RNA–Protein interactions for RNA: ENST00000353546.7

ARFGAP1-201, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ARFGAP1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-201ENST00000353546 NISCHQ9Y2I1 1504 aa33.02■■■□□ 2.88
ARFGAP1-201ENST00000353546 SHROOM4Q9ULL8 1493 aa28.87■■■□□ 2.21
ARFGAP1-201ENST00000353546 HRCP23327 699 aa28.66■■■□□ 2.18
ARFGAP1-201ENST00000353546 PELP1Q8IZL8 1130 aaKnown RBP28.5■■■□□ 2.15
ARFGAP1-201ENST00000353546 SUPT5HO00267 1087 aaKnown RBP28.36■■■□□ 2.13
ARFGAP1-201ENST00000353546 PPARGC1BQ86YN6 1023 aaKnown RBP28.16■■■□□ 2.1
ARFGAP1-201ENST00000353546 DCAF8L2P0C7V8 631 aa28.05■■■□□ 2.08
ARFGAP1-201ENST00000353546 ZCCHC6Q5VYS8 1495 aaKnown RBP27.98■■■□□ 2.07
ARFGAP1-201ENST00000353546 CCDC180Q9P1Z9 1646 aa27.79■■■□□ 2.04
ARFGAP1-201ENST00000353546 PCGF6Q9BYE7 350 aa27.78■■■□□ 2.04
ARFGAP1-201ENST00000353546 CHIC1Q5VXU3 224 aa27.57■■■□□ 2
ARFGAP1-201ENST00000353546 SCAF1Q9H7N4 1312 aaKnown RBP27.56■■■□□ 2
ARFGAP1-201ENST00000353546 MYO15BQ96JP2 1530 aa27.54■■■□□ 2
ARFGAP1-201ENST00000353546 MYT1Q01538 1121 aa27.53■■■□□ 2
ARFGAP1-201ENST00000353546 DCAF1Q9Y4B6 1507 aa27■■□□□ 1.91
ARFGAP1-201ENST00000353546 LOC105371045A0A1W2PR82 267 aa26.85■■□□□ 1.89
ARFGAP1-201ENST00000353546 TRIM26Q12899 539 aaPredicted RBP26.62■■□□□ 1.85
ARFGAP1-201ENST00000353546 ACIN1Q9UKV3 1341 aaKnown RBP26.6■■□□□ 1.85
ARFGAP1-201ENST00000353546 NEUROD1Q13562 356 aa26.56■■□□□ 1.84
ARFGAP1-201ENST00000353546 ZEB1P37275 1124 aaPredicted RBP26.54■■□□□ 1.84
ARFGAP1-201ENST00000353546 ABCC9O60706 1549 aa26.46■■□□□ 1.83
ARFGAP1-201ENST00000353546 GTF3C3Q9Y5Q9 886 aa26.46■■□□□ 1.83
ARFGAP1-201ENST00000353546 EHMT2Q96KQ7 1210 aa26.41■■□□□ 1.82
ARFGAP1-201ENST00000353546 SCRIBQ14160 1630 aa26.4■■□□□ 1.82
ARFGAP1-201ENST00000353546 FAM9AQ8IZU1 332 aaPredicted RBP26.33■■□□□ 1.81
ARFGAP1-201ENST00000353546 RSF1Q96T23 1441 aaPredicted RBP26.32■■□□□ 1.8
ARFGAP1-201ENST00000353546 TRIM41Q8WV44 630 aa26.24■■□□□ 1.79
ARFGAP1-201ENST00000353546 RB1CC1Q8TDY2 1594 aa26.09■■□□□ 1.77
ARFGAP1-201ENST00000353546 CENPBP07199 599 aaPredicted RBP26.07■■□□□ 1.76
ARFGAP1-201ENST00000353546 TTBK1Q5TCY1 1321 aaPredicted RBP26.01■■□□□ 1.75
ARFGAP1-201ENST00000353546 CECR2Q9BXF3 1484 aa25.91■■□□□ 1.74
ARFGAP1-201ENST00000353546 BCL11AQ9H165 835 aa25.9■■□□□ 1.74
ARFGAP1-201ENST00000353546 DIEXFQ68CQ4 756 aaKnown RBP25.77■■□□□ 1.72
ARFGAP1-201ENST00000353546 MROH2BQ7Z745 1585 aa25.73■■□□□ 1.71
ARFGAP1-201ENST00000353546 NACADO15069 1562 aa25.71■■□□□ 1.71
ARFGAP1-201ENST00000353546 WIZO95785 1651 aa25.63■■□□□ 1.69
ARFGAP1-201ENST00000353546 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.52■■□□□ 1.68
ARFGAP1-201ENST00000353546 YTHDC1Q96MU7 727 aaKnown RBP25.5■■□□□ 1.67
ARFGAP1-201ENST00000353546 ANP32EQ9BTT0 268 aa25.43■■□□□ 1.66
ARFGAP1-201ENST00000353546 BAZ1AQ9NRL2 1556 aaPredicted RBP25.42■■□□□ 1.66
ARFGAP1-201ENST00000353546 CCER1Q8TC90 406 aaPredicted RBP25.42■■□□□ 1.66
ARFGAP1-201ENST00000353546 PRKCSHP14314 528 aaPredicted RBP25.38■■□□□ 1.65
ARFGAP1-201ENST00000353546 EIF4G1Q04637 1599 aaKnown RBP25.34■■□□□ 1.65
ARFGAP1-201ENST00000353546 CSRNP3Q8WYN3 585 aa25.26■■□□□ 1.63
ARFGAP1-201ENST00000353546 ABCC8Q09428 1581 aa25.24■■□□□ 1.63
ARFGAP1-201ENST00000353546 PABPN1Q86U42 306 aaKnown RBP eCLIP25.22■■□□□ 1.632e-11■■■□□ 17.2
ARFGAP1-201ENST00000353546 CCDC88BA6NC98 1476 aa25.19■■□□□ 1.62
ARFGAP1-201ENST00000353546 TOP2AP11388 1531 aaKnown RBP25.15■■□□□ 1.62
ARFGAP1-201ENST00000353546 WRNQ14191 1432 aaPredicted RBP eCLIP25.11■■□□□ 1.61
ARFGAP1-201ENST00000353546 CEP162Q5TB80 1403 aa25.1■■□□□ 1.61
ARFGAP1-201ENST00000353546 MIER1Q8N108 512 aa25.1■■□□□ 1.61
ARFGAP1-201ENST00000353546 TSHZ2Q9NRE2 1034 aa25.1■■□□□ 1.61
ARFGAP1-201ENST00000353546 ZNF316A6NFI3 1004 aaPredicted RBP25.08■■□□□ 1.61
ARFGAP1-201ENST00000353546 SOGA1O94964 1423 aa25.07■■□□□ 1.6
ARFGAP1-201ENST00000353546 UNC13AQ9UPW8 1703 aa25.07■■□□□ 1.6
ARFGAP1-201ENST00000353546 SMARCA4P51532 1647 aa25.06■■□□□ 1.6
ARFGAP1-201ENST00000353546 SMARCA2P51531 1590 aa25.05■■□□□ 1.6
ARFGAP1-201ENST00000353546 TNIKQ9UKE5 1360 aa25.01■■□□□ 1.59
ARFGAP1-201ENST00000353546 SUPT16HQ9Y5B9 1047 aaKnown RBP25■■□□□ 1.59
ARFGAP1-201ENST00000353546 UBTFP17480 764 aaKnown RBP24.99■■□□□ 1.59
ARFGAP1-201ENST00000353546 RUSC2Q8N2Y8 1516 aa24.97■■□□□ 1.59
ARFGAP1-201ENST00000353546 EEA1Q15075 1411 aa24.89■■□□□ 1.58
ARFGAP1-201ENST00000353546 RANGAP1P46060 587 aaPredicted RBP24.88■■□□□ 1.57
ARFGAP1-201ENST00000353546 BICRAQ9NZM4 1560 aa24.8■■□□□ 1.56
ARFGAP1-201ENST00000353546 GOLGA3Q08378 1498 aa24.79■■□□□ 1.56
ARFGAP1-201ENST00000353546 CLSPNQ9HAW4 1339 aa24.73■■□□□ 1.55
ARFGAP1-201ENST00000353546 HNRNPUL2Q1KMD3 747 aaKnown RBP24.66■■□□□ 1.54
ARFGAP1-201ENST00000353546 CEP164Q9UPV0 1460 aa24.6■■□□□ 1.53
ARFGAP1-201ENST00000353546 ERICH6Q7L0X2 663 aa24.6■■□□□ 1.53
ARFGAP1-201ENST00000353546 SYNJ1O43426 1573 aa24.56■■□□□ 1.52
ARFGAP1-201ENST00000353546 CLIP1P30622 1438 aa24.56■■□□□ 1.52
ARFGAP1-201ENST00000353546 KIF21BO75037 1637 aa24.53■■□□□ 1.52
ARFGAP1-201ENST00000353546 PEG3Q9GZU2 1588 aa24.5■■□□□ 1.51
ARFGAP1-201ENST00000353546 VPS8Q8N3P4 1428 aa24.47■■□□□ 1.51
ARFGAP1-201ENST00000353546 APLP2Q06481 763 aa24.47■■□□□ 1.51
ARFGAP1-201ENST00000353546 BCANQ96GW7 911 aa24.42■■□□□ 1.5
ARFGAP1-201ENST00000353546 RBM19Q9Y4C8 960 aaKnown RBP24.42■■□□□ 1.5
ARFGAP1-201ENST00000353546 RAPGEF2Q9Y4G8 1499 aa24.42■■□□□ 1.5
ARFGAP1-201ENST00000353546 BAZ1BQ9UIG0 1483 aaKnown RBP24.39■■□□□ 1.49
ARFGAP1-201ENST00000353546 ATAD2BQ9ULI0 1458 aa24.37■■□□□ 1.49
ARFGAP1-201ENST00000353546 MSH5O43196 834 aa24.34■■□□□ 1.49
ARFGAP1-201ENST00000353546 ANO8Q9HCE9 1232 aaPredicted RBP24.28■■□□□ 1.48
ARFGAP1-201ENST00000353546 TOP2BQ02880 1626 aa24.19■■□□□ 1.46
ARFGAP1-201ENST00000353546 FKBP8Q14318 412 aa24.19■■□□□ 1.46
ARFGAP1-201ENST00000353546 DHX57Q6P158 1386 aaKnown RBP24.13■■□□□ 1.45
ARFGAP1-201ENST00000353546 KANK4Q5T7N3 995 aaPredicted RBP24.11■■□□□ 1.45
ARFGAP1-201ENST00000353546 ARAP1Q96P48 1450 aa24.09■■□□□ 1.45
ARFGAP1-201ENST00000353546 PRXQ9BXM0 1461 aa24.08■■□□□ 1.45
ARFGAP1-201ENST00000353546 ERICH3Q5RHP9 1530 aa24.07■■□□□ 1.44
ARFGAP1-201ENST00000353546 ITGAEP38570 1179 aa24.07■■□□□ 1.44
ARFGAP1-201ENST00000353546 BIVM-ERCC5R4GMW8 1640 aa24.06■■□□□ 1.44
ARFGAP1-201ENST00000353546 KCNH8Q96L42 1107 aa24.06■■□□□ 1.44
ARFGAP1-201ENST00000353546 DEKP35659 375 aaKnown RBP24.03■■□□□ 1.44
ARFGAP1-201ENST00000353546 SALL2Q9Y467 1007 aaPredicted RBP23.97■■□□□ 1.43
ARFGAP1-201ENST00000353546 RRBP1Q9P2E9 1410 aaKnown RBP23.95■■□□□ 1.42
ARFGAP1-201ENST00000353546 FANCIQ9NVI1 1328 aa23.93■■□□□ 1.42
ARFGAP1-201ENST00000353546 CUX1P39880 1505 aa23.92■■□□□ 1.42
ARFGAP1-201ENST00000353546 KIF27Q86VH2 1401 aa23.91■■□□□ 1.42
ARFGAP1-201ENST00000353546 CCNB3Q8WWL7 1395 aa23.87■■□□□ 1.41
ARFGAP1-201ENST00000353546 MYT1LQ9UL68 1186 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms