RNA–Protein interactions for RNA: ENST00000370283.8

ARFGAP1-203, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARFGAP1, Length 3,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-203ENST00000370283 NISCHQ9Y2I1 1504 aa27.16■■□□□ 1.94
ARFGAP1-203ENST00000370283 SHROOM4Q9ULL8 1493 aa25.23■■□□□ 1.63
ARFGAP1-203ENST00000370283 SUPT5HO00267 1087 aaKnown RBP25.22■■□□□ 1.63
ARFGAP1-203ENST00000370283 PPARGC1BQ86YN6 1023 aaKnown RBP25.05■■□□□ 1.6
ARFGAP1-203ENST00000370283 HRCP23327 699 aa25.04■■□□□ 1.6
ARFGAP1-203ENST00000370283 PCGF6Q9BYE7 350 aa24.99■■□□□ 1.59
ARFGAP1-203ENST00000370283 MYO15BQ96JP2 1530 aa24.31■■□□□ 1.48
ARFGAP1-203ENST00000370283 CHIC1Q5VXU3 224 aa24.29■■□□□ 1.48
ARFGAP1-203ENST00000370283 LOC105371045A0A1W2PR82 267 aa24.16■■□□□ 1.46
ARFGAP1-203ENST00000370283 DCAF8L2P0C7V8 631 aa24.09■■□□□ 1.45
ARFGAP1-203ENST00000370283 PELP1Q8IZL8 1130 aaKnown RBP23.92■■□□□ 1.42
ARFGAP1-203ENST00000370283 SCAF1Q9H7N4 1312 aaKnown RBP23.88■■□□□ 1.41
ARFGAP1-203ENST00000370283 EHMT2Q96KQ7 1210 aa23.81■■□□□ 1.4
ARFGAP1-203ENST00000370283 TRIM26Q12899 539 aaPredicted RBP23.73■■□□□ 1.39
ARFGAP1-203ENST00000370283 FAM9AQ8IZU1 332 aaPredicted RBP23.5■■□□□ 1.35
ARFGAP1-203ENST00000370283 DCAF1Q9Y4B6 1507 aa23.39■■□□□ 1.33
ARFGAP1-203ENST00000370283 ZEB1P37275 1124 aaPredicted RBP23.36■■□□□ 1.33
ARFGAP1-203ENST00000370283 NEUROD1Q13562 356 aa23.3■■□□□ 1.32
ARFGAP1-203ENST00000370283 GTF3C3Q9Y5Q9 886 aa23.25■■□□□ 1.31
ARFGAP1-203ENST00000370283 ACIN1Q9UKV3 1341 aaKnown RBP23.19■■□□□ 1.3
ARFGAP1-203ENST00000370283 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.16■■□□□ 1.3
ARFGAP1-203ENST00000370283 TTBK1Q5TCY1 1321 aaPredicted RBP23.14■■□□□ 1.29
ARFGAP1-203ENST00000370283 CCDC180Q9P1Z9 1646 aa23.11■■□□□ 1.29
ARFGAP1-203ENST00000370283 CCER1Q8TC90 406 aaPredicted RBP23.05■■□□□ 1.28
ARFGAP1-203ENST00000370283 YTHDC1Q96MU7 727 aaKnown RBP23.05■■□□□ 1.28
ARFGAP1-203ENST00000370283 TRIM41Q8WV44 630 aa23.02■■□□□ 1.28
ARFGAP1-203ENST00000370283 ZCCHC6Q5VYS8 1495 aaKnown RBP22.98■■□□□ 1.27
ARFGAP1-203ENST00000370283 CENPBP07199 599 aaPredicted RBP22.94■■□□□ 1.26
ARFGAP1-203ENST00000370283 DIEXFQ68CQ4 756 aaKnown RBP22.93■■□□□ 1.26
ARFGAP1-203ENST00000370283 MYT1Q01538 1121 aa22.84■■□□□ 1.25
ARFGAP1-203ENST00000370283 MIER1Q8N108 512 aa22.39■■□□□ 1.17
ARFGAP1-203ENST00000370283 ZNF316A6NFI3 1004 aaPredicted RBP22.33■■□□□ 1.17
ARFGAP1-203ENST00000370283 ABCC9O60706 1549 aa22.28■■□□□ 1.16
ARFGAP1-203ENST00000370283 HNRNPUL2Q1KMD3 747 aaKnown RBP22.21■■□□□ 1.15
ARFGAP1-203ENST00000370283 RSF1Q96T23 1441 aaPredicted RBP22.11■■□□□ 1.13
ARFGAP1-203ENST00000370283 RANGAP1P46060 587 aaPredicted RBP22.03■■□□□ 1.12
ARFGAP1-203ENST00000370283 UBTFP17480 764 aaKnown RBP22.02■■□□□ 1.12
ARFGAP1-203ENST00000370283 RB1CC1Q8TDY2 1594 aa22.01■■□□□ 1.11
ARFGAP1-203ENST00000370283 BCANQ96GW7 911 aa22■■□□□ 1.11
ARFGAP1-203ENST00000370283 BCL11AQ9H165 835 aa21.93■■□□□ 1.1
ARFGAP1-203ENST00000370283 SUPT16HQ9Y5B9 1047 aaKnown RBP21.92■■□□□ 1.1
ARFGAP1-203ENST00000370283 ANP32EQ9BTT0 268 aa21.83■■□□□ 1.09
ARFGAP1-203ENST00000370283 TSHZ2Q9NRE2 1034 aa21.83■■□□□ 1.08
ARFGAP1-203ENST00000370283 SCRIBQ14160 1630 aa21.82■■□□□ 1.08
ARFGAP1-203ENST00000370283 CSRNP3Q8WYN3 585 aa21.81■■□□□ 1.08
ARFGAP1-203ENST00000370283 CEP162Q5TB80 1403 aa21.69■■□□□ 1.06
ARFGAP1-203ENST00000370283 KCNH8Q96L42 1107 aa21.66■■□□□ 1.06
ARFGAP1-203ENST00000370283 CECR2Q9BXF3 1484 aa21.63■■□□□ 1.05
ARFGAP1-203ENST00000370283 APLP2Q06481 763 aa21.62■■□□□ 1.05
ARFGAP1-203ENST00000370283 ITGAEP38570 1179 aa21.58■■□□□ 1.05
ARFGAP1-203ENST00000370283 FKBP8Q14318 412 aa21.58■■□□□ 1.05
ARFGAP1-203ENST00000370283 NACADO15069 1562 aa21.56■■□□□ 1.04
ARFGAP1-203ENST00000370283 SOGA1O94964 1423 aa21.54■■□□□ 1.04
ARFGAP1-203ENST00000370283 CCDC88BA6NC98 1476 aa21.49■■□□□ 1.03
ARFGAP1-203ENST00000370283 ABCC8Q09428 1581 aa21.47■■□□□ 1.03
ARFGAP1-203ENST00000370283 MROH2BQ7Z745 1585 aa21.44■■□□□ 1.02
ARFGAP1-203ENST00000370283 RUSC2Q8N2Y8 1516 aa21.41■■□□□ 1.02
ARFGAP1-203ENST00000370283 WRNQ14191 1432 aaPredicted RBP eCLIP21.4■■□□□ 1.02
ARFGAP1-203ENST00000370283 RBM19Q9Y4C8 960 aaKnown RBP21.38■■□□□ 1.01
ARFGAP1-203ENST00000370283 TRIM52Q96A61 297 aa21.37■■□□□ 1.01
ARFGAP1-203ENST00000370283 TNIKQ9UKE5 1360 aa21.36■■□□□ 1.01
ARFGAP1-203ENST00000370283 HIRIP3Q9BW71 556 aaPredicted RBP21.35■■□□□ 1.01
ARFGAP1-203ENST00000370283 WIZO95785 1651 aa21.35■■□□□ 1.01
ARFGAP1-203ENST00000370283 NEFLP07196 543 aa21.33■■□□□ 1.01
ARFGAP1-203ENST00000370283 DDX10Q13206 875 aaKnown RBP21.32■■□□□ 1
ARFGAP1-203ENST00000370283 CLSPNQ9HAW4 1339 aa21.29■■□□□ 1
ARFGAP1-203ENST00000370283 PABPN1Q86U42 306 aaKnown RBP eCLIP21.29■■□□□ 12e-7■■■□□ 17.3
ARFGAP1-203ENST00000370283 ERICH6Q7L0X2 663 aa21.28■■□□□ 1
ARFGAP1-203ENST00000370283 IRX6P78412 446 aaPredicted RBP21.26■□□□□ 0.99
ARFGAP1-203ENST00000370283 MSH5O43196 834 aa21.16■□□□□ 0.98
ARFGAP1-203ENST00000370283 CLIP1P30622 1438 aa21.14■□□□□ 0.97
ARFGAP1-203ENST00000370283 DHX57Q6P158 1386 aaKnown RBP21.12■□□□□ 0.97
ARFGAP1-203ENST00000370283 UNC13AQ9UPW8 1703 aa21.1■□□□□ 0.97
ARFGAP1-203ENST00000370283 KANK4Q5T7N3 995 aaPredicted RBP21.08■□□□□ 0.97
ARFGAP1-203ENST00000370283 GOLGA3Q08378 1498 aa21.08■□□□□ 0.97
ARFGAP1-203ENST00000370283 SIN3AQ96ST3 1273 aa21.03■□□□□ 0.96
ARFGAP1-203ENST00000370283 NBR1Q14596 966 aa20.97■□□□□ 0.95
ARFGAP1-203ENST00000370283 CDK11AQ9UQ88 783 aaPredicted RBP20.95■□□□□ 0.94
ARFGAP1-203ENST00000370283 VPS8Q8N3P4 1428 aa20.93■□□□□ 0.94
ARFGAP1-203ENST00000370283 ANP32CO43423 234 aa20.92■□□□□ 0.94
ARFGAP1-203ENST00000370283 PRKCSHP14314 528 aaPredicted RBP20.91■□□□□ 0.94
ARFGAP1-203ENST00000370283 ATP1B4Q9UN42 357 aaPredicted RBP20.89■□□□□ 0.94
ARFGAP1-203ENST00000370283 HNRNPUQ00839 825 aaKnown RBP eCLIP20.89■□□□□ 0.93
ARFGAP1-203ENST00000370283 BICRAQ9NZM4 1560 aa20.87■□□□□ 0.93
ARFGAP1-203ENST00000370283 DEKP35659 375 aaKnown RBP20.87■□□□□ 0.93
ARFGAP1-203ENST00000370283 CNGB1Q14028 1251 aaPredicted RBP20.86■□□□□ 0.93
ARFGAP1-203ENST00000370283 EEA1Q15075 1411 aa20.85■□□□□ 0.93
ARFGAP1-203ENST00000370283 FAM50AQ14320 339 aaKnown RBP20.84■□□□□ 0.93
ARFGAP1-203ENST00000370283 BAZ1AQ9NRL2 1556 aaPredicted RBP20.84■□□□□ 0.93
ARFGAP1-203ENST00000370283 RAPGEF2Q9Y4G8 1499 aa20.82■□□□□ 0.92
ARFGAP1-203ENST00000370283 CEP164Q9UPV0 1460 aa20.81■□□□□ 0.92
ARFGAP1-203ENST00000370283 EIF4G1Q04637 1599 aaKnown RBP20.8■□□□□ 0.92
ARFGAP1-203ENST00000370283 SENP3-EIF4A1A0A087X0R7 540 aa20.79■□□□□ 0.92
ARFGAP1-203ENST00000370283 ANO8Q9HCE9 1232 aaPredicted RBP20.77■□□□□ 0.92
ARFGAP1-203ENST00000370283 B4GALNT3Q6L9W6 998 aa20.76■□□□□ 0.91
ARFGAP1-203ENST00000370283 RTN4Q9NQC3 1192 aaKnown RBP20.74■□□□□ 0.91
ARFGAP1-203ENST00000370283 PPP1R15AO75807 674 aaPredicted RBP20.71■□□□□ 0.91
ARFGAP1-203ENST00000370283 RAB3GAP2Q9H2M9 1393 aa20.71■□□□□ 0.91
ARFGAP1-203ENST00000370283 SMARCA2P51531 1590 aa20.69■□□□□ 0.9
ARFGAP1-203ENST00000370283 SMARCA4P51532 1647 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms