RNA–Protein interactions for RNA: ENST00000519531.5

ARFGAP1-211, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 3

Gene ARFGAP1, Length 1,490 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-211ENST00000519531 NISCHQ9Y2I1 1504 aa43.08■■■■■ 4.49
ARFGAP1-211ENST00000519531 CCDC180Q9P1Z9 1646 aa38.08■■■■□ 3.69
ARFGAP1-211ENST00000519531 ABCC9O60706 1549 aa37.06■■■■□ 3.52
ARFGAP1-211ENST00000519531 DCAF8L2P0C7V8 631 aa36.01■■■■□ 3.36
ARFGAP1-211ENST00000519531 ZCCHC6Q5VYS8 1495 aaKnown RBP35.95■■■■□ 3.35
ARFGAP1-211ENST00000519531 NACADO15069 1562 aa35.75■■■■□ 3.31
ARFGAP1-211ENST00000519531 RB1CC1Q8TDY2 1594 aa35.72■■■■□ 3.31
ARFGAP1-211ENST00000519531 MYO15BQ96JP2 1530 aa35.61■■■■□ 3.29
ARFGAP1-211ENST00000519531 DCAF1Q9Y4B6 1507 aa35.6■■■■□ 3.29
ARFGAP1-211ENST00000519531 UNC13AQ9UPW8 1703 aa34.9■■■■□ 3.18
ARFGAP1-211ENST00000519531 SCRIBQ14160 1630 aa34.87■■■■□ 3.17
ARFGAP1-211ENST00000519531 PABPN1Q86U42 306 aaKnown RBP eCLIP34.74■■■■□ 3.15
ARFGAP1-211ENST00000519531 BICRAQ9NZM4 1560 aa34.63■■■■□ 3.13
ARFGAP1-211ENST00000519531 SHROOM4Q9ULL8 1493 aa34.37■■■■□ 3.09
ARFGAP1-211ENST00000519531 DNAJC5BQ9UF47 199 aa33.73■■■□□ 2.99
ARFGAP1-211ENST00000519531 EIF4G1Q04637 1599 aaKnown RBP33.7■■■□□ 2.99
ARFGAP1-211ENST00000519531 CECR2Q9BXF3 1484 aa33.57■■■□□ 2.96
ARFGAP1-211ENST00000519531 CC2D2AQ9P2K1 1620 aa33.49■■■□□ 2.95
ARFGAP1-211ENST00000519531 BAZ1AQ9NRL2 1556 aaPredicted RBP33.35■■■□□ 2.93
ARFGAP1-211ENST00000519531 SMARCA4P51532 1647 aa33.34■■■□□ 2.93
ARFGAP1-211ENST00000519531 MROH2BQ7Z745 1585 aa33.23■■■□□ 2.91
ARFGAP1-211ENST00000519531 ATAD2BQ9ULI0 1458 aa33.1■■■□□ 2.89
ARFGAP1-211ENST00000519531 SMARCA2P51531 1590 aa33.05■■■□□ 2.88
ARFGAP1-211ENST00000519531 NCAPD3P42695 1498 aa33.01■■■□□ 2.88
ARFGAP1-211ENST00000519531 RSF1Q96T23 1441 aaPredicted RBP32.99■■■□□ 2.87
ARFGAP1-211ENST00000519531 PEG3Q9GZU2 1588 aa32.97■■■□□ 2.87
ARFGAP1-211ENST00000519531 WIZO95785 1651 aa32.89■■■□□ 2.86
ARFGAP1-211ENST00000519531 BAZ1BQ9UIG0 1483 aaKnown RBP32.85■■■□□ 2.85
ARFGAP1-211ENST00000519531 HMGXB3Q12766 1538 aa32.85■■■□□ 2.85
ARFGAP1-211ENST00000519531 TOP2AP11388 1531 aaKnown RBP32.54■■■□□ 2.8
ARFGAP1-211ENST00000519531 SUPT5HO00267 1087 aaKnown RBP32.52■■■□□ 2.8
ARFGAP1-211ENST00000519531 CCDC88BA6NC98 1476 aa32.2■■■□□ 2.74
ARFGAP1-211ENST00000519531 NESP48681 1621 aa32.17■■■□□ 2.74
ARFGAP1-211ENST00000519531 CADPSQ9ULU8 1353 aa32.09■■■□□ 2.73
ARFGAP1-211ENST00000519531 LAMC3Q9Y6N6 1575 aa32.06■■■□□ 2.72
ARFGAP1-211ENST00000519531 CFTRP13569 1480 aa31.96■■■□□ 2.71
ARFGAP1-211ENST00000519531 ERCC6Q03468 1493 aa31.91■■■□□ 2.7
ARFGAP1-211ENST00000519531 PDS5BQ9NTI5 1447 aa31.88■■■□□ 2.69
ARFGAP1-211ENST00000519531 KIF21AQ7Z4S6 1674 aa31.74■■■□□ 2.67
ARFGAP1-211ENST00000519531 FANCD2Q9BXW9 1451 aa31.73■■■□□ 2.67
ARFGAP1-211ENST00000519531 PRDM2Q13029 1718 aa31.67■■■□□ 2.66
ARFGAP1-211ENST00000519531 CEP164Q9UPV0 1460 aa31.64■■■□□ 2.66
ARFGAP1-211ENST00000519531 THOC2Q8NI27 1593 aaKnown RBP31.53■■■□□ 2.64
ARFGAP1-211ENST00000519531 MRC2Q9UBG0 1479 aa31.52■■■□□ 2.64
ARFGAP1-211ENST00000519531 URB2Q14146 1524 aaKnown RBP31.39■■■□□ 2.62
ARFGAP1-211ENST00000519531 CUX2O14529 1486 aa31.38■■■□□ 2.61
ARFGAP1-211ENST00000519531 WDR62O43379 1518 aa31.38■■■□□ 2.61
ARFGAP1-211ENST00000519531 TOPBP1Q92547 1522 aa31.26■■■□□ 2.59
ARFGAP1-211ENST00000519531 ABCC8Q09428 1581 aa31.23■■■□□ 2.59
ARFGAP1-211ENST00000519531 DNMBPQ6XZF7 1577 aa31.22■■■□□ 2.59
ARFGAP1-211ENST00000519531 CUX1P39880 1505 aa31.15■■■□□ 2.58
ARFGAP1-211ENST00000519531 WRNQ14191 1432 aaPredicted RBP eCLIP31.09■■■□□ 2.57
ARFGAP1-211ENST00000519531 POLA1P09884 1462 aaPredicted RBP31.02■■■□□ 2.56
ARFGAP1-211ENST00000519531 FGD5Q6ZNL6 1462 aa30.99■■■□□ 2.55
ARFGAP1-211ENST00000519531 SYNJ1O43426 1573 aa30.98■■■□□ 2.55
ARFGAP1-211ENST00000519531 IFT140Q96RY7 1462 aa30.96■■■□□ 2.55
ARFGAP1-211ENST00000519531 TOP2BQ02880 1626 aa30.95■■■□□ 2.54
ARFGAP1-211ENST00000519531 SOGA1O94964 1423 aa30.92■■■□□ 2.54
ARFGAP1-211ENST00000519531 BIVM-ERCC5R4GMW8 1640 aa30.92■■■□□ 2.54
ARFGAP1-211ENST00000519531 RAD54L2Q9Y4B4 1467 aa30.91■■■□□ 2.54
ARFGAP1-211ENST00000519531 TARBP1Q13395 1621 aaKnown RBP30.85■■■□□ 2.53
ARFGAP1-211ENST00000519531 ZNF608Q9ULD9 1512 aaPredicted RBP30.83■■■□□ 2.53
ARFGAP1-211ENST00000519531 TDRD9Q8NDG6 1382 aaKnown RBP30.73■■■□□ 2.51
ARFGAP1-211ENST00000519531 AQRO60306 1485 aaKnown RBP eCLIP30.72■■■□□ 2.515e-7■■■■□ 23.1
ARFGAP1-211ENST00000519531 ABCA10Q8WWZ4 1543 aa30.69■■■□□ 2.5
ARFGAP1-211ENST00000519531 EIF4G3O43432 1585 aaKnown RBP30.68■■■□□ 2.5
ARFGAP1-211ENST00000519531 TRIM41Q8WV44 630 aa30.66■■■□□ 2.5
ARFGAP1-211ENST00000519531 WDR97A6NE52 1622 aa30.66■■■□□ 2.5
ARFGAP1-211ENST00000519531 GAPVD1Q14C86 1478 aa30.55■■■□□ 2.48
ARFGAP1-211ENST00000519531 CHIC1Q5VXU3 224 aa30.51■■■□□ 2.48
ARFGAP1-211ENST00000519531 ABCA5Q8WWZ7 1642 aa30.51■■■□□ 2.48
ARFGAP1-211ENST00000519531 GRIN2BQ13224 1484 aa30.49■■■□□ 2.47
ARFGAP1-211ENST00000519531 SNAPC4Q5SXM2 1469 aa30.42■■■□□ 2.46
ARFGAP1-211ENST00000519531 PBRM1Q86U86 1689 aa30.41■■■□□ 2.46
ARFGAP1-211ENST00000519531 KIF27Q86VH2 1401 aa30.41■■■□□ 2.46
ARFGAP1-211ENST00000519531 MAGI1Q96QZ7 1491 aaPredicted RBP30.35■■■□□ 2.45
ARFGAP1-211ENST00000519531 FBLN2P98095 1184 aa30.34■■■□□ 2.45
ARFGAP1-211ENST00000519531 ERICH3Q5RHP9 1530 aa30.32■■■□□ 2.44
ARFGAP1-211ENST00000519531 RUSC2Q8N2Y8 1516 aa30.28■■■□□ 2.44
ARFGAP1-211ENST00000519531 CHMP7Q8WUX9 453 aaPredicted RBP30.27■■■□□ 2.44
ARFGAP1-211ENST00000519531 IGF1RP08069 1367 aa30.27■■■□□ 2.44
ARFGAP1-211ENST00000519531 SYNJ2O15056 1496 aa30.25■■■□□ 2.43
ARFGAP1-211ENST00000519531 CHD1O14646 1710 aa30.22■■■□□ 2.43
ARFGAP1-211ENST00000519531 OSCARQ8IYS5 282 aa30.22■■■□□ 2.43
ARFGAP1-211ENST00000519531 ADAMTS12P58397 1594 aa30.21■■■□□ 2.43
ARFGAP1-211ENST00000519531 FHAD1B1AJZ9 1412 aa30.2■■■□□ 2.43
ARFGAP1-211ENST00000519531 CARMIL1Q5VZK9 1371 aa30.1■■■□□ 2.41
ARFGAP1-211ENST00000519531 GRIN2AQ12879 1464 aa30.1■■■□□ 2.41
ARFGAP1-211ENST00000519531 CUL7Q14999 1698 aa30.09■■■□□ 2.41
ARFGAP1-211ENST00000519531 FAM9AQ8IZU1 332 aaPredicted RBP30.07■■■□□ 2.4
ARFGAP1-211ENST00000519531 DNAJC5Q9H3Z4 198 aa30.07■■■□□ 2.4
ARFGAP1-211ENST00000519531 EEA1Q15075 1411 aa30.02■■■□□ 2.4
ARFGAP1-211ENST00000519531 CSRNP3Q8WYN3 585 aa30.01■■■□□ 2.4
ARFGAP1-211ENST00000519531 RAPGEF2Q9Y4G8 1499 aa29.93■■■□□ 2.38
ARFGAP1-211ENST00000519531 NUP160Q12769 1436 aa29.93■■■□□ 2.38
ARFGAP1-211ENST00000519531 CEP170Q5SW79 1584 aa29.93■■■□□ 2.38
ARFGAP1-211ENST00000519531 PRXQ9BXM0 1461 aa29.9■■■□□ 2.38
ARFGAP1-211ENST00000519531 CLASP1Q7Z460 1538 aa29.89■■■□□ 2.38
ARFGAP1-211ENST00000519531 KIAA0586Q9BVV6 1533 aa29.75■■■□□ 2.35
ARFGAP1-211ENST00000519531 EHMT2Q96KQ7 1210 aa29.7■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms