RNA–Protein interactions for RNA: ENST00000524192.6

ARFGAP1-219, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 980 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-219ENST00000524192 NISCHQ9Y2I1 1504 aa36.56■■■■□ 3.44
ARFGAP1-219ENST00000524192 ABCC9O60706 1549 aa33.11■■■□□ 2.89
ARFGAP1-219ENST00000524192 CCDC180Q9P1Z9 1646 aa32.95■■■□□ 2.86
ARFGAP1-219ENST00000524192 RB1CC1Q8TDY2 1594 aa31.47■■■□□ 2.63
ARFGAP1-219ENST00000524192 DNAJC5BQ9UF47 199 aa31.26■■■□□ 2.59
ARFGAP1-219ENST00000524192 NACADO15069 1562 aa31.2■■■□□ 2.58
ARFGAP1-219ENST00000524192 DCAF8L2P0C7V8 631 aa30.95■■■□□ 2.55
ARFGAP1-219ENST00000524192 PABPN1Q86U42 306 aaKnown RBP eCLIP30.78■■■□□ 2.52
ARFGAP1-219ENST00000524192 UNC13AQ9UPW8 1703 aa30.75■■■□□ 2.51
ARFGAP1-219ENST00000524192 MYO15BQ96JP2 1530 aa30.71■■■□□ 2.51
ARFGAP1-219ENST00000524192 BICRAQ9NZM4 1560 aa30.53■■■□□ 2.48
ARFGAP1-219ENST00000524192 ZCCHC6Q5VYS8 1495 aaKnown RBP30.25■■■□□ 2.43
ARFGAP1-219ENST00000524192 DCAF1Q9Y4B6 1507 aa30.22■■■□□ 2.43
ARFGAP1-219ENST00000524192 SHROOM4Q9ULL8 1493 aa30.15■■■□□ 2.42
ARFGAP1-219ENST00000524192 SCRIBQ14160 1630 aa29.95■■■□□ 2.38
ARFGAP1-219ENST00000524192 CC2D2AQ9P2K1 1620 aa29.93■■■□□ 2.38
ARFGAP1-219ENST00000524192 CECR2Q9BXF3 1484 aa29.87■■■□□ 2.37
ARFGAP1-219ENST00000524192 EIF4G1Q04637 1599 aaKnown RBP29.81■■■□□ 2.36
ARFGAP1-219ENST00000524192 DNAJC5Q9H3Z4 198 aa28.93■■■□□ 2.22
ARFGAP1-219ENST00000524192 NCAPD3P42695 1498 aa28.8■■■□□ 2.2
ARFGAP1-219ENST00000524192 CUX2O14529 1486 aa28.68■■■□□ 2.18
ARFGAP1-219ENST00000524192 ATAD2BQ9ULI0 1458 aa28.66■■■□□ 2.18
ARFGAP1-219ENST00000524192 ERCC6Q03468 1493 aa28.63■■■□□ 2.17
ARFGAP1-219ENST00000524192 SMARCA2P51531 1590 aa28.59■■■□□ 2.17
ARFGAP1-219ENST00000524192 SMARCA4P51532 1647 aa28.58■■■□□ 2.17
ARFGAP1-219ENST00000524192 HMGXB3Q12766 1538 aa28.56■■■□□ 2.16
ARFGAP1-219ENST00000524192 BAZ1AQ9NRL2 1556 aaPredicted RBP28.41■■■□□ 2.14
ARFGAP1-219ENST00000524192 NESP48681 1621 aa28.37■■■□□ 2.13
ARFGAP1-219ENST00000524192 BAZ1BQ9UIG0 1483 aaKnown RBP28.37■■■□□ 2.13
ARFGAP1-219ENST00000524192 PEG3Q9GZU2 1588 aa28.32■■■□□ 2.12
ARFGAP1-219ENST00000524192 LAMC3Q9Y6N6 1575 aa28.2■■■□□ 2.1
ARFGAP1-219ENST00000524192 THOC2Q8NI27 1593 aaKnown RBP28.16■■■□□ 2.1
ARFGAP1-219ENST00000524192 MROH2BQ7Z745 1585 aa28.15■■■□□ 2.1
ARFGAP1-219ENST00000524192 PDS5BQ9NTI5 1447 aa28.04■■■□□ 2.08
ARFGAP1-219ENST00000524192 KIF21AQ7Z4S6 1674 aa28.03■■■□□ 2.08
ARFGAP1-219ENST00000524192 CADPSQ9ULU8 1353 aa27.9■■■□□ 2.06
ARFGAP1-219ENST00000524192 WIZO95785 1651 aa27.81■■■□□ 2.04
ARFGAP1-219ENST00000524192 MRC2Q9UBG0 1479 aa27.79■■■□□ 2.04
ARFGAP1-219ENST00000524192 WDR62O43379 1518 aa27.73■■■□□ 2.03
ARFGAP1-219ENST00000524192 CEP164Q9UPV0 1460 aa27.64■■■□□ 2.01
ARFGAP1-219ENST00000524192 FANCD2Q9BXW9 1451 aa27.57■■■□□ 2
ARFGAP1-219ENST00000524192 CFTRP13569 1480 aa27.53■■■□□ 2
ARFGAP1-219ENST00000524192 TRIM41Q8WV44 630 aa27.53■■■□□ 2
ARFGAP1-219ENST00000524192 RSF1Q96T23 1441 aaPredicted RBP27.49■■□□□ 1.99
ARFGAP1-219ENST00000524192 TOP2AP11388 1531 aaKnown RBP27.45■■□□□ 1.98
ARFGAP1-219ENST00000524192 URB2Q14146 1524 aaKnown RBP27.35■■□□□ 1.97
ARFGAP1-219ENST00000524192 OSCARQ8IYS5 282 aa27.34■■□□□ 1.97
ARFGAP1-219ENST00000524192 PRDM2Q13029 1718 aa27.27■■□□□ 1.96
ARFGAP1-219ENST00000524192 CCDC88BA6NC98 1476 aa27.13■■□□□ 1.93
ARFGAP1-219ENST00000524192 IFT140Q96RY7 1462 aa27.1■■□□□ 1.93
ARFGAP1-219ENST00000524192 ZNF608Q9ULD9 1512 aaPredicted RBP27.04■■□□□ 1.92
ARFGAP1-219ENST00000524192 TOPBP1Q92547 1522 aa27.02■■□□□ 1.92
ARFGAP1-219ENST00000524192 ABCC8Q09428 1581 aa27.01■■□□□ 1.91
ARFGAP1-219ENST00000524192 RIMBP3CA6NJZ7 1639 aa26.98■■□□□ 1.91
ARFGAP1-219ENST00000524192 RIMBP3BA6NNM3 1639 aa26.98■■□□□ 1.91
ARFGAP1-219ENST00000524192 RIMBP3Q9UFD9 1639 aa26.98■■□□□ 1.91
ARFGAP1-219ENST00000524192 DNMBPQ6XZF7 1577 aa26.92■■□□□ 1.9
ARFGAP1-219ENST00000524192 EIF4G3O43432 1585 aaKnown RBP26.9■■□□□ 1.9
ARFGAP1-219ENST00000524192 ARHGEF11O15085 1522 aa26.87■■□□□ 1.89
ARFGAP1-219ENST00000524192 TARBP1Q13395 1621 aaKnown RBP26.81■■□□□ 1.88
ARFGAP1-219ENST00000524192 AQRO60306 1485 aaKnown RBP eCLIP26.78■■□□□ 1.884e-8■■■■□ 20.6
ARFGAP1-219ENST00000524192 CHD1O14646 1710 aa26.76■■□□□ 1.87
ARFGAP1-219ENST00000524192 POLA1P09884 1462 aaPredicted RBP26.73■■□□□ 1.87
ARFGAP1-219ENST00000524192 CYB5RLQ6IPT4 315 aa26.69■■□□□ 1.86
ARFGAP1-219ENST00000524192 FBLN2P98095 1184 aa26.66■■□□□ 1.86
ARFGAP1-219ENST00000524192 RAD54L2Q9Y4B4 1467 aa26.62■■□□□ 1.85
ARFGAP1-219ENST00000524192 SOGA1O94964 1423 aa26.62■■□□□ 1.85
ARFGAP1-219ENST00000524192 TDRD9Q8NDG6 1382 aaKnown RBP26.58■■□□□ 1.84
ARFGAP1-219ENST00000524192 ARAP1Q96P48 1450 aa26.57■■□□□ 1.84
ARFGAP1-219ENST00000524192 WDR97A6NE52 1622 aa26.56■■□□□ 1.84
ARFGAP1-219ENST00000524192 FGD5Q6ZNL6 1462 aa26.53■■□□□ 1.84
ARFGAP1-219ENST00000524192 SNAPC4Q5SXM2 1469 aa26.49■■□□□ 1.83
ARFGAP1-219ENST00000524192 TRHP20396 242 aaPredicted RBP26.47■■□□□ 1.83
ARFGAP1-219ENST00000524192 CUX1P39880 1505 aa26.46■■□□□ 1.83
ARFGAP1-219ENST00000524192 MAGI1Q96QZ7 1491 aaPredicted RBP26.45■■□□□ 1.82
ARFGAP1-219ENST00000524192 CHMP7Q8WUX9 453 aaPredicted RBP26.45■■□□□ 1.82
ARFGAP1-219ENST00000524192 CLASP1Q7Z460 1538 aa26.44■■□□□ 1.82
ARFGAP1-219ENST00000524192 SYNJ1O43426 1573 aa26.42■■□□□ 1.82
ARFGAP1-219ENST00000524192 GRIN2BQ13224 1484 aa26.42■■□□□ 1.82
ARFGAP1-219ENST00000524192 SYNJ2O15056 1496 aa26.36■■□□□ 1.81
ARFGAP1-219ENST00000524192 PBRM1Q86U86 1689 aa26.3■■□□□ 1.8
ARFGAP1-219ENST00000524192 GAPVD1Q14C86 1478 aa26.3■■□□□ 1.8
ARFGAP1-219ENST00000524192 ABCA10Q8WWZ4 1543 aa26.24■■□□□ 1.79
ARFGAP1-219ENST00000524192 ABCA5Q8WWZ7 1642 aa26.21■■□□□ 1.79
ARFGAP1-219ENST00000524192 WRNQ14191 1432 aaPredicted RBP eCLIP26.08■■□□□ 1.77
ARFGAP1-219ENST00000524192 SUPT5HO00267 1087 aaKnown RBP26.08■■□□□ 1.77
ARFGAP1-219ENST00000524192 GRIN2AQ12879 1464 aa26.07■■□□□ 1.76
ARFGAP1-219ENST00000524192 ADAMTS12P58397 1594 aa26.02■■□□□ 1.76
ARFGAP1-219ENST00000524192 BIVM-ERCC5R4GMW8 1640 aa26.01■■□□□ 1.75
ARFGAP1-219ENST00000524192 TOP2BQ02880 1626 aa26■■□□□ 1.75
ARFGAP1-219ENST00000524192 NUP160Q12769 1436 aa25.99■■□□□ 1.75
ARFGAP1-219ENST00000524192 CEP170Q5SW79 1584 aa25.98■■□□□ 1.75
ARFGAP1-219ENST00000524192 ERCC6L2Q5T890 1561 aa25.98■■□□□ 1.75
ARFGAP1-219ENST00000524192 FHAD1B1AJZ9 1412 aa25.96■■□□□ 1.75
ARFGAP1-219ENST00000524192 SHROOM2Q13796 1616 aa25.92■■□□□ 1.74
ARFGAP1-219ENST00000524192 ERICH3Q5RHP9 1530 aa25.91■■□□□ 1.74
ARFGAP1-219ENST00000524192 AEBP2Q6ZN18 517 aaPredicted RBP25.89■■□□□ 1.74
ARFGAP1-219ENST00000524192 PRG4Q92954 1404 aaPredicted RBP25.76■■□□□ 1.71
ARFGAP1-219ENST00000524192 JPH4Q96JJ6 628 aa25.74■■□□□ 1.71
ARFGAP1-219ENST00000524192 KIF13AQ9H1H9 1805 aa25.7■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms