RNA–Protein interactions for RNA: ENST00000520485.5

ARFGAP1-214, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-214ENST00000520485 NISCHQ9Y2I1 1504 aa54.23■■■■■ 6.27
ARFGAP1-214ENST00000520485 CCDC180Q9P1Z9 1646 aa47.78■■■■■ 5.24
ARFGAP1-214ENST00000520485 ABCC9O60706 1549 aa46.09■■■■■ 4.97
ARFGAP1-214ENST00000520485 ZCCHC6Q5VYS8 1495 aaKnown RBP45.39■■■■■ 4.86
ARFGAP1-214ENST00000520485 DCAF8L2P0C7V8 631 aa45.07■■■■■ 4.81
ARFGAP1-214ENST00000520485 DCAF1Q9Y4B6 1507 aa44.78■■■■■ 4.76
ARFGAP1-214ENST00000520485 NACADO15069 1562 aa44.68■■■■■ 4.74
ARFGAP1-214ENST00000520485 MYO15BQ96JP2 1530 aa44.59■■■■■ 4.73
ARFGAP1-214ENST00000520485 RB1CC1Q8TDY2 1594 aa44.56■■■■■ 4.72
ARFGAP1-214ENST00000520485 SCRIBQ14160 1630 aa43.89■■■■■ 4.62
ARFGAP1-214ENST00000520485 UNC13AQ9UPW8 1703 aa43.7■■■■■ 4.59
ARFGAP1-214ENST00000520485 SHROOM4Q9ULL8 1493 aa43.64■■■■■ 4.58
ARFGAP1-214ENST00000520485 BICRAQ9NZM4 1560 aa43.27■■■■■ 4.52
ARFGAP1-214ENST00000520485 PABPN1Q86U42 306 aaKnown RBP eCLIP43.22■■■■■ 4.516e-14■■■□□ 16.2
ARFGAP1-214ENST00000520485 CECR2Q9BXF3 1484 aa42.25■■■■■ 4.35
ARFGAP1-214ENST00000520485 EIF4G1Q04637 1599 aaKnown RBP42.04■■■■■ 4.32
ARFGAP1-214ENST00000520485 BAZ1AQ9NRL2 1556 aaPredicted RBP41.95■■■■■ 4.31
ARFGAP1-214ENST00000520485 SMARCA4P51532 1647 aa41.94■■■■■ 4.31
ARFGAP1-214ENST00000520485 MROH2BQ7Z745 1585 aa41.9■■■■■ 4.3
ARFGAP1-214ENST00000520485 RSF1Q96T23 1441 aaPredicted RBP41.68■■■■■ 4.26
ARFGAP1-214ENST00000520485 CC2D2AQ9P2K1 1620 aa41.68■■■■■ 4.26
ARFGAP1-214ENST00000520485 WIZO95785 1651 aa41.53■■■■■ 4.24
ARFGAP1-214ENST00000520485 DNAJC5BQ9UF47 199 aa41.46■■■■■ 4.23
ARFGAP1-214ENST00000520485 ATAD2BQ9ULI0 1458 aa41.45■■■■■ 4.23
ARFGAP1-214ENST00000520485 SUPT5HO00267 1087 aaKnown RBP41.41■■■■■ 4.22
ARFGAP1-214ENST00000520485 PEG3Q9GZU2 1588 aa41.41■■■■■ 4.22
ARFGAP1-214ENST00000520485 SMARCA2P51531 1590 aa41.39■■■■■ 4.22
ARFGAP1-214ENST00000520485 NCAPD3P42695 1498 aa41.2■■■■■ 4.19
ARFGAP1-214ENST00000520485 BAZ1BQ9UIG0 1483 aaKnown RBP41.19■■■■■ 4.18
ARFGAP1-214ENST00000520485 HMGXB3Q12766 1538 aa41.13■■■■■ 4.17
ARFGAP1-214ENST00000520485 TOP2AP11388 1531 aaKnown RBP41.06■■■■■ 4.16
ARFGAP1-214ENST00000520485 CCDC88BA6NC98 1476 aa40.58■■■■■ 4.09
ARFGAP1-214ENST00000520485 NESP48681 1621 aa40.17■■■■■ 4.02
ARFGAP1-214ENST00000520485 CADPSQ9ULU8 1353 aa40.08■■■■■ 4.01
ARFGAP1-214ENST00000520485 CFTRP13569 1480 aa40.04■■■■■ 4
ARFGAP1-214ENST00000520485 LAMC3Q9Y6N6 1575 aa40.01■■■■□ 3.99
ARFGAP1-214ENST00000520485 PRDM2Q13029 1718 aa39.87■■■■□ 3.97
ARFGAP1-214ENST00000520485 KIF21AQ7Z4S6 1674 aa39.71■■■■□ 3.95
ARFGAP1-214ENST00000520485 FANCD2Q9BXW9 1451 aa39.71■■■■□ 3.95
ARFGAP1-214ENST00000520485 PDS5BQ9NTI5 1447 aa39.69■■■■□ 3.94
ARFGAP1-214ENST00000520485 ERCC6Q03468 1493 aa39.6■■■■□ 3.93
ARFGAP1-214ENST00000520485 CEP164Q9UPV0 1460 aa39.57■■■■□ 3.92
ARFGAP1-214ENST00000520485 ABCC8Q09428 1581 aa39.49■■■■□ 3.91
ARFGAP1-214ENST00000520485 MRC2Q9UBG0 1479 aa39.31■■■■□ 3.88
ARFGAP1-214ENST00000520485 THOC2Q8NI27 1593 aaKnown RBP39.31■■■■□ 3.88
ARFGAP1-214ENST00000520485 URB2Q14146 1524 aaKnown RBP39.3■■■■□ 3.88
ARFGAP1-214ENST00000520485 WRNQ14191 1432 aaPredicted RBP eCLIP39.27■■■■□ 3.88
ARFGAP1-214ENST00000520485 CUX1P39880 1505 aa39.26■■■■□ 3.87
ARFGAP1-214ENST00000520485 SYNJ1O43426 1573 aa39.24■■■■□ 3.87
ARFGAP1-214ENST00000520485 DNMBPQ6XZF7 1577 aa39.19■■■■□ 3.86
ARFGAP1-214ENST00000520485 TOPBP1Q92547 1522 aa39.18■■■■□ 3.86
ARFGAP1-214ENST00000520485 WDR62O43379 1518 aa39.16■■■■□ 3.86
ARFGAP1-214ENST00000520485 TOP2BQ02880 1626 aa39.09■■■■□ 3.85
ARFGAP1-214ENST00000520485 BIVM-ERCC5R4GMW8 1640 aa39.09■■■■□ 3.85
ARFGAP1-214ENST00000520485 CHIC1Q5VXU3 224 aa39.07■■■■□ 3.84
ARFGAP1-214ENST00000520485 FGD5Q6ZNL6 1462 aa38.97■■■■□ 3.83
ARFGAP1-214ENST00000520485 TRIM41Q8WV44 630 aa38.95■■■■□ 3.83
ARFGAP1-214ENST00000520485 POLA1P09884 1462 aaPredicted RBP38.92■■■■□ 3.82
ARFGAP1-214ENST00000520485 CUX2O14529 1486 aa38.8■■■■□ 3.8
ARFGAP1-214ENST00000520485 RAD54L2Q9Y4B4 1467 aa38.8■■■■□ 3.8
ARFGAP1-214ENST00000520485 SOGA1O94964 1423 aa38.71■■■■□ 3.79
ARFGAP1-214ENST00000520485 TARBP1Q13395 1621 aaKnown RBP38.68■■■■□ 3.78
ARFGAP1-214ENST00000520485 IFT140Q96RY7 1462 aa38.64■■■■□ 3.78
ARFGAP1-214ENST00000520485 WDR97A6NE52 1622 aa38.61■■■■□ 3.77
ARFGAP1-214ENST00000520485 ABCA10Q8WWZ4 1543 aa38.55■■■■□ 3.76
ARFGAP1-214ENST00000520485 ZNF608Q9ULD9 1512 aaPredicted RBP38.53■■■■□ 3.76
ARFGAP1-214ENST00000520485 TDRD9Q8NDG6 1382 aaKnown RBP38.46■■■■□ 3.75
ARFGAP1-214ENST00000520485 RUSC2Q8N2Y8 1516 aa38.43■■■■□ 3.74
ARFGAP1-214ENST00000520485 EIF4G3O43432 1585 aaKnown RBP38.42■■■■□ 3.74
ARFGAP1-214ENST00000520485 AQRO60306 1485 aaKnown RBP eCLIP38.4■■■■□ 3.745e-7■■■■□ 23.1
ARFGAP1-214ENST00000520485 ABCA5Q8WWZ7 1642 aa38.4■■■■□ 3.74
ARFGAP1-214ENST00000520485 KIF27Q86VH2 1401 aa38.34■■■■□ 3.73
ARFGAP1-214ENST00000520485 GAPVD1Q14C86 1478 aa38.3■■■■□ 3.72
ARFGAP1-214ENST00000520485 FAM9AQ8IZU1 332 aaPredicted RBP38.3■■■■□ 3.72
ARFGAP1-214ENST00000520485 PBRM1Q86U86 1689 aa38.25■■■■□ 3.71
ARFGAP1-214ENST00000520485 GRIN2BQ13224 1484 aa38.15■■■■□ 3.7
ARFGAP1-214ENST00000520485 EEA1Q15075 1411 aa38.11■■■■□ 3.69
ARFGAP1-214ENST00000520485 SNAPC4Q5SXM2 1469 aa38.09■■■■□ 3.69
ARFGAP1-214ENST00000520485 ERICH3Q5RHP9 1530 aa38.08■■■■□ 3.69
ARFGAP1-214ENST00000520485 IGF1RP08069 1367 aa38.07■■■■□ 3.69
ARFGAP1-214ENST00000520485 CSRNP3Q8WYN3 585 aa37.99■■■■□ 3.67
ARFGAP1-214ENST00000520485 ADAMTS12P58397 1594 aa37.99■■■■□ 3.67
ARFGAP1-214ENST00000520485 CUL7Q14999 1698 aa37.95■■■■□ 3.67
ARFGAP1-214ENST00000520485 MAGI1Q96QZ7 1491 aaPredicted RBP37.93■■■■□ 3.66
ARFGAP1-214ENST00000520485 CARMIL1Q5VZK9 1371 aa37.88■■■■□ 3.65
ARFGAP1-214ENST00000520485 EHMT2Q96KQ7 1210 aa37.87■■■■□ 3.65
ARFGAP1-214ENST00000520485 FHAD1B1AJZ9 1412 aa37.85■■■■□ 3.65
ARFGAP1-214ENST00000520485 PRXQ9BXM0 1461 aa37.84■■■■□ 3.65
ARFGAP1-214ENST00000520485 SYNJ2O15056 1496 aa37.8■■■■□ 3.64
ARFGAP1-214ENST00000520485 KIF21BO75037 1637 aa37.78■■■■□ 3.64
ARFGAP1-214ENST00000520485 CHD1O14646 1710 aa37.78■■■■□ 3.64
ARFGAP1-214ENST00000520485 FBLN2P98095 1184 aa37.77■■■■□ 3.64
ARFGAP1-214ENST00000520485 RAPGEF2Q9Y4G8 1499 aa37.76■■■■□ 3.64
ARFGAP1-214ENST00000520485 CHMP7Q8WUX9 453 aaPredicted RBP37.71■■■■□ 3.63
ARFGAP1-214ENST00000520485 GRIN2AQ12879 1464 aa37.7■■■■□ 3.63
ARFGAP1-214ENST00000520485 GOLGA3Q08378 1498 aa37.64■■■■□ 3.62
ARFGAP1-214ENST00000520485 LOC105371045A0A1W2PR82 267 aa37.57■■■■□ 3.61
ARFGAP1-214ENST00000520485 CEP170Q5SW79 1584 aa37.54■■■■□ 3.6
ARFGAP1-214ENST00000520485 UBTFP17480 764 aaKnown RBP37.46■■■■□ 3.59
ARFGAP1-214ENST00000520485 NUP160Q12769 1436 aa37.46■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms