RNA–Protein interactions for RNA: ENST00000543229.5

CCAR1-215, Transcript of cell division cycle and apoptosis regulator 1, humanhuman

TSL 2

Gene CCAR1, Length 2,475 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCAR1-215ENST00000543229 NISCHQ9Y2I1 1504 aa11.43□□□□□ -0.58
CCAR1-215ENST00000543229 PELP1Q8IZL8 1130 aaKnown RBP10.76□□□□□ -0.69
CCAR1-215ENST00000543229 HRCP23327 699 aa10.57□□□□□ -0.72
CCAR1-215ENST00000543229 PPARGC1BQ86YN6 1023 aaKnown RBP10.45□□□□□ -0.74
CCAR1-215ENST00000543229 MYT1Q01538 1121 aa10.42□□□□□ -0.74
CCAR1-215ENST00000543229 SCAF1Q9H7N4 1312 aaKnown RBP10.33□□□□□ -0.76
CCAR1-215ENST00000543229 ABCC9O60706 1549 aa10.22□□□□□ -0.77
CCAR1-215ENST00000543229 PCGF6Q9BYE7 350 aa10.16□□□□□ -0.78
CCAR1-215ENST00000543229 DNAJC5BQ9UF47 199 aa9.98□□□□□ -0.81
CCAR1-215ENST00000543229 MYO15BQ96JP2 1530 aa9.92□□□□□ -0.82
CCAR1-215ENST00000543229 TTBK1Q5TCY1 1321 aaPredicted RBP9.91□□□□□ -0.82
CCAR1-215ENST00000543229 PRKCSHP14314 528 aaPredicted RBP9.9□□□□□ -0.82
CCAR1-215ENST00000543229 BCL11AQ9H165 835 aa9.9□□□□□ -0.82
CCAR1-215ENST00000543229 NEUROD1Q13562 356 aa9.87□□□□□ -0.83
CCAR1-215ENST00000543229 FAM9AQ8IZU1 332 aaPredicted RBP9.86□□□□□ -0.83
CCAR1-215ENST00000543229 ACIN1Q9UKV3 1341 aaKnown RBP9.86□□□□□ -0.83
CCAR1-215ENST00000543229 CCDC180Q9P1Z9 1646 aa9.85□□□□□ -0.83
CCAR1-215ENST00000543229 GTF3C3Q9Y5Q9 886 aa9.83□□□□□ -0.84
CCAR1-215ENST00000543229 CENPBP07199 599 aaPredicted RBP9.68□□□□□ -0.86
CCAR1-215ENST00000543229 ZCCHC6Q5VYS8 1495 aaKnown RBP9.66□□□□□ -0.86
CCAR1-215ENST00000543229 ZEB1P37275 1124 aaPredicted RBP9.65□□□□□ -0.86
CCAR1-215ENST00000543229 TRIM26Q12899 539 aaPredicted RBP9.62□□□□□ -0.87
CCAR1-215ENST00000543229 SUPT5HO00267 1087 aaKnown RBP9.62□□□□□ -0.87
CCAR1-215ENST00000543229 DCAF1Q9Y4B6 1507 aa9.61□□□□□ -0.87
CCAR1-215ENST00000543229 CHIC1Q5VXU3 224 aa9.6□□□□□ -0.87
CCAR1-215ENST00000543229 ANP32EQ9BTT0 268 aa9.54□□□□□ -0.88
CCAR1-215ENST00000543229 CSRNP3Q8WYN3 585 aa9.53□□□□□ -0.88
CCAR1-215ENST00000543229 RB1CC1Q8TDY2 1594 aa9.51□□□□□ -0.89
CCAR1-215ENST00000543229 LOC105371045A0A1W2PR82 267 aa9.5□□□□□ -0.89
CCAR1-215ENST00000543229 APLP2Q06481 763 aa9.5□□□□□ -0.89
CCAR1-215ENST00000543229 DNAJC5Q9H3Z4 198 aa9.5□□□□□ -0.89
CCAR1-215ENST00000543229 SHROOM4Q9ULL8 1493 aa9.49□□□□□ -0.89
CCAR1-215ENST00000543229 ERICH6Q7L0X2 663 aa9.47□□□□□ -0.89
CCAR1-215ENST00000543229 PABPN1Q86U42 306 aaKnown RBP eCLIP9.45□□□□□ -0.9
CCAR1-215ENST00000543229 DIEXFQ68CQ4 756 aaKnown RBP9.43□□□□□ -0.9
CCAR1-215ENST00000543229 YTHDC1Q96MU7 727 aaKnown RBP9.4□□□□□ -0.91
CCAR1-215ENST00000543229 TSHZ2Q9NRE2 1034 aa9.34□□□□□ -0.91
CCAR1-215ENST00000543229 NACADO15069 1562 aa9.33□□□□□ -0.92
CCAR1-215ENST00000543229 UNC13AQ9UPW8 1703 aa9.31□□□□□ -0.92
CCAR1-215ENST00000543229 ANO8Q9HCE9 1232 aaPredicted RBP9.28□□□□□ -0.92
CCAR1-215ENST00000543229 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.26□□□□□ -0.93
CCAR1-215ENST00000543229 DCAF8L2P0C7V8 631 aa9.26□□□□□ -0.93
CCAR1-215ENST00000543229 CECR2Q9BXF3 1484 aa9.24□□□□□ -0.93
CCAR1-215ENST00000543229 BICRAQ9NZM4 1560 aa9.24□□□□□ -0.93
CCAR1-215ENST00000543229 SUPT16HQ9Y5B9 1047 aaKnown RBP9.24□□□□□ -0.93
CCAR1-215ENST00000543229 TRIM41Q8WV44 630 aa9.23□□□□□ -0.93
CCAR1-215ENST00000543229 CC2D2AQ9P2K1 1620 aa9.2□□□□□ -0.94
CCAR1-215ENST00000543229 MIER1Q8N108 512 aa9.19□□□□□ -0.94
CCAR1-215ENST00000543229 CCER1Q8TC90 406 aaPredicted RBP9.19□□□□□ -0.94
CCAR1-215ENST00000543229 SALL2Q9Y467 1007 aaPredicted RBP9.11□□□□□ -0.95
CCAR1-215ENST00000543229 ZNF316A6NFI3 1004 aaPredicted RBP9.11□□□□□ -0.95
CCAR1-215ENST00000543229 CCDC136Q96JN2 1154 aa9.1□□□□□ -0.95
CCAR1-215ENST00000543229 MSH5O43196 834 aa9.09□□□□□ -0.95
CCAR1-215ENST00000543229 EIF4G1Q04637 1599 aaKnown RBP9.06□□□□□ -0.96
CCAR1-215ENST00000543229 UBE2Q2Q8WVN8 375 aa9.05□□□□□ -0.96
CCAR1-215ENST00000543229 RBM19Q9Y4C8 960 aaKnown RBP9.05□□□□□ -0.96
CCAR1-215ENST00000543229 SCRIBQ14160 1630 aa9.05□□□□□ -0.96
CCAR1-215ENST00000543229 CLSPNQ9HAW4 1339 aa9.02□□□□□ -0.97
CCAR1-215ENST00000543229 BCANQ96GW7 911 aa9.02□□□□□ -0.97
CCAR1-215ENST00000543229 DEKP35659 375 aaKnown RBP8.99□□□□□ -0.97
CCAR1-215ENST00000543229 CUX2O14529 1486 aa8.98□□□□□ -0.97
CCAR1-215ENST00000543229 RSF1Q96T23 1441 aaPredicted RBP8.97□□□□□ -0.97
CCAR1-215ENST00000543229 EHMT2Q96KQ7 1210 aa8.97□□□□□ -0.97
CCAR1-215ENST00000543229 POTEDQ86YR6 584 aa8.97□□□□□ -0.97
CCAR1-215ENST00000543229 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.96□□□□□ -0.98
CCAR1-215ENST00000543229 EIF5BO60841 1220 aaKnown RBP8.94□□□□□ -0.98
CCAR1-215ENST00000543229 SLC24A1O60721 1099 aa8.92□□□□□ -0.98
CCAR1-215ENST00000543229 PLEKHG5O94827 1062 aa8.92□□□□□ -0.98
CCAR1-215ENST00000543229 ITGAEP38570 1179 aa8.89□□□□□ -0.99
CCAR1-215ENST00000543229 FKBP8Q14318 412 aa8.88□□□□□ -0.99
CCAR1-215ENST00000543229 IL27Q8NEV9 243 aa8.88□□□□□ -0.99
CCAR1-215ENST00000543229 RTN4Q9NQC3 1192 aaKnown RBP8.87□□□□□ -0.99
CCAR1-215ENST00000543229 ERICH6BQ5W0A0 696 aa8.86□□□□□ -0.99
CCAR1-215ENST00000543229 ERCC6Q03468 1493 aa8.86□□□□□ -0.99
CCAR1-215ENST00000543229 PKNOX2Q96KN3 472 aa8.85□□□□□ -0.99
CCAR1-215ENST00000543229 FANCIQ9NVI1 1328 aa8.83□□□□□ -1
CCAR1-215ENST00000543229 MROH2BQ7Z745 1585 aa8.83□□□□□ -1
CCAR1-215ENST00000543229 MYT1LQ9UL68 1186 aa8.82□□□□□ -1
CCAR1-215ENST00000543229 AEBP2Q6ZN18 517 aaPredicted RBP8.81□□□□□ -1
CCAR1-215ENST00000543229 KCNH8Q96L42 1107 aa8.81□□□□□ -1
CCAR1-215ENST00000543229 BAZ1AQ9NRL2 1556 aaPredicted RBP8.8□□□□□ -1
CCAR1-215ENST00000543229 WIZO95785 1651 aa8.78□□□□□ -1
CCAR1-215ENST00000543229 NBR1Q14596 966 aa8.78□□□□□ -1
CCAR1-215ENST00000543229 PODXL2Q9NZ53 605 aa8.74□□□□□ -1.01
CCAR1-215ENST00000543229 DAXXQ9UER7 740 aaPredicted RBP8.73□□□□□ -1.01
CCAR1-215ENST00000543229 SMARCA4P51532 1647 aa8.72□□□□□ -1.01
CCAR1-215ENST00000543229 PAK3O75914 559 aaPredicted RBP8.71□□□□□ -1.02
CCAR1-215ENST00000543229 TOP2AP11388 1531 aaKnown RBP8.7□□□□□ -1.02
CCAR1-215ENST00000543229 NEFLP07196 543 aa8.68□□□□□ -1.02
CCAR1-215ENST00000543229 TIMELESSQ9UNS1 1208 aa8.65□□□□□ -1.02
CCAR1-215ENST00000543229 CDK11AQ9UQ88 783 aaPredicted RBP8.65□□□□□ -1.02
CCAR1-215ENST00000543229 NOP58Q9Y2X3 529 aaKnown RBP8.65□□□□□ -1.02
CCAR1-215ENST00000543229 NESP48681 1621 aa8.64□□□□□ -1.03
CCAR1-215ENST00000543229 SMARCA2P51531 1590 aa8.63□□□□□ -1.03
CCAR1-215ENST00000543229 THOC2Q8NI27 1593 aaKnown RBP8.63□□□□□ -1.03
CCAR1-215ENST00000543229 PEG3Q9GZU2 1588 aa8.62□□□□□ -1.03
CCAR1-215ENST00000543229 HNRNPUL2Q1KMD3 747 aaKnown RBP8.62□□□□□ -1.03
CCAR1-215ENST00000543229 NCAPD3P42695 1498 aa8.62□□□□□ -1.03
CCAR1-215ENST00000543229 ZMYND15Q9H091 742 aa8.61□□□□□ -1.03
CCAR1-215ENST00000543229 CCDC88BA6NC98 1476 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms