RNA–Protein interactions for RNA: ENST00000549047.5

ARFGAP1-221, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 5

Gene ARFGAP1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-221ENST00000549047 NISCHQ9Y2I1 1504 aa37.49■■■■□ 3.59
ARFGAP1-221ENST00000549047 CCDC180Q9P1Z9 1646 aa33.42■■■□□ 2.94
ARFGAP1-221ENST00000549047 ABCC9O60706 1549 aa33.17■■■□□ 2.9
ARFGAP1-221ENST00000549047 RB1CC1Q8TDY2 1594 aa31.68■■■□□ 2.66
ARFGAP1-221ENST00000549047 NACADO15069 1562 aa31.56■■■□□ 2.64
ARFGAP1-221ENST00000549047 DCAF8L2P0C7V8 631 aa31.53■■■□□ 2.64
ARFGAP1-221ENST00000549047 MYO15BQ96JP2 1530 aa31.25■■■□□ 2.59
ARFGAP1-221ENST00000549047 ZCCHC6Q5VYS8 1495 aaKnown RBP31.15■■■□□ 2.58
ARFGAP1-221ENST00000549047 DCAF1Q9Y4B6 1507 aa30.98■■■□□ 2.55
ARFGAP1-221ENST00000549047 PABPN1Q86U42 306 aaKnown RBP eCLIP30.97■■■□□ 2.555e-14■■■□□ 15.8
ARFGAP1-221ENST00000549047 UNC13AQ9UPW8 1703 aa30.87■■■□□ 2.53
ARFGAP1-221ENST00000549047 DNAJC5BQ9UF47 199 aa30.81■■■□□ 2.52
ARFGAP1-221ENST00000549047 BICRAQ9NZM4 1560 aa30.75■■■□□ 2.51
ARFGAP1-221ENST00000549047 SCRIBQ14160 1630 aa30.53■■■□□ 2.48
ARFGAP1-221ENST00000549047 SHROOM4Q9ULL8 1493 aa30.39■■■□□ 2.46
ARFGAP1-221ENST00000549047 EIF4G1Q04637 1599 aaKnown RBP29.98■■■□□ 2.39
ARFGAP1-221ENST00000549047 CC2D2AQ9P2K1 1620 aa29.93■■■□□ 2.38
ARFGAP1-221ENST00000549047 CECR2Q9BXF3 1484 aa29.84■■■□□ 2.37
ARFGAP1-221ENST00000549047 NCAPD3P42695 1498 aa29.17■■■□□ 2.26
ARFGAP1-221ENST00000549047 SMARCA4P51532 1647 aa29.15■■■□□ 2.26
ARFGAP1-221ENST00000549047 ATAD2BQ9ULI0 1458 aa29.13■■■□□ 2.25
ARFGAP1-221ENST00000549047 BAZ1AQ9NRL2 1556 aaPredicted RBP29.07■■■□□ 2.24
ARFGAP1-221ENST00000549047 SMARCA2P51531 1590 aa29.04■■■□□ 2.24
ARFGAP1-221ENST00000549047 HMGXB3Q12766 1538 aa28.95■■■□□ 2.23
ARFGAP1-221ENST00000549047 MROH2BQ7Z745 1585 aa28.9■■■□□ 2.22
ARFGAP1-221ENST00000549047 PEG3Q9GZU2 1588 aa28.87■■■□□ 2.21
ARFGAP1-221ENST00000549047 BAZ1BQ9UIG0 1483 aaKnown RBP28.86■■■□□ 2.21
ARFGAP1-221ENST00000549047 ERCC6Q03468 1493 aa28.61■■■□□ 2.17
ARFGAP1-221ENST00000549047 NESP48681 1621 aa28.58■■■□□ 2.17
ARFGAP1-221ENST00000549047 WIZO95785 1651 aa28.52■■■□□ 2.16
ARFGAP1-221ENST00000549047 RSF1Q96T23 1441 aaPredicted RBP28.45■■■□□ 2.15
ARFGAP1-221ENST00000549047 CUX2O14529 1486 aa28.43■■■□□ 2.14
ARFGAP1-221ENST00000549047 LAMC3Q9Y6N6 1575 aa28.41■■■□□ 2.14
ARFGAP1-221ENST00000549047 CADPSQ9ULU8 1353 aa28.3■■■□□ 2.12
ARFGAP1-221ENST00000549047 PDS5BQ9NTI5 1447 aa28.28■■■□□ 2.12
ARFGAP1-221ENST00000549047 TOP2AP11388 1531 aaKnown RBP28.23■■■□□ 2.11
ARFGAP1-221ENST00000549047 THOC2Q8NI27 1593 aaKnown RBP28.19■■■□□ 2.1
ARFGAP1-221ENST00000549047 KIF21AQ7Z4S6 1674 aa28.15■■■□□ 2.1
ARFGAP1-221ENST00000549047 CFTRP13569 1480 aa28.05■■■□□ 2.08
ARFGAP1-221ENST00000549047 DNAJC5Q9H3Z4 198 aa28.03■■■□□ 2.08
ARFGAP1-221ENST00000549047 MRC2Q9UBG0 1479 aa28.01■■■□□ 2.07
ARFGAP1-221ENST00000549047 FANCD2Q9BXW9 1451 aa27.97■■■□□ 2.07
ARFGAP1-221ENST00000549047 CEP164Q9UPV0 1460 aa27.97■■■□□ 2.07
ARFGAP1-221ENST00000549047 CCDC88BA6NC98 1476 aa27.92■■■□□ 2.06
ARFGAP1-221ENST00000549047 WDR62O43379 1518 aa27.91■■■□□ 2.06
ARFGAP1-221ENST00000549047 URB2Q14146 1524 aaKnown RBP27.72■■■□□ 2.03
ARFGAP1-221ENST00000549047 PRDM2Q13029 1718 aa27.66■■■□□ 2.02
ARFGAP1-221ENST00000549047 TOPBP1Q92547 1522 aa27.47■■□□□ 1.99
ARFGAP1-221ENST00000549047 SUPT5HO00267 1087 aaKnown RBP27.47■■□□□ 1.99
ARFGAP1-221ENST00000549047 ABCC8Q09428 1581 aa27.43■■□□□ 1.98
ARFGAP1-221ENST00000549047 IFT140Q96RY7 1462 aa27.39■■□□□ 1.98
ARFGAP1-221ENST00000549047 DNMBPQ6XZF7 1577 aa27.39■■□□□ 1.97
ARFGAP1-221ENST00000549047 ZNF608Q9ULD9 1512 aaPredicted RBP27.32■■□□□ 1.96
ARFGAP1-221ENST00000549047 POLA1P09884 1462 aaPredicted RBP27.23■■□□□ 1.95
ARFGAP1-221ENST00000549047 OSCARQ8IYS5 282 aa27.21■■□□□ 1.95
ARFGAP1-221ENST00000549047 TARBP1Q13395 1621 aaKnown RBP27.17■■□□□ 1.94
ARFGAP1-221ENST00000549047 EIF4G3O43432 1585 aaKnown RBP27.15■■□□□ 1.94
ARFGAP1-221ENST00000549047 CUX1P39880 1505 aa27.13■■□□□ 1.93
ARFGAP1-221ENST00000549047 AQRO60306 1485 aaKnown RBP eCLIP27.13■■□□□ 1.935e-7■■■■□ 23.1
ARFGAP1-221ENST00000549047 RAD54L2Q9Y4B4 1467 aa27.13■■□□□ 1.93
ARFGAP1-221ENST00000549047 SOGA1O94964 1423 aa27.11■■□□□ 1.93
ARFGAP1-221ENST00000549047 FGD5Q6ZNL6 1462 aa27.1■■□□□ 1.93
ARFGAP1-221ENST00000549047 TDRD9Q8NDG6 1382 aaKnown RBP27.03■■□□□ 1.92
ARFGAP1-221ENST00000549047 TRIM41Q8WV44 630 aa26.97■■□□□ 1.91
ARFGAP1-221ENST00000549047 WDR97A6NE52 1622 aa26.92■■□□□ 1.9
ARFGAP1-221ENST00000549047 FBLN2P98095 1184 aa26.89■■□□□ 1.9
ARFGAP1-221ENST00000549047 SNAPC4Q5SXM2 1469 aa26.86■■□□□ 1.89
ARFGAP1-221ENST00000549047 GRIN2BQ13224 1484 aa26.84■■□□□ 1.89
ARFGAP1-221ENST00000549047 WRNQ14191 1432 aaPredicted RBP eCLIP26.83■■□□□ 1.89
ARFGAP1-221ENST00000549047 CHD1O14646 1710 aa26.83■■□□□ 1.89
ARFGAP1-221ENST00000549047 ABCA10Q8WWZ4 1543 aa26.81■■□□□ 1.88
ARFGAP1-221ENST00000549047 GAPVD1Q14C86 1478 aa26.79■■□□□ 1.88
ARFGAP1-221ENST00000549047 MAGI1Q96QZ7 1491 aaPredicted RBP26.79■■□□□ 1.88
ARFGAP1-221ENST00000549047 RIMBP3CA6NJZ7 1639 aa26.76■■□□□ 1.87
ARFGAP1-221ENST00000549047 RIMBP3BA6NNM3 1639 aa26.76■■□□□ 1.87
ARFGAP1-221ENST00000549047 TOP2BQ02880 1626 aa26.76■■□□□ 1.87
ARFGAP1-221ENST00000549047 RIMBP3Q9UFD9 1639 aa26.76■■□□□ 1.87
ARFGAP1-221ENST00000549047 SYNJ1O43426 1573 aa26.75■■□□□ 1.87
ARFGAP1-221ENST00000549047 ARHGEF11O15085 1522 aa26.75■■□□□ 1.87
ARFGAP1-221ENST00000549047 CHMP7Q8WUX9 453 aaPredicted RBP26.75■■□□□ 1.87
ARFGAP1-221ENST00000549047 BIVM-ERCC5R4GMW8 1640 aa26.74■■□□□ 1.87
ARFGAP1-221ENST00000549047 ABCA5Q8WWZ7 1642 aa26.71■■□□□ 1.87
ARFGAP1-221ENST00000549047 SYNJ2O15056 1496 aa26.7■■□□□ 1.87
ARFGAP1-221ENST00000549047 PBRM1Q86U86 1689 aa26.66■■□□□ 1.86
ARFGAP1-221ENST00000549047 CLASP1Q7Z460 1538 aa26.6■■□□□ 1.85
ARFGAP1-221ENST00000549047 CYB5RLQ6IPT4 315 aa26.56■■□□□ 1.84
ARFGAP1-221ENST00000549047 ARAP1Q96P48 1450 aa26.52■■□□□ 1.84
ARFGAP1-221ENST00000549047 ADAMTS12P58397 1594 aa26.5■■□□□ 1.83
ARFGAP1-221ENST00000549047 GRIN2AQ12879 1464 aa26.49■■□□□ 1.83
ARFGAP1-221ENST00000549047 ERICH3Q5RHP9 1530 aa26.47■■□□□ 1.83
ARFGAP1-221ENST00000549047 FHAD1B1AJZ9 1412 aa26.47■■□□□ 1.83
ARFGAP1-221ENST00000549047 NUP160Q12769 1436 aa26.39■■□□□ 1.82
ARFGAP1-221ENST00000549047 CEP170Q5SW79 1584 aa26.36■■□□□ 1.81
ARFGAP1-221ENST00000549047 KIF27Q86VH2 1401 aa26.31■■□□□ 1.8
ARFGAP1-221ENST00000549047 IGF1RP08069 1367 aa26.25■■□□□ 1.79
ARFGAP1-221ENST00000549047 ERCC6L2Q5T890 1561 aa26.21■■□□□ 1.79
ARFGAP1-221ENST00000549047 SHROOM2Q13796 1616 aa26.18■■□□□ 1.78
ARFGAP1-221ENST00000549047 TRHP20396 242 aaPredicted RBP26.15■■□□□ 1.78
ARFGAP1-221ENST00000549047 JPH4Q96JJ6 628 aa26.13■■□□□ 1.77
ARFGAP1-221ENST00000549047 CUL7Q14999 1698 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms