
PHF6Q8IWS0 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.421e-28■■□□□ 13.4
Retrieved 100 of 4,170 protein–RNA pairs in 81 ms