RNA–Protein interactions for RNA: ENST00000547204.5

ARFGAP1-220, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2 BASIC

Gene ARFGAP1, Length 1,327 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-220ENST00000547204 NISCHQ9Y2I1 1504 aa39.18■■■■□ 3.86
ARFGAP1-220ENST00000547204 CCDC180Q9P1Z9 1646 aa34.73■■■■□ 3.15
ARFGAP1-220ENST00000547204 ABCC9O60706 1549 aa34.46■■■■□ 3.11
ARFGAP1-220ENST00000547204 RB1CC1Q8TDY2 1594 aa32.93■■■□□ 2.86
ARFGAP1-220ENST00000547204 ZCCHC6Q5VYS8 1495 aaKnown RBP32.86■■■□□ 2.85
ARFGAP1-220ENST00000547204 NACADO15069 1562 aa32.77■■■□□ 2.84
ARFGAP1-220ENST00000547204 DCAF8L2P0C7V8 631 aa32.66■■■□□ 2.82
ARFGAP1-220ENST00000547204 DCAF1Q9Y4B6 1507 aa32.45■■■□□ 2.79
ARFGAP1-220ENST00000547204 MYO15BQ96JP2 1530 aa32.42■■■□□ 2.78
ARFGAP1-220ENST00000547204 UNC13AQ9UPW8 1703 aa32.12■■■□□ 2.73
ARFGAP1-220ENST00000547204 PABPN1Q86U42 306 aaKnown RBP eCLIP32.11■■■□□ 2.732e-13■■■□□ 15.6
ARFGAP1-220ENST00000547204 DNAJC5BQ9UF47 199 aa32■■■□□ 2.71
ARFGAP1-220ENST00000547204 BICRAQ9NZM4 1560 aa31.94■■■□□ 2.7
ARFGAP1-220ENST00000547204 SCRIBQ14160 1630 aa31.7■■■□□ 2.66
ARFGAP1-220ENST00000547204 SHROOM4Q9ULL8 1493 aa31.58■■■□□ 2.65
ARFGAP1-220ENST00000547204 EIF4G1Q04637 1599 aaKnown RBP31.15■■■□□ 2.58
ARFGAP1-220ENST00000547204 CC2D2AQ9P2K1 1620 aa31.12■■■□□ 2.57
ARFGAP1-220ENST00000547204 CECR2Q9BXF3 1484 aa31.01■■■□□ 2.55
ARFGAP1-220ENST00000547204 BAZ1AQ9NRL2 1556 aaPredicted RBP30.32■■■□□ 2.44
ARFGAP1-220ENST00000547204 SMARCA4P51532 1647 aa30.25■■■□□ 2.43
ARFGAP1-220ENST00000547204 NCAPD3P42695 1498 aa30.24■■■□□ 2.43
ARFGAP1-220ENST00000547204 MROH2BQ7Z745 1585 aa30.22■■■□□ 2.43
ARFGAP1-220ENST00000547204 ATAD2BQ9ULI0 1458 aa30.21■■■□□ 2.43
ARFGAP1-220ENST00000547204 RSF1Q96T23 1441 aaPredicted RBP30.2■■■□□ 2.43
ARFGAP1-220ENST00000547204 SUPT5HO00267 1087 aaKnown RBP30.15■■■□□ 2.42
ARFGAP1-220ENST00000547204 SMARCA2P51531 1590 aa30.15■■■□□ 2.42
ARFGAP1-220ENST00000547204 HMGXB3Q12766 1538 aa30.06■■■□□ 2.4
ARFGAP1-220ENST00000547204 WIZO95785 1651 aa29.96■■■□□ 2.39
ARFGAP1-220ENST00000547204 BAZ1BQ9UIG0 1483 aaKnown RBP29.95■■■□□ 2.39
ARFGAP1-220ENST00000547204 PEG3Q9GZU2 1588 aa29.95■■■□□ 2.39
ARFGAP1-220ENST00000547204 ERCC6Q03468 1493 aa29.74■■■□□ 2.35
ARFGAP1-220ENST00000547204 TOP2AP11388 1531 aaKnown RBP29.69■■■□□ 2.34
ARFGAP1-220ENST00000547204 NESP48681 1621 aa29.67■■■□□ 2.34
ARFGAP1-220ENST00000547204 CUX2O14529 1486 aa29.58■■■□□ 2.33
ARFGAP1-220ENST00000547204 LAMC3Q9Y6N6 1575 aa29.52■■■□□ 2.32
ARFGAP1-220ENST00000547204 PDS5BQ9NTI5 1447 aa29.35■■■□□ 2.29
ARFGAP1-220ENST00000547204 CADPSQ9ULU8 1353 aa29.35■■■□□ 2.29
ARFGAP1-220ENST00000547204 THOC2Q8NI27 1593 aaKnown RBP29.33■■■□□ 2.29
ARFGAP1-220ENST00000547204 CCDC88BA6NC98 1476 aa29.32■■■□□ 2.28
ARFGAP1-220ENST00000547204 KIF21AQ7Z4S6 1674 aa29.28■■■□□ 2.28
ARFGAP1-220ENST00000547204 DNAJC5Q9H3Z4 198 aa29.18■■■□□ 2.26
ARFGAP1-220ENST00000547204 MRC2Q9UBG0 1479 aa29.09■■■□□ 2.25
ARFGAP1-220ENST00000547204 CFTRP13569 1480 aa29.08■■■□□ 2.25
ARFGAP1-220ENST00000547204 CEP164Q9UPV0 1460 aa29.04■■■□□ 2.24
ARFGAP1-220ENST00000547204 FANCD2Q9BXW9 1451 aa29.02■■■□□ 2.24
ARFGAP1-220ENST00000547204 WDR62O43379 1518 aa29■■■□□ 2.23
ARFGAP1-220ENST00000547204 PRDM2Q13029 1718 aa28.77■■■□□ 2.2
ARFGAP1-220ENST00000547204 URB2Q14146 1524 aaKnown RBP28.76■■■□□ 2.19
ARFGAP1-220ENST00000547204 CHIC1Q5VXU3 224 aa28.69■■■□□ 2.18
ARFGAP1-220ENST00000547204 ABCC8Q09428 1581 aa28.57■■■□□ 2.16
ARFGAP1-220ENST00000547204 TOPBP1Q92547 1522 aa28.5■■■□□ 2.15
ARFGAP1-220ENST00000547204 WRNQ14191 1432 aaPredicted RBP eCLIP28.46■■■□□ 2.15
ARFGAP1-220ENST00000547204 IFT140Q96RY7 1462 aa28.45■■■□□ 2.14
ARFGAP1-220ENST00000547204 DNMBPQ6XZF7 1577 aa28.43■■■□□ 2.14
ARFGAP1-220ENST00000547204 TRIM41Q8WV44 630 aa28.43■■■□□ 2.14
ARFGAP1-220ENST00000547204 SYNJ1O43426 1573 aa28.36■■■□□ 2.13
ARFGAP1-220ENST00000547204 ZNF608Q9ULD9 1512 aaPredicted RBP28.36■■■□□ 2.13
ARFGAP1-220ENST00000547204 TOP2BQ02880 1626 aa28.31■■■□□ 2.12
ARFGAP1-220ENST00000547204 BIVM-ERCC5R4GMW8 1640 aa28.31■■■□□ 2.12
ARFGAP1-220ENST00000547204 CUX1P39880 1505 aa28.3■■■□□ 2.12
ARFGAP1-220ENST00000547204 OSCARQ8IYS5 282 aa28.24■■■□□ 2.11
ARFGAP1-220ENST00000547204 POLA1P09884 1462 aaPredicted RBP28.24■■■□□ 2.11
ARFGAP1-220ENST00000547204 EIF4G3O43432 1585 aaKnown RBP28.23■■■□□ 2.11
ARFGAP1-220ENST00000547204 TARBP1Q13395 1621 aaKnown RBP28.21■■■□□ 2.11
ARFGAP1-220ENST00000547204 AQRO60306 1485 aaKnown RBP eCLIP28.14■■■□□ 2.15e-7■■■■□ 23.1
ARFGAP1-220ENST00000547204 RAD54L2Q9Y4B4 1467 aa28.12■■■□□ 2.09
ARFGAP1-220ENST00000547204 FGD5Q6ZNL6 1462 aa28.11■■■□□ 2.09
ARFGAP1-220ENST00000547204 SOGA1O94964 1423 aa28.1■■■□□ 2.09
ARFGAP1-220ENST00000547204 TDRD9Q8NDG6 1382 aaKnown RBP28.01■■■□□ 2.07
ARFGAP1-220ENST00000547204 WDR97A6NE52 1622 aa27.97■■■□□ 2.07
ARFGAP1-220ENST00000547204 CHD1O14646 1710 aa27.92■■■□□ 2.06
ARFGAP1-220ENST00000547204 FBLN2P98095 1184 aa27.9■■■□□ 2.06
ARFGAP1-220ENST00000547204 EEA1Q15075 1411 aa27.89■■■□□ 2.05
ARFGAP1-220ENST00000547204 SNAPC4Q5SXM2 1469 aa27.88■■■□□ 2.05
ARFGAP1-220ENST00000547204 RIMBP3CA6NJZ7 1639 aa27.86■■■□□ 2.05
ARFGAP1-220ENST00000547204 RIMBP3BA6NNM3 1639 aa27.86■■■□□ 2.05
ARFGAP1-220ENST00000547204 RIMBP3Q9UFD9 1639 aa27.86■■■□□ 2.05
ARFGAP1-220ENST00000547204 GRIN2BQ13224 1484 aa27.84■■■□□ 2.05
ARFGAP1-220ENST00000547204 FAM9AQ8IZU1 332 aaPredicted RBP27.84■■■□□ 2.05
ARFGAP1-220ENST00000547204 RUSC2Q8N2Y8 1516 aa27.83■■■□□ 2.05
ARFGAP1-220ENST00000547204 ARHGEF11O15085 1522 aa27.82■■■□□ 2.04
ARFGAP1-220ENST00000547204 ABCA10Q8WWZ4 1543 aa27.82■■■□□ 2.04
ARFGAP1-220ENST00000547204 MAGI1Q96QZ7 1491 aaPredicted RBP27.82■■■□□ 2.04
ARFGAP1-220ENST00000547204 KIF27Q86VH2 1401 aa27.78■■■□□ 2.04
ARFGAP1-220ENST00000547204 GAPVD1Q14C86 1478 aa27.77■■■□□ 2.04
ARFGAP1-220ENST00000547204 CHMP7Q8WUX9 453 aaPredicted RBP27.73■■■□□ 2.03
ARFGAP1-220ENST00000547204 ABCA5Q8WWZ7 1642 aa27.73■■■□□ 2.03
ARFGAP1-220ENST00000547204 PBRM1Q86U86 1689 aa27.72■■■□□ 2.03
ARFGAP1-220ENST00000547204 SYNJ2O15056 1496 aa27.72■■■□□ 2.03
ARFGAP1-220ENST00000547204 CSRNP3Q8WYN3 585 aa27.68■■■□□ 2.02
ARFGAP1-220ENST00000547204 CLASP1Q7Z460 1538 aa27.64■■■□□ 2.02
ARFGAP1-220ENST00000547204 CYB5RLQ6IPT4 315 aa27.58■■■□□ 2.01
ARFGAP1-220ENST00000547204 ARAP1Q96P48 1450 aa27.57■■■□□ 2
ARFGAP1-220ENST00000547204 KIF21BO75037 1637 aa27.55■■■□□ 2
ARFGAP1-220ENST00000547204 IGF1RP08069 1367 aa27.54■■■□□ 2
ARFGAP1-220ENST00000547204 ADAMTS12P58397 1594 aa27.52■■■□□ 2
ARFGAP1-220ENST00000547204 LOC105371045A0A1W2PR82 267 aa27.51■■□□□ 1.99
ARFGAP1-220ENST00000547204 ERICH3Q5RHP9 1530 aa27.51■■□□□ 1.99
ARFGAP1-220ENST00000547204 PRXQ9BXM0 1461 aa27.49■■□□□ 1.99
ARFGAP1-220ENST00000547204 GRIN2AQ12879 1464 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms