RNA–Protein interactions for RNA: ENST00000536012.5

CCAR1-207, Transcript of cell division cycle and apoptosis regulator 1, humanhuman

TSL 1 (best)

Gene CCAR1, Length 2,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCAR1-207ENST00000536012 PELP1Q8IZL8 1130 aaKnown RBP12.74□□□□□ -0.37
CCAR1-207ENST00000536012 MYT1Q01538 1121 aa12.41□□□□□ -0.42
CCAR1-207ENST00000536012 HRCP23327 699 aa12.41□□□□□ -0.42
CCAR1-207ENST00000536012 NISCHQ9Y2I1 1504 aa12.27□□□□□ -0.45
CCAR1-207ENST00000536012 PPARGC1BQ86YN6 1023 aaKnown RBP12.01□□□□□ -0.49
CCAR1-207ENST00000536012 SCAF1Q9H7N4 1312 aaKnown RBP11.97□□□□□ -0.49
CCAR1-207ENST00000536012 TTBK1Q5TCY1 1321 aaPredicted RBP11.85□□□□□ -0.51
CCAR1-207ENST00000536012 PCGF6Q9BYE7 350 aa11.81□□□□□ -0.52
CCAR1-207ENST00000536012 MYO15BQ96JP2 1530 aa11.66□□□□□ -0.54
CCAR1-207ENST00000536012 AEBP2Q6ZN18 517 aaPredicted RBP11.66□□□□□ -0.54
CCAR1-207ENST00000536012 ACIN1Q9UKV3 1341 aaKnown RBP11.55□□□□□ -0.56
CCAR1-207ENST00000536012 DCAF1Q9Y4B6 1507 aa11.51□□□□□ -0.57
CCAR1-207ENST00000536012 ZEB1P37275 1124 aaPredicted RBP11.49□□□□□ -0.57
CCAR1-207ENST00000536012 NEUROD1Q13562 356 aa11.46□□□□□ -0.58
CCAR1-207ENST00000536012 BCL11AQ9H165 835 aa11.46□□□□□ -0.58
CCAR1-207ENST00000536012 CCDC180Q9P1Z9 1646 aa11.46□□□□□ -0.58
CCAR1-207ENST00000536012 GTF3C3Q9Y5Q9 886 aa11.43□□□□□ -0.58
CCAR1-207ENST00000536012 PRKCSHP14314 528 aaPredicted RBP11.39□□□□□ -0.59
CCAR1-207ENST00000536012 TRIM26Q12899 539 aaPredicted RBP11.39□□□□□ -0.59
CCAR1-207ENST00000536012 CENPBP07199 599 aaPredicted RBP11.38□□□□□ -0.59
CCAR1-207ENST00000536012 FAM9AQ8IZU1 332 aaPredicted RBP11.35□□□□□ -0.59
CCAR1-207ENST00000536012 CHIC1Q5VXU3 224 aa11.34□□□□□ -0.59
CCAR1-207ENST00000536012 SUPT5HO00267 1087 aaKnown RBP11.23□□□□□ -0.61
CCAR1-207ENST00000536012 ERICH6Q7L0X2 663 aa11.17□□□□□ -0.62
CCAR1-207ENST00000536012 ANP32EQ9BTT0 268 aa11.16□□□□□ -0.62
CCAR1-207ENST00000536012 APLP2Q06481 763 aa11.13□□□□□ -0.63
CCAR1-207ENST00000536012 SHROOM4Q9ULL8 1493 aa11.06□□□□□ -0.64
CCAR1-207ENST00000536012 LOC105371045A0A1W2PR82 267 aa11.05□□□□□ -0.64
CCAR1-207ENST00000536012 DIEXFQ68CQ4 756 aaKnown RBP11.05□□□□□ -0.64
CCAR1-207ENST00000536012 CSRNP3Q8WYN3 585 aa11.03□□□□□ -0.64
CCAR1-207ENST00000536012 TRIM41Q8WV44 630 aa10.9□□□□□ -0.66
CCAR1-207ENST00000536012 TSHZ2Q9NRE2 1034 aa10.89□□□□□ -0.67
CCAR1-207ENST00000536012 CLSPNQ9HAW4 1339 aa10.86□□□□□ -0.67
CCAR1-207ENST00000536012 YTHDC1Q96MU7 727 aaKnown RBP10.81□□□□□ -0.68
CCAR1-207ENST00000536012 SUPT16HQ9Y5B9 1047 aaKnown RBP10.8□□□□□ -0.68
CCAR1-207ENST00000536012 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.77□□□□□ -0.69
CCAR1-207ENST00000536012 CCER1Q8TC90 406 aaPredicted RBP10.77□□□□□ -0.69
CCAR1-207ENST00000536012 ZNF316A6NFI3 1004 aaPredicted RBP10.74□□□□□ -0.69
CCAR1-207ENST00000536012 MIER1Q8N108 512 aa10.72□□□□□ -0.69
CCAR1-207ENST00000536012 ANO8Q9HCE9 1232 aaPredicted RBP10.67□□□□□ -0.7
CCAR1-207ENST00000536012 UBE2Q2Q8WVN8 375 aa10.6□□□□□ -0.71
CCAR1-207ENST00000536012 RBM19Q9Y4C8 960 aaKnown RBP10.58□□□□□ -0.72
CCAR1-207ENST00000536012 MYT1LQ9UL68 1186 aa10.57□□□□□ -0.72
CCAR1-207ENST00000536012 MSH5O43196 834 aa10.55□□□□□ -0.72
CCAR1-207ENST00000536012 ZCCHC6Q5VYS8 1495 aaKnown RBP10.54□□□□□ -0.72
CCAR1-207ENST00000536012 ERICH6BQ5W0A0 696 aa10.52□□□□□ -0.73
CCAR1-207ENST00000536012 SALL2Q9Y467 1007 aaPredicted RBP10.5□□□□□ -0.73
CCAR1-207ENST00000536012 DEKP35659 375 aaKnown RBP10.47□□□□□ -0.73
CCAR1-207ENST00000536012 FANCIQ9NVI1 1328 aa10.46□□□□□ -0.73
CCAR1-207ENST00000536012 SLC24A1O60721 1099 aa10.4□□□□□ -0.74
CCAR1-207ENST00000536012 EIF5BO60841 1220 aaKnown RBP10.4□□□□□ -0.74
CCAR1-207ENST00000536012 CCDC136Q96JN2 1154 aa10.38□□□□□ -0.75
CCAR1-207ENST00000536012 BCANQ96GW7 911 aa10.36□□□□□ -0.75
CCAR1-207ENST00000536012 FKBP8Q14318 412 aa10.35□□□□□ -0.75
CCAR1-207ENST00000536012 WRNQ14191 1432 aaPredicted RBP eCLIP10.32□□□□□ -0.76
CCAR1-207ENST00000536012 PKNOX2Q96KN3 472 aa10.28□□□□□ -0.76
CCAR1-207ENST00000536012 DAXXQ9UER7 740 aaPredicted RBP10.27□□□□□ -0.76
CCAR1-207ENST00000536012 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.25□□□□□ -0.77
CCAR1-207ENST00000536012 ITGAEP38570 1179 aa10.24□□□□□ -0.77
CCAR1-207ENST00000536012 IL27Q8NEV9 243 aa10.24□□□□□ -0.77
CCAR1-207ENST00000536012 NEFLP07196 543 aa10.23□□□□□ -0.77
CCAR1-207ENST00000536012 EHMT2Q96KQ7 1210 aa10.23□□□□□ -0.77
CCAR1-207ENST00000536012 KCNH8Q96L42 1107 aa10.18□□□□□ -0.78
CCAR1-207ENST00000536012 CDK11AQ9UQ88 783 aaPredicted RBP10.18□□□□□ -0.78
CCAR1-207ENST00000536012 PLEKHG5O94827 1062 aa10.15□□□□□ -0.78
CCAR1-207ENST00000536012 RTN4Q9NQC3 1192 aaKnown RBP10.15□□□□□ -0.78
CCAR1-207ENST00000536012 NOP58Q9Y2X3 529 aaKnown RBP10.15□□□□□ -0.79
CCAR1-207ENST00000536012 NBR1Q14596 966 aa10.14□□□□□ -0.79
CCAR1-207ENST00000536012 C11orf95C9JLR9 678 aaPredicted RBP10.12□□□□□ -0.79
CCAR1-207ENST00000536012 PODXL2Q9NZ53 605 aa10.12□□□□□ -0.79
CCAR1-207ENST00000536012 ABCC9O60706 1549 aa10.1□□□□□ -0.79
CCAR1-207ENST00000536012 PAK3O75914 559 aaPredicted RBP10.1□□□□□ -0.79
CCAR1-207ENST00000536012 WASHC2AQ641Q2 1341 aa10.08□□□□□ -0.8
CCAR1-207ENST00000536012 CEP162Q5TB80 1403 aa10.07□□□□□ -0.8
CCAR1-207ENST00000536012 RB1CC1Q8TDY2 1594 aa10.07□□□□□ -0.8
CCAR1-207ENST00000536012 RTL5Q5HYW3 569 aaPredicted RBP10.07□□□□□ -0.8
CCAR1-207ENST00000536012 WASHC2CQ9Y4E1 1318 aa10.05□□□□□ -0.8
CCAR1-207ENST00000536012 HNRNPUL2Q1KMD3 747 aaKnown RBP10.05□□□□□ -0.8
CCAR1-207ENST00000536012 RSF1Q96T23 1441 aaPredicted RBP10.04□□□□□ -0.8
CCAR1-207ENST00000536012 DHX57Q6P158 1386 aaKnown RBP10.01□□□□□ -0.81
CCAR1-207ENST00000536012 ZMYND15Q9H091 742 aa10.01□□□□□ -0.81
CCAR1-207ENST00000536012 RSPH6AQ9H0K4 717 aa10.01□□□□□ -0.81
CCAR1-207ENST00000536012 CCER2I3L3R5 266 aa9.99□□□□□ -0.81
CCAR1-207ENST00000536012 GLIPR1L2Q4G1C9 344 aa9.99□□□□□ -0.81
CCAR1-207ENST00000536012 TNIKQ9UKE5 1360 aa9.99□□□□□ -0.81
CCAR1-207ENST00000536012 TRIM52Q96A61 297 aa9.99□□□□□ -0.81
CCAR1-207ENST00000536012 IPO9Q96P70 1041 aaKnown RBP9.98□□□□□ -0.81
CCAR1-207ENST00000536012 USP35Q9P2H5 1018 aa9.98□□□□□ -0.81
CCAR1-207ENST00000536012 NACADO15069 1562 aa9.98□□□□□ -0.81
CCAR1-207ENST00000536012 PPP4R2Q9NY27 417 aa9.97□□□□□ -0.81
CCAR1-207ENST00000536012 ZBTB47Q9UFB7 747 aaPredicted RBP9.94□□□□□ -0.82
CCAR1-207ENST00000536012 BRPF3Q9ULD4 1205 aa9.94□□□□□ -0.82
CCAR1-207ENST00000536012 TIMELESSQ9UNS1 1208 aa9.94□□□□□ -0.82
CCAR1-207ENST00000536012 PPP1R15AO75807 674 aaPredicted RBP9.92□□□□□ -0.82
CCAR1-207ENST00000536012 DCAF8L2P0C7V8 631 aa9.92□□□□□ -0.82
CCAR1-207ENST00000536012 ANP32AP39687 249 aaKnown RBP9.92□□□□□ -0.82
CCAR1-207ENST00000536012 IRX6P78412 446 aaPredicted RBP9.92□□□□□ -0.82
CCAR1-207ENST00000536012 VSIG10Q8N0Z9 540 aa9.92□□□□□ -0.82
CCAR1-207ENST00000536012 DDX10Q13206 875 aaKnown RBP9.9□□□□□ -0.82
CCAR1-207ENST00000536012 EEA1Q15075 1411 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms