RNA–Protein interactions for RNA: ENST00000324953.9

CD164-203, Transcript of CD164 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD164, Length 2,936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD164-203ENST00000324953 NISCHQ9Y2I1 1504 aa18.32■□□□□ 0.52
CD164-203ENST00000324953 HRCP23327 699 aa16.25■□□□□ 0.19
CD164-203ENST00000324953 PELP1Q8IZL8 1130 aaKnown RBP15.86■□□□□ 0.13
CD164-203ENST00000324953 MYO15BQ96JP2 1530 aa15.82■□□□□ 0.12
CD164-203ENST00000324953 PPARGC1BQ86YN6 1023 aaKnown RBP15.81■□□□□ 0.12
CD164-203ENST00000324953 PCGF6Q9BYE7 350 aa15.75■□□□□ 0.11
CD164-203ENST00000324953 SHROOM4Q9ULL8 1493 aa15.72■□□□□ 0.11
CD164-203ENST00000324953 SUPT5HO00267 1087 aaKnown RBP15.67■□□□□ 0.1
CD164-203ENST00000324953 CCDC180Q9P1Z9 1646 aa15.66■□□□□ 0.1
CD164-203ENST00000324953 CHIC1Q5VXU3 224 aa15.61■□□□□ 0.09
CD164-203ENST00000324953 DCAF1Q9Y4B6 1507 aa15.57■□□□□ 0.08
CD164-203ENST00000324953 ZCCHC6Q5VYS8 1495 aaKnown RBP15.51■□□□□ 0.07
CD164-203ENST00000324953 SCAF1Q9H7N4 1312 aaKnown RBP15.42■□□□□ 0.06
CD164-203ENST00000324953 TRIM26Q12899 539 aaPredicted RBP15.3■□□□□ 0.04
CD164-203ENST00000324953 MYT1Q01538 1121 aa15.29■□□□□ 0.04
CD164-203ENST00000324953 ZEB1P37275 1124 aaPredicted RBP15.24■□□□□ 0.03
CD164-203ENST00000324953 LOC105371045A0A1W2PR82 267 aa15.16■□□□□ 0.02
CD164-203ENST00000324953 ACIN1Q9UKV3 1341 aaKnown RBP15.01□□□□□ -0.01
CD164-203ENST00000324953 DCAF8L2P0C7V8 631 aa14.97□□□□□ -0.01
CD164-203ENST00000324953 NEUROD1Q13562 356 aa14.93□□□□□ -0.02
CD164-203ENST00000324953 GTF3C3Q9Y5Q9 886 aa14.83□□□□□ -0.03
CD164-203ENST00000324953 CENPBP07199 599 aaPredicted RBP14.75□□□□□ -0.05
CD164-203ENST00000324953 DIEXFQ68CQ4 756 aaKnown RBP14.65□□□□□ -0.06
CD164-203ENST00000324953 ABCC9O60706 1549 aa14.63□□□□□ -0.07
CD164-203ENST00000324953 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.56□□□□□ -0.08
CD164-203ENST00000324953 TRIM41Q8WV44 630 aa14.54□□□□□ -0.08
CD164-203ENST00000324953 SCRIBQ14160 1630 aa14.53□□□□□ -0.08
CD164-203ENST00000324953 CCER1Q8TC90 406 aaPredicted RBP14.53□□□□□ -0.08
CD164-203ENST00000324953 NACADO15069 1562 aa14.46□□□□□ -0.1
CD164-203ENST00000324953 RSF1Q96T23 1441 aaPredicted RBP14.45□□□□□ -0.1
CD164-203ENST00000324953 FAM9AQ8IZU1 332 aaPredicted RBP14.45□□□□□ -0.1
CD164-203ENST00000324953 RB1CC1Q8TDY2 1594 aa14.42□□□□□ -0.1
CD164-203ENST00000324953 TTBK1Q5TCY1 1321 aaPredicted RBP14.4□□□□□ -0.1
CD164-203ENST00000324953 ZNF316A6NFI3 1004 aaPredicted RBP14.37□□□□□ -0.11
CD164-203ENST00000324953 YTHDC1Q96MU7 727 aaKnown RBP14.32□□□□□ -0.12
CD164-203ENST00000324953 EHMT2Q96KQ7 1210 aa14.31□□□□□ -0.12
CD164-203ENST00000324953 WRNQ14191 1432 aaPredicted RBP eCLIP14.28□□□□□ -0.123e-7■■□□□ 13.1
CD164-203ENST00000324953 MIER1Q8N108 512 aa14.27□□□□□ -0.13
CD164-203ENST00000324953 BCL11AQ9H165 835 aa14.23□□□□□ -0.13
CD164-203ENST00000324953 ANP32EQ9BTT0 268 aa14.21□□□□□ -0.14
CD164-203ENST00000324953 CLSPNQ9HAW4 1339 aa14.2□□□□□ -0.14
CD164-203ENST00000324953 CECR2Q9BXF3 1484 aa14.2□□□□□ -0.14
CD164-203ENST00000324953 MROH2BQ7Z745 1585 aa14.19□□□□□ -0.14
CD164-203ENST00000324953 SUPT16HQ9Y5B9 1047 aaKnown RBP14.14□□□□□ -0.15
CD164-203ENST00000324953 TSHZ2Q9NRE2 1034 aa14.12□□□□□ -0.15
CD164-203ENST00000324953 EIF4G1Q04637 1599 aaKnown RBP14.12□□□□□ -0.15
CD164-203ENST00000324953 WIZO95785 1651 aa14.1□□□□□ -0.15
CD164-203ENST00000324953 BAZ1AQ9NRL2 1556 aaPredicted RBP14.09□□□□□ -0.15
CD164-203ENST00000324953 CEP162Q5TB80 1403 aa14.08□□□□□ -0.15
CD164-203ENST00000324953 CSRNP3Q8WYN3 585 aa14.02□□□□□ -0.16
CD164-203ENST00000324953 TNIKQ9UKE5 1360 aa14□□□□□ -0.17
CD164-203ENST00000324953 TOP2AP11388 1531 aaKnown RBP13.95□□□□□ -0.18
CD164-203ENST00000324953 SMARCA4P51532 1647 aa13.95□□□□□ -0.18
CD164-203ENST00000324953 UNC13AQ9UPW8 1703 aa13.95□□□□□ -0.18
CD164-203ENST00000324953 CCDC88BA6NC98 1476 aa13.91□□□□□ -0.18
CD164-203ENST00000324953 ABCC8Q09428 1581 aa13.91□□□□□ -0.18
CD164-203ENST00000324953 SMARCA2P51531 1590 aa13.85□□□□□ -0.19
CD164-203ENST00000324953 SOGA1O94964 1423 aa13.85□□□□□ -0.19
CD164-203ENST00000324953 EEA1Q15075 1411 aa13.85□□□□□ -0.19
CD164-203ENST00000324953 HNRNPUL2Q1KMD3 747 aaKnown RBP13.84□□□□□ -0.19
CD164-203ENST00000324953 GOLGA3Q08378 1498 aa13.81□□□□□ -0.2
CD164-203ENST00000324953 BICRAQ9NZM4 1560 aa13.78□□□□□ -0.2
CD164-203ENST00000324953 RUSC2Q8N2Y8 1516 aa13.77□□□□□ -0.21
CD164-203ENST00000324953 DHX57Q6P158 1386 aaKnown RBP13.75□□□□□ -0.21
CD164-203ENST00000324953 RBM19Q9Y4C8 960 aaKnown RBP13.75□□□□□ -0.21
CD164-203ENST00000324953 PEG3Q9GZU2 1588 aa13.75□□□□□ -0.21
CD164-203ENST00000324953 UBTFP17480 764 aaKnown RBP13.73□□□□□ -0.21
CD164-203ENST00000324953 PRKCSHP14314 528 aaPredicted RBP13.72□□□□□ -0.21
CD164-203ENST00000324953 VPS8Q8N3P4 1428 aa13.71□□□□□ -0.21
CD164-203ENST00000324953 BCANQ96GW7 911 aa13.7□□□□□ -0.22
CD164-203ENST00000324953 KIF21BO75037 1637 aa13.7□□□□□ -0.22
CD164-203ENST00000324953 CLIP1P30622 1438 aa13.69□□□□□ -0.22
CD164-203ENST00000324953 FKBP8Q14318 412 aa13.68□□□□□ -0.22
CD164-203ENST00000324953 MSH5O43196 834 aa13.67□□□□□ -0.22
CD164-203ENST00000324953 KCNH8Q96L42 1107 aa13.67□□□□□ -0.22
CD164-203ENST00000324953 CEP164Q9UPV0 1460 aa13.66□□□□□ -0.22
CD164-203ENST00000324953 PABPN1Q86U42 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
CD164-203ENST00000324953 BAZ1BQ9UIG0 1483 aaKnown RBP13.59□□□□□ -0.23
CD164-203ENST00000324953 FANCIQ9NVI1 1328 aa13.59□□□□□ -0.23
CD164-203ENST00000324953 CUX2O14529 1486 aa13.59□□□□□ -0.23
CD164-203ENST00000324953 ATAD2BQ9ULI0 1458 aa13.58□□□□□ -0.24
CD164-203ENST00000324953 NEFLP07196 543 aa13.54□□□□□ -0.24
CD164-203ENST00000324953 APLP2Q06481 763 aa13.54□□□□□ -0.24
CD164-203ENST00000324953 ITGAEP38570 1179 aa13.52□□□□□ -0.25
CD164-203ENST00000324953 RRBP1Q9P2E9 1410 aaKnown RBP13.51□□□□□ -0.25
CD164-203ENST00000324953 SYNJ1O43426 1573 aa13.5□□□□□ -0.25
CD164-203ENST00000324953 MYT1LQ9UL68 1186 aa13.5□□□□□ -0.25
CD164-203ENST00000324953 RAPGEF2Q9Y4G8 1499 aa13.49□□□□□ -0.25
CD164-203ENST00000324953 MAPKBP1O60336 1514 aa13.48□□□□□ -0.25
CD164-203ENST00000324953 CCER2I3L3R5 266 aa13.45□□□□□ -0.26
CD164-203ENST00000324953 PPP1R15AO75807 674 aaPredicted RBP13.44□□□□□ -0.26
CD164-203ENST00000324953 ERICH6Q7L0X2 663 aa13.43□□□□□ -0.26
CD164-203ENST00000324953 ARAP1Q96P48 1450 aa13.43□□□□□ -0.26
CD164-203ENST00000324953 DEKP35659 375 aaKnown RBP13.42□□□□□ -0.26
CD164-203ENST00000324953 WDR97A6NE52 1622 aa13.42□□□□□ -0.26
CD164-203ENST00000324953 DDX10Q13206 875 aaKnown RBP13.42□□□□□ -0.26
CD164-203ENST00000324953 TRIM52Q96A61 297 aa13.4□□□□□ -0.26
CD164-203ENST00000324953 TOP2BQ02880 1626 aa13.4□□□□□ -0.26
CD164-203ENST00000324953 KANK4Q5T7N3 995 aaPredicted RBP13.39□□□□□ -0.27
CD164-203ENST00000324953 CDK11AQ9UQ88 783 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms